Ggra6351.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6351.t1
Unique NameGgra6351.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length325
Homology
BLAST of Ggra6351.t1 vs. uniprot
Match: A0A2V3IQ21 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ21_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 3.520e-32
Identity = 72/135 (53.33%), Postives = 91/135 (67.41%), Query Frame = 0
Query:  189 LEFPRAKPHTEQVFIALYGTLHPAT--NAL-----AYDDTPVYRAASGLTVQLGDTVRNGGRSERAAMAEGRLVAEGFRMSHTVPGIVSMVARSGAVDSRFFF--------YLDGRYVAFGRVQSGLGALFELER 308
            ++  +A   T ++ IALYGT+ P T  N L      Y DT VYR  +GLT+QLGD +RNGG+S RAA   G L AE +R+SH+VPGI+SMV + G VDSRFF         YLDGRYVAFGRV+SG+  L+EL+R
Sbjct:   89 IDLQQANGRTGRLTIALYGTVVPDTVDNFLRLIDNGYRDTKVYRVVNGLTIQLGDVLRNGGKSGRAATETGVLEAENYRISHSVPGILSMVVKDGMVDSRFFVTTRPGDSRYLDGRYVAFGRVESGMDTLYELDR 223          
BLAST of Ggra6351.t1 vs. uniprot
Match: R7QK13 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK13_CHOCR)

HSP 1 Score: 109 bits (273), Expect = 1.810e-24
Identity = 65/130 (50.00%), Postives = 78/130 (60.00%), Query Frame = 0
Query:  199 EQVFIALYGTLHPATNA-------LAYDDTPVYRAASGLTVQLGDTVRNGGRSERAAMAEGRLVAEGFRMSHTVPGIVSMVAR-SGAVDSRFFF--------YLDGRYVAFGRVQSGLGALFELERKAER 312
            E+V I LYG + PAT A         Y  T VYR   GLTVQLGD ++NGGRS RAA A+G L  E  R+ HT+PG+VSMV    G  DSRFF         YLDGRY AFGRV   +   +++ERKA +
Sbjct:  124 ERVTIGLYGDVTPATVANFKALLQSGYVGTSVYRVVPGLTVQLGDVLKNGGRSGRAATADGSLALENVRVRHTIPGLVSMVRGVDGRGDSRFFVNTRPGDSGYLDGRYCAFGRVLENMAFWYKVERKANK 253          
BLAST of Ggra6351.t1 vs. uniprot
Match: A0A5J4Z0I4 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0I4_PORPP)

HSP 1 Score: 81.6 bits (200), Expect = 6.340e-15
Identity = 47/128 (36.72%), Postives = 66/128 (51.56%), Query Frame = 0
Query:  199 EQVFIALYGTLHPAT-----------NALAYDDTPVYRAASGLTVQLGDTVRNGGRSERAAMAEGRLVAEGFRMSHTVPGIVSMV-ARSGAVDSRFFF-------YLDGRYVAFGRVQSGLGALFELE 307
            +++ I L+G + P T               Y  +  YR  SGLTVQ GD   + G+  RA +  G  + E F + H+V G++SM  AR G  DSRF         YLDGRY+AFGRV  G+  ++ +E
Sbjct:   11 QRIVIGLFGDVAPTTVQNFVGLITDKEGAGYRGSSFYRVVSGLTVQGGDIPSSKGKQGRAILPGGSYMPENFDLRHSVAGLISMCHARDGKADSRFLIQTKADSGYLDGRYIAFGRVLEGMSVIYHME 138          
BLAST of Ggra6351.t1 vs. uniprot
Match: K0TID6 (PPIase cyclophilin-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TID6_THAOC)

HSP 1 Score: 60.1 bits (144), Expect = 1.360e-6
Identity = 39/103 (37.86%), Postives = 56/103 (54.37%), Query Frame = 0
Query:  218 YDDTPVYRAASGLTVQLGDTVRNGGRSERAAMAEGRLVA------EGFRMSHTVPGIVSMVARSGAV--DSRFFF------YLDGRYVAFGRVQSGLGALFEL 306
            Y+ T VYR    + + LGD + N G S R   + G   +      EG+ +SHT PGIV+M ++ G    DSRF         LDGR+VAFGR++ G+  + E+
Sbjct:  199 YESTSVYRIEKTVGLCLGDVINNDGTSGRCHPSVGTTTSPYTIKDEGYLVSHTGPGIVTM-SKPGVHRNDSRFLITTISAPQLDGRFVAFGRIKEGMDVINEI 300          
BLAST of Ggra6351.t1 vs. uniprot
Match: B8C671 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C671_THAPS)

HSP 1 Score: 57.8 bits (138), Expect = 2.150e-6
Identity = 38/102 (37.25%), Postives = 54/102 (52.94%), Query Frame = 0
Query:  218 YDDTPVYRAASGLTVQLGDTVRNGGRSERAAMAEGRLVA------EGFRMSHTVPGIVSMVARS-GAVDSRFFF------YLDGRYVAFGRVQSGLGALFEL 306
            YD T VY+    + + +GD + + G S R   + G          EGF +SHT PGIVSM++      DSRF         LDGR+VAFGRV+ G+  + ++
Sbjct:   60 YDSTSVYKIEKTVGLCMGDVIFDNGTSGRCHPSVGSAQTPFAFEDEGFLVSHTGPGIVSMMSPGVHRNDSRFVITTTDSPQLDGRFVAFGRVKEGMDVINDI 161          
BLAST of Ggra6351.t1 vs. uniprot
Match: C5WNZ3 (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Andropogoneae TaxID=147429 RepID=C5WNZ3_SORBI)

HSP 1 Score: 56.6 bits (135), Expect = 5.930e-6
Identity = 48/145 (33.10%), Postives = 67/145 (46.21%), Query Frame = 0
Query:  177 IAHHFCGRLWMQL---EFPRAKPHTEQVFIALYGTLHPATNALAYDDTPVYRAASGLTVQLGD-TVRNGGRSERAAMAEGRLVAEGF--RMSHTVPGIVSMV-ARSGAVDSRFFF------YLDGRYVAFGRVQSGLGALFELER 308
            I     GR+ ++L   + PR   +  Q+     G    +   L Y   P +R   G   Q GD T  NG   E A    GR  A+     + H+ PG+VSM  A      S+FF       +LDGR+VAFGRV+ G+ AL  +E+
Sbjct:   18 IGGELVGRVVIELFADKVPRTAENFRQLCTGERGLGRWSGKRLHYKGAPFHRVVPGFMCQGGDITAGNGTGGESALGDGGRYFADEALGAVRHSGPGVVSMANAGPNTNGSQFFITFADAPWLDGRHVAFGRVEQGMAALRAIEK 162          
BLAST of Ggra6351.t1 vs. uniprot
Match: A0A4S2N2E9 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ascodesmis nigricans TaxID=341454 RepID=A0A4S2N2E9_9PEZI)

HSP 1 Score: 56.2 bits (134), Expect = 6.490e-6
Identity = 41/140 (29.29%), Postives = 59/140 (42.14%), Query Frame = 0
Query:  183 GRLWMQLEFPRAKPHTEQVFIALYGTLHPATNA--LAYDDTPVYRAASGLTVQLGDTVRNGGRSERAAMAEGRLVAEGFRMSHTVPGIVSMVARSGAVDSRFFF-------YLDGRYVAFGRVQSGLGALFELERKAERL 313
            GR+ ++L FP+  P T + F       H       + Y     +R      +Q GD +   G          +   EGF + H  PGI+SM       +   FF       +LDG+YVAFGRV  G+    E+ RK E +
Sbjct:   23 GRIKLEL-FPKIVPKTAENFRQFCTGEHKGRGGKPIGYKGCKFHRVMKDFMIQGGDFLNGDGTGSTTIYGSDKFADEGFMIKHDGPGILSMANSGPNTNGCQFFITSKAAPFLDGKYVAFGRVIEGM----EVVRKVENV 157          
BLAST of Ggra6351.t1 vs. uniprot
Match: A0A3N4KV62 (Peptidyl-prolyl cis-trans isomerase n=3 Tax=Morchella TaxID=5193 RepID=A0A3N4KV62_9PEZI)

HSP 1 Score: 56.2 bits (134), Expect = 6.700e-6
Identity = 40/134 (29.85%), Postives = 61/134 (45.52%), Query Frame = 0
Query:  183 GRLWMQLEFPRAKPHTEQVF--IALYGTLHPATNALAYDDTPVYRAASGLTVQLGDTVRNGGRSERAAMAEGRLVAEGFRMSHTVPGIVSMVARSGAVDSRFFF-------YLDGRYVAFGRVQSGLGALFELE 307
            GR+ M+L F    P T + F       T       L Y  +  +R  +   +Q GD + N G    +     R   EGF++ H VPGI++M       +   FF       +LDG+YVAFG+V  G+  + ++E
Sbjct:   25 GRIKMEL-FQDIVPKTTENFRQFCTGETKGRGGRPLGYKGSKFHRVLTAHRIQGGDFLNNDGSGAASIYGSDRFPDEGFQVKHDVPGILAMANSGPNTNGCQFFITSKPAPFLDGKYVAFGKVIDGMDVVRKVE 157          
BLAST of Ggra6351.t1 vs. uniprot
Match: A0A067LPN3 (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A067LPN3_JATCU)

HSP 1 Score: 56.6 bits (135), Expect = 7.500e-6
Identity = 46/146 (31.51%), Postives = 71/146 (48.63%), Query Frame = 0
Query:  177 IAHHFCGRLWMQLEFPRAKPHTEQVFIALYGT---LHPATNALAYDDTPVYRAASGLTVQLGDTVRNGGRSERAAMAEGRLVAEGFRMSHTVPGIVSMV-ARSGAVDSRFFF------YLDGRYVAFGRVQSGLGALFELERKAER 312
            IA    GR+ M L F +A P T + F AL      +  +   L Y  +  +R      +Q GD     GR   +   E +   E F++ HT PG++SM  A      S+FF       +LDGR+V FG+V SG+ A++++E +  +
Sbjct:   46 IAGKPAGRIVMGL-FGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSVFHRIIPSFMLQGGDFTLGDGRGGESIYGE-KFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTNWLDGRHVVFGKVISGMDAVYKIEAEGRQ 189          
The following BLAST results are available for this feature:
BLAST of Ggra6351.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IQ213.520e-3253.33Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracil... [more]
R7QK131.810e-2450.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondr... [more]
A0A5J4Z0I46.340e-1536.72Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphy... [more]
K0TID61.360e-637.86PPIase cyclophilin-type domain-containing protein ... [more]
B8C6712.150e-637.25Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thalas... [more]
C5WNZ35.930e-633.10Peptidyl-prolyl cis-trans isomerase n=3 Tax=Androp... [more]
A0A4S2N2E96.490e-629.29Peptidyl-prolyl cis-trans isomerase n=1 Tax=Ascode... [more]
A0A3N4KV626.700e-629.85Peptidyl-prolyl cis-trans isomerase n=3 Tax=Morche... [more]
A0A067LPN37.500e-631.51Peptidyl-prolyl cis-trans isomerase n=2 Tax=Croton... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 175..317
e-value: 4.4E-13
score: 51.3
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 164..308
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 191..309
e-value: 6.5E-9
score: 36.2
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 183..308
score: 11.090634
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..324
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000096_piloncontigtig00000096_pilon:324720..328165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6351.t1Ggra6351.t1Gracilaria gracilis GNS1m malemRNAtig00000096_pilon 324720..328165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6351.t1 ID=Ggra6351.t1|Name=Ggra6351.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=325bp
MRRATCSTALALAVLSARRRIAPPDAASRAPQHRARRHIARAATSNPPLH
RTRRHIAPPHPPPHPHPPPPAATSTPAATSAPAATSRAPPHRAHRHIRAR
RHIRTRRHIARAATSRAPPHRARRHIARAAASRAPPHRVRRRIARAAAPA
ATSAPAATSAPAATSRAPPHRARRRRIAHHFCGRLWMQLEFPRAKPHTEQ
VFIALYGTLHPATNALAYDDTPVYRAASGLTVQLGDTVRNGGRSERAAMA
EGRLVAEGFRMSHTVPGIVSMVARSGAVDSRFFFYLDGRYVAFGRVQSGL
GALFELERKAERLSRASVWRALAE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029000Cyclophilin-like_dom_sf
IPR002130Cyclophilin-type_PPIase_dom