Ggra10127.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra10127.t1
Unique NameGgra10127.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length310
Homology
BLAST of Ggra10127.t1 vs. uniprot
Match: A0A0D3BW92 (Uncharacterized protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3BW92_BRAOL)

HSP 1 Score: 111 bits (277), Expect = 8.010e-25
Identity = 71/214 (33.18%), Postives = 115/214 (53.74%), Query Frame = 0
Query:   29 RNIDKGRSTWIKDYLGSESVYSLKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQVKVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTDELQHMSELYDEVGEEENRYTARQKGRRKDVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVEMQRQRHFQEDADE-EEGE 241
            RN ++G      DY      Y    FRRRF + + LF ++  D + N  + + Q+++   +LG  +  K    +  L    + D +D+  R+ A + R  V  F   I+ L+G  YL RRP+ D+LQ               +  RQ+  RKDVER FGVLQARFG++++  R+W + +I ++ + C++LHN+IVE +R ++ Q D  E ++GE
Sbjct:   54 RNREEGNLRLWNDYFSDTPTYPENLFRRRFRMNKPLFMRIV-DRLSNEVQFFRQKKDGLGRLGLSTLQKCTVAICVLAYGSALDTVDEYLRLGASTTRLCVENFVEAIINLFGDEYL-RRPTPDDLQRPKAAL---------FAQRQEAVRKDVERAFGVLQARFGIIKNTARIWDKVKIRKIMRACIILHNMIVEDERDQNTQFDVSEFQQGE 256          
BLAST of Ggra10127.t1 vs. uniprot
Match: uncharacterized protein LOC122013865 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B8D81 (uncharacterized protein LOC122013865 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B8D81)

HSP 1 Score: 102 bits (253), Expect = 8.500e-22
Identity = 65/205 (31.71%), Postives = 107/205 (52.20%), Query Frame = 0
Query:   29 RNIDKGRSTWIKDYLGSESVYSLKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQVKVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTDELQHMSELYDE---VGEEENRYTARQKGRRKDVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVEMQRQRH 230
            RN  +G      DY    S+Y    FRRRF + R +F ++ N+ VEN+   + QRRN    LG  S  KV   LR L      D +D+  R+   ++   +  F   ++ ++G  YL + P+ + +  +  + ++    G +   + + Q+  RKDVER FGVLQARF ++R   R + + E+  +   C++LHN+IVE +R  +
Sbjct:   53 RNPLEGHIRLFNDYFADPSIYPPNIFRRRFQMNRDIFLRILNN-VENHESYFVQRRNAVGTLGLSSLQKVTAALRILAYGVGADLMDEYVRIGETTVIKSMKLFAKAVISIFGDEYL-QSPNNNGIARLLAVGEKRGFPGRKRQLFASAQESTRKDVERAFGVLQARFAIVRGPARYFCQSELKDIMMACIILHNMIVEDERNSY 255          
BLAST of Ggra10127.t1 vs. uniprot
Match: A0A0D3D7A9 (Myb-like domain-containing protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3D7A9_BRAOL)

HSP 1 Score: 102 bits (255), Expect = 5.790e-21
Identity = 73/237 (30.80%), Postives = 127/237 (53.59%), Query Frame = 0
Query:   18 TRKRRGRLRGSRNIDKGRSTWIKDYLGSESVYSLKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQVKVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTDELQHMSELYDEVGEE----ENRYTARQKGRRK-------DVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVEMQRQRHFQEDADE-EEGEI 242
            T+K+R R    RN ++G +    DY   +  +    FRRRF + + LF ++ + L E+ P  + QRR+   + G     K    +R L    + D +D+  R+   +    +  F   I+QL+G  YL RRP+ ++LQ + ++ ++ G      +  Y  + K + +       DVER FGVLQARF ++++ V  W +++I ++ +TC++LHN+IV  +R  + Q D  E EEG++
Sbjct:  175 TKKQRKRAYIERNHEEGHNRLWNDYFSEDPTFPAHLFRRRFRMNKELFMRIVHRLSEDVP-FFRQRRDATGRYGLAPLQKCTAAIRLLAYGYAADTVDEYLRLGESTAISCLENFTEGIIQLFGDEYL-RRPTPEDLQRLLDIGEKHGFPGMVLKQSYLLKFKKQPEKMWSALLDVERAFGVLQARFAIVKNPVLSWDKEKIGKIMRTCIILHNMIVGNERDGYTQYDMSEFEEGDV 409          
BLAST of Ggra10127.t1 vs. uniprot
Match: A0A0D3AV18 (Uncharacterized protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3AV18_BRAOL)

HSP 1 Score: 94.7 bits (234), Expect = 6.900e-19
Identity = 72/246 (29.27%), Postives = 122/246 (49.59%), Query Frame = 0
Query:   41 DYLGSESVYSLKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQVKVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTDELQHMSELYDEVG-------------EEENRYTA----------------RQKGRRKDVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVEMQRQRHFQEDADE-EEGE--------IDFLTEL 248
            DY      Y    FRRRF + + LF ++  D + N  E++ Q+++   +L      K  T +R L    + DD+D+  R+   + R  V  F   I+ L+G  YL RRP+  +LQ + E+ + +G             E +N  TA                 Q+  RKDV+R+FG+LQARF ++++    W + +I ++ + C++LHN+IVE +R  + Q +  E ++GE        +DF T++
Sbjct:    7 DYFSKTPTYPQNLFRRRFRMNKPLFMRIV-DRLSNEVELFRQKKDALGRLSLSPLQKYTTAIRVLAYGTAADDVDEYVRLGETTTRSCVEHFVEGIIYLFGDEYL-RRPTPTDLQRLLEVGEFLGFPEMIGSIDRMHWEWKNCPTAWKGQYSRGPKAVLFAQHQEAVRKDVKRVFGILQARFAIVKNPALFWDKAKIGKIMRACIILHNMIVEDERDGYTQFNVSEFQQGEETGSSHVDLDFSTDM 250          
BLAST of Ggra10127.t1 vs. uniprot
Match: uncharacterized protein LOC117617462 n=1 Tax=Prunus dulcis TaxID=3755 RepID=UPI001482C7F2 (uncharacterized protein LOC117617462 n=1 Tax=Prunus dulcis TaxID=3755 RepID=UPI001482C7F2)

HSP 1 Score: 94.7 bits (234), Expect = 7.470e-19
Identity = 67/231 (29.00%), Postives = 117/231 (50.65%), Query Frame = 0
Query:   15 IGKTRKRRGRLRGSRNIDKGRSTWIKDYLGSESVYSLKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQVKVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTD--ELQHMSELYDEVGEEENR----YTARQKGRRKDVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVEMQRQRHFQEDADEEE 239
            +G+  K R R    RN+       + DY       +  DFRR F + + LF+++ ND+V + P  + Q++    + G   + K+    R L    S D  ++  R+   +    + KF   +  LYG  YL      D  +L H + L   +   +N     +T  Q+  +KDVER FG+LQAR+ ++R   R+W ED +  +  TC++LHN+IVE + + + ++++D+E+
Sbjct:   48 VGRVYKNREREDRHRNL-------MSDYFVERPHCNTTDFRRLFRMRKELFYRILNDVVNHEP-YFGQKKKGLGRQGLSPEQKLTAVFRMLAWGCSVDVTNEYCRLGESTALESLCKFCCAVEALYGQWYLKSPNPADLYKLLHEATLVKTISSSDNPKKSLFTQIQEAYKKDVERAFGILQARWAIVRCPARMWCEDNLHSIMMTCIILHNMIVEDEFE-YVEDESDDED 269          
BLAST of Ggra10127.t1 vs. uniprot
Match: uncharacterized protein LOC103330778 n=1 Tax=Prunus mume TaxID=102107 RepID=UPI00046DEAB8 (uncharacterized protein LOC103330778 n=1 Tax=Prunus mume TaxID=102107 RepID=UPI00046DEAB8)

HSP 1 Score: 95.1 bits (235), Expect = 9.700e-19
Identity = 63/212 (29.72%), Postives = 106/212 (50.00%), Query Frame = 0
Query:   39 IKDYLGSESVYSLKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQVKVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTDEL---------QHMSELY-----------------DEVGEEENRYTARQKGRRKDVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVE 224
             ++Y  +  +Y L DFR RF + R LF ++   +V  + + + Q+ +   KLG   QVK+   +R L  + + +  DD  ++   +      +F++ +  LYG+ YL++  STD L         Q+  + Y                 D  G +   ++  Q+  RKDVER FG+LQARF V+      WY ++I  V +TC++LHN+I+E
Sbjct:   65 FENYFSNHPLYPLSDFRNRFRMRRELFNRIMEQIVP-FDDYFKQKPDTTGKLGFSPQVKITAAMRMLAYSTTANLNDDYLKIVETTSFEACKRFYHAVNNLYGAEYLHK--STDVLRVRYYLNGKQYKQDYYLADGIYPKWNTIVQSFSDPQGRQHQLFSMMQEAYRKDVERAFGILQARFAVVAMSAYQWYREDIWEVLKTCIILHNMIIE 273          
BLAST of Ggra10127.t1 vs. uniprot
Match: A0A0D2ZUP6 (Uncharacterized protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D2ZUP6_BRAOL)

HSP 1 Score: 93.2 bits (230), Expect = 3.680e-18
Identity = 75/271 (27.68%), Postives = 129/271 (47.60%), Query Frame = 0
Query:    9 LNNFQKIGKTRKRRGRLRGSRNIDKGRSTWIKDYLGSESVYSLKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQV---KVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTDELQHMSELYDEVG---------------------EEENRYTARQKGRRKDVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVEMQRQR-------HFQEDADEEEGEIDFLTEL 248
            LNN   I + ++R+ R+   RN ++G      DY      YS K FRRRF + + LF ++ + L           R   D  G  S     K    +R L    + D +D+  R++  + R  ++ F   I+ L+G  YL RRP+ ++L+ +  + +E G                     E+++ +   Q+  RKDVER F V+QARF V+++  +LW +++I  +   C+++HN+IVE +R          FQE  + +   ++ L+ L
Sbjct:   26 LNNSDPIPEPKERKKRIFIERNREEGHIQLWNDYFSENPTYSTKFFRRRFRMNKELFLRIVHHLSTEILYF----RPSEDATGRSSLSPLQKCTAAIRQLAYGGAADTVDEYIRLAETTARKCLHNFTAGIITLFGGEYL-RRPTPEDLERLLHIGEERGFPGMIGSIDSTFIQYIRLPQTEKQSLFAKSQESVRKDVERAFKVMQARFAVVKNPSKLWDKEKIGNIMIACIIIHNMIVEDERSSFTQYNKFEFQEREEVDTFSVNMLSNL 291          
BLAST of Ggra10127.t1 vs. uniprot
Match: A0A2N9FH56 (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FH56_FAGSY)

HSP 1 Score: 92.0 bits (227), Expect = 1.320e-17
Identity = 67/239 (28.03%), Postives = 116/239 (48.54%), Query Frame = 0
Query:   34 GRSTWIKDYLGSESVYSLKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQVKVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTDELQHMSELYDEVG--------------------------EEENRYTAR-QKGRRKDVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVEMQRQRHFQEDADEEEGEIDFL 245
            G     +DY    SV+    FRRRF + R LF+ L + L  + P  + Q+RN    LG  S  K+   LR LT   + D  D+  R+   +    + KF   ++ ++   YL R P+++++  +  + ++ G                          E + ++ AR Q+  RKDVE  FG+LQARF ++R+ VR W E  +  + + C++LHN+I+E +R  +  +  D+ E  ++ +
Sbjct:   62 GEERLFRDYFAKYSVFLPHLFRRRFWMNRPLFFHLQSTLEAHDP-YFIQKRNAARTLGLSSLQKMTAALRILTYGVAVDSTDEYVRIGESTAVESLKKFVKAVVNIFSEEYL-RSPNSNDIASLLAVNEKRGFSGMLGSIDCMHWKWKNCLTAWKAPLEAKKKHFARVQEACRKDVECAFGILQARFSIVREPVRFWDEATLNNIMKACIILHNMIIEDERNPNEVQQGDDYEQVLESI 298          
BLAST of Ggra10127.t1 vs. uniprot
Match: A0A0D3A674 (Uncharacterized protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3A674_BRAOL)

HSP 1 Score: 90.9 bits (224), Expect = 1.860e-17
Identity = 66/239 (27.62%), Postives = 120/239 (50.21%), Query Frame = 0
Query:    7 LLLNNFQKIGKTRKRRGRLRGSRNIDKGRSTWIKDYLGSESVYSLKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQVKVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTDELQHMSELYDEVG----------EEENRYTARQKGRRKDVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVEMQRQRHFQEDA 235
            L + + ++  K RK+R  +   RN ++G +    DY      Y    FRRRF + + LF  +  D + +  + + ++++   +    +  K    +R L    + D +D+  ++   + R  V  F   I+ L+G  YL RRP+  +LQ + ++ +  G           +   +  RQ+  RKDVER FGVLQARF ++++    W + +I ++ + C++LHN+IVE +R  + Q D 
Sbjct:   36 LAIGHQEEARKQRKKRAYI--ERNREEGHNRLWDDYFSETPTYPENFFRRRFRMNKRLFMHIV-DRLSSEVQYFQEKKDGIGRNSLSALQKCTAAIRVLAYGSAADTVDEYLQLGETTTRLCVQNFVEGIIYLFGDEYL-RRPTPADLQRLLDIGEHRGFPGMIGSIDWPKAVLFAQRQEAVRKDVERAFGVLQARFAIVKNPALFWDKVKIGKIMRACIILHNMIVEDERDGYTQFDV 270          
BLAST of Ggra10127.t1 vs. uniprot
Match: uncharacterized protein LOC101293181 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005C9990A (uncharacterized protein LOC101293181 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005C9990A)

HSP 1 Score: 91.7 bits (226), Expect = 2.270e-17
Identity = 70/238 (29.41%), Postives = 117/238 (49.16%), Query Frame = 0
Query:   39 IKDYLGSESVYSLKDFRRRFGVPRVLFWKL--HNDLVENYPEIWTQRRNCYDKLGHPS---QVKVLTFLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPSTDELQ---------HMSELYDEVG-----------------------EEENRYTARQKGRRKDVERLFGVLQARFGVLRDDVRLWYEDEIIRVSQTCVVLHNLIVEMQRQRHFQEDADEEE 239
            + DY  ++ VY ++ F+RR+ + R +F ++  H   V+ Y   + Q ++C   +GHPS     K+   LR L T  S D LD+  RM   ++   + +F   I  L     L R P  D +          H++E+  E G                       E+E  ++ +Q+  RKDVER FG+LQARF ++R   R W +D +  +   C++LHN+IVE +R  ++  ++D++E
Sbjct:   75 LNDYFVADLVYLVETFKRRYRMRRKVFLRMLEHVQTVDPY---FRQSQDC---VGHPSFSPHQKLTCALRMLATACSADSLDESFRMLESTVIENLGRFCRTINDLTV---LGRSPLFDVVTAGQSPQLNYHVNEIPYEFGYYLADGIYPKWAIIVQYIRQPENEQEEYFSTKQEAYRKDVERAFGILQARFAIIRQPARGWDKDSLSTIMLACIILHNMIVEDERDDYYHGESDDDE 303          
The following BLAST results are available for this feature:
BLAST of Ggra10127.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D3BW928.010e-2533.18Uncharacterized protein n=1 Tax=Brassica oleracea ... [more]
uncharacterized protein LOC122013865 n=1 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B8D818.500e-2231.71uncharacterized protein LOC122013865 n=1 Tax=Zingi... [more]
A0A0D3D7A95.790e-2130.80Myb-like domain-containing protein n=1 Tax=Brassic... [more]
A0A0D3AV186.900e-1929.27Uncharacterized protein n=1 Tax=Brassica oleracea ... [more]
uncharacterized protein LOC117617462 n=1 Tax=Prunus dulcis TaxID=3755 RepID=UPI001482C7F27.470e-1929.00uncharacterized protein LOC117617462 n=1 Tax=Prunu... [more]
uncharacterized protein LOC103330778 n=1 Tax=Prunus mume TaxID=102107 RepID=UPI00046DEAB89.700e-1929.72uncharacterized protein LOC103330778 n=1 Tax=Prunu... [more]
A0A0D2ZUP63.680e-1827.68Uncharacterized protein n=1 Tax=Brassica oleracea ... [more]
A0A2N9FH561.320e-1728.03Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A0D3A6741.860e-1727.62Uncharacterized protein n=1 Tax=Brassica oleracea ... [more]
uncharacterized protein LOC101293181 n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005C9990A2.270e-1729.41uncharacterized protein LOC101293181 n=1 Tax=Fraga... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006912Harbinger transposase-derived proteinPFAMPF04827Plant_trancoord: 163..228
e-value: 7.1E-16
score: 58.4
IPR045249Putative nuclease HARBI1-likePANTHERPTHR22930UNCHARACTERIZEDcoord: 165..241
coord: 22..128
NoneNo IPR availablePANTHERPTHR22930:SF197HARBINGER TRANSPOSASE-DERIVED PROTEIN-RELATEDcoord: 165..241
coord: 22..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000113_piloncontigtig00000113_pilon:271033..272330 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra10127.t1Ggra10127.t1Gracilaria gracilis GNS1m malemRNAtig00000113_pilon 271033..272330 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra10127.t1 ID=Ggra10127.t1|Name=Ggra10127.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=310bp
MFARTLLLLNNFQKIGKTRKRRGRLRGSRNIDKGRSTWIKDYLGSESVYS
LKDFRRRFGVPRVLFWKLHNDLVENYPEIWTQRRNCYDKLGHPSQVKVLT
FLRFLTTNRSYDDLDDGSRMSAQSIRFYVYKFWYYILQLYGSHYLNRRPS
TDELQHMSELYDEVGEEENRYTARQKGRRKDVERLFGVLQARFGVLRDDV
RLWYEDEIIRVSQTCVVLHNLIVEMQRQRHFQEDADEEEGEIDFLTELYD
MQVTENGEPQQQTTAQGHSSEYLMNDGQSENFLVRYGFLTSGLGHEALKK
DFIIRLGSE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006912Harbinger_derived_prot
IPR045249HARBI1-like