Ggra11116.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra11116.t1
Unique NameGgra11116.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length337
Homology
[Close]
BLAST of Ggra11116.t1 vs. uniprot
Match: A0A2V3J3F0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3F0_9FLOR)

HSP 1 Score: 509 bits (1310), Expect = 1.310e-179
Identity = 251/337 (74.48%), Postives = 285/337 (84.57%), Query Frame = 0 
Query:    1 MVFRWLFSSSSSSATPSAHPPPDESAVPDEHVLRPGDSTPAAMEDLSRPLRVSLNAIAPALVEARPELKLSEYDMSRGQYAINVLALTHNAVRVEMADMWGDIIPGLEKRSQPNAPLPLTQQDSDDLRKWWSGFARFALTASLVDDMVTKKAFSDVYVGFDKDTKQIAALFHKVQEKNNVYMEMAFKKMAKAVDSFEHDVSENGCAQLVKSWQMLATMIGDVFTESERLVESIDRWVRNPFEYKDLEKQAAKIFTSKKRWGDDDAKRGEMVIMLCRWLTEEELMREWMFRNLTKKELKCIDKWMNGYQDGRLIIIDRLYQKKAANDSS-DMELDAIP 336
            MVFRWLFSS          P   E    DEH LRPGDSTPAA+EDLSRPL+V L+AI P L+E  PELKLS+YD+SRGQYA NVLALTHNAVRVEM+DMW DI P L+KR   +APL L+QQD DDL  WWSGFARF LT+SLVDDMVTKKAF+D+YVGFDK+TKQI ALFHKVQEKNNVY+E+AFKKMA AV++FE D SENGCAQL+K+W+MLATM+GD+F ESERL+++IDRWVRNPFEYKDLEKQA KIFT+KKRWGDDD+KRGEM+IMLCRWL  EELMREWMFRNLTKKEL+ IDKWMN Y+ GRL+IIDRLYQKKAA +     EL+AIP
Sbjct:    1 MVFRWLFSSXXXXXXXXXXP---EDPPYDEHALRPGDSTPAAVEDLSRPLQVPLSAIPPILIEEHPELKLSDYDLSRGQYARNVLALTHNAVRVEMSDMWSDIFPSLQKRCHSSAPLALSQQDLDDLHAWWSGFARFTLTSSLVDDMVTKKAFNDIYVGFDKETKQIDALFHKVQEKNNVYLELAFKKMATAVENFEKDPSENGCAQLLKAWRMLATMLGDIFAESERLIQAIDRWVRNPFEYKDLEKQATKIFTNKKRWGDDDSKRGEMIIMLCRWLNSEELMREWMFRNLTKKELRYIDKWMNDYRVGRLVIIDRLYQKKAATELGYHTELEAIP 334
The following BLAST results are available for this feature:
BLAST of Ggra11116.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3F01.310e-17974.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000110_piloncontigtig00000110_pilon:55816..56826 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra11116.t1Ggra11116.t1Gracilaria gracilis GNS1m malemRNAtig00000110_pilon 55816..56826 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra11116.t1 ID=Ggra11116.t1|Name=Ggra11116.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=337bp
MVFRWLFSSSSSSATPSAHPPPDESAVPDEHVLRPGDSTPAAMEDLSRPL
RVSLNAIAPALVEARPELKLSEYDMSRGQYAINVLALTHNAVRVEMADMW
GDIIPGLEKRSQPNAPLPLTQQDSDDLRKWWSGFARFALTASLVDDMVTK
KAFSDVYVGFDKDTKQIAALFHKVQEKNNVYMEMAFKKMAKAVDSFEHDV
SENGCAQLVKSWQMLATMIGDVFTESERLVESIDRWVRNPFEYKDLEKQA
AKIFTSKKRWGDDDAKRGEMVIMLCRWLTEEELMREWMFRNLTKKELKCI
DKWMNGYQDGRLIIIDRLYQKKAANDSSDMELDAIP*
back to top