Ggra6347.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra6347.t1 vs. uniprot
Match: A0A2V3IKM2 (DNA topoisomerase 6 subunit B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKM2_9FLOR) HSP 1 Score: 498 bits (1282), Expect = 7.450e-168 Identity = 285/482 (59.13%), Postives = 318/482 (65.98%), Query Frame = 0
Query: 45 LKFKSPAEFFAVHHH------PGAGG------------ERARCRRGYQPVAVCVPVLQRISRSQFRSMLSMDAARTRVDHSLYEDVESVKEXXXXXXXXXXXXXXXXXXXXXXSQPSAKGSKQHRALSNDVFRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITT-AKQNCPITECVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVKELVEQVKDSTTL-------------------------------------------ICALLHEARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
LKFKSPAEFFA + + PG + A V++ + QRI +FRSML MDAA RVDHSLY+ ++ + P + +H A N VFR+TV+D GMAH DVPNMM RVLAGTK+ VRQAR FGLGSKMALIWAKMSTGLP+ +TT A + PIT CVLDIDITNN PTVI HT+S N + WRG+KVSVTI+GN +TYRSKILAYMRQ AVITPYAQFH FQS +DA D+KD EA+FSRRT HMPPPAREV +HPSSVNQLI+K+L+ VK STTL I ALLH ARFDK +GSCLSP GEYNL LGITKELKP LVATHAEPADVFEGHP IVEAGV LGGSG KPGIN+YRFA IPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV
Sbjct: 42 LKFKSPAEFFAENKNIAGFDNPGKSLYTTIRELVENALDAAESIHNLPDVSLHI---QRIPPHRFRSMLGMDAAPHRVDHSLYKRPPIPEQTTTKNSNLNNNI----------NNPDSHSRPRHTA--NHVFRVTVQDNGCGMAHDDVPNMMARVLAGTKYCVRQARGKFGLGSKMALIWAKMSTGLPLCVTTSASPSAPITHCVLDIDITNNRPTVISHTKSPNPKTWRGSKVSVTIQGNWTTYRSKILAYMRQMAVITPYAQFHLIFQSNVDAADSKDLEAIFSRRTDHMPPPAREVKHHPSSVNQLILKQLLGLVKPSTTLVHFLSTQLDSIPRSLAVRLINELGPDFTSHMTVSQLQLNHIRQIDALLHAARFDKPNGSCLSPAGEYNLRLGITKELKPTLVATHAEPADVFEGHPFIVEAGVALGGSGMKPGINVYRFANRIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 508
BLAST of Ggra6347.t1 vs. uniprot
Match: R7QF50 (Type II DNA topoisomerase VI subunit B n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF50_CHOCR) HSP 1 Score: 459 bits (1180), Expect = 8.090e-152 Identity = 272/511 (53.23%), Postives = 314/511 (61.45%), Query Frame = 0
Query: 44 KLKFKSPAEFFAVHHH------PGA------------GGERARCRRGYQPVAVCVPVLQRISRSQFRSMLSMDAARTRVDHSLYEDVESVKEXXXXXXXXXXXXXXXXXXXXXXS-----------------------------QPSAKGSKQHRALSNDVFRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITTAKQNCPITECVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVKELVEQVKDSTTL-------------------------------------------ICALLHEARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
KLKFKSPAEFFA + + PG G + A + + V RI + QFR+M+ MD R RVD SLY+DVESVKE XXXXXXXX S QPS SK+ ++ ND+F +TV D SGMAH DVPNMMGRVLAGTK+ VRQ R FGLGSKMALIW+KMSTGLPV I TAK +T C+LDIDI N+P VI+ ++ N WRG+KVSVTIEGN STYR+KIL Y+RQ AVITPYAQF F S D D+KDFE +FSRRT MP A EV +HPSSVNQL++K+L+ VK+ +L I ALLH ARF+ DG CLSP GEYNL LGITKELKP++VATHAEPADVFEGHP IVEAGV LGG+G KPG+NI+RFA IPLLFEAGNDVVT+TARD IRWN+YKISP TDRIGV
Sbjct: 51 KLKFKSPAEFFAENKNIAGFDNPGKSLYTTIRELVENGLDAAEAIGTLPDIEIFVA---RIDKQQFRTMVGMDGNRNRVDASLYKDVESVKERKAREXXXXXXXXRTKSKDGSLSASGSGQLQTDNDDANDSKELTLESTQEASQPSQTSSKKGKSGGNDIFCVTVTDNGSGMAHDDVPNMMGRVLAGTKYCVRQTRGKFGLGSKMALIWSKMSTGLPVRINTAKAGSEVTNCILDIDIARNIPNVIELSRKENPSGWRGSKVSVTIEGNWSTYRAKILLYVRQMAVITPYAQFRLTFSSGYDNADSKDFELVFSRRTDKMPRTAAEVKHHPSSVNQLLLKQLIGDVKEDMSLVRFLTTQFVAIPRSLATRLITELGKGFTQHMTVGELTLNNIRQIDALLHAARFENPDGLCLSPAGEYNLRLGITKELKPSMVATHAEPADVFEGHPFIVEAGVALGGTGMKPGLNIFRFANRIPLLFEAGNDVVTRTARDGIRWNSYKISPNTDRIGV 558
BLAST of Ggra6347.t1 vs. uniprot
Match: DNA topoisomerase 6 subunit B isoform X2 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3D32E (DNA topoisomerase 6 subunit B isoform X2 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3D32E) HSP 1 Score: 340 bits (873), Expect = 2.850e-107 Identity = 203/489 (41.51%), Postives = 267/489 (54.60%), Query Frame = 0
Query: 37 PSSARNAKLKFKSPAEFFAVHHHPGAGGERARC---------------RRGYQPVAVCVPVLQRISRSQFRSMLSMDAARTRVDHSLYEDVESVK---EXXXXXXXXXXXXXXXXXXXXXXSQPSAKGSKQHRALSNDVFRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITTAKQNCPITE-CVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVKELVEQVKDSTTL------------------------------------------ICALLHEARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
P A+++ LK KSPAEFFA + + +C + + ++ I + +F SM+ + R R+D LY+D E+ K + +PS + S + R ++ FR+T +D GM H D+PNM GRVL+GTK+ ++Q R FGLG+KMALIW+KMSTGLP+ I+++ + T C LDIDI NVP + H + NT W G ++ V IEGN STYRSKIL YMRQ AVITPYAQF FKF S DA D K+ F+RRT+ MPP E +HPS+V+ L++K L+ + L I L +A+FD G CLSP GEYNL LGI KEL P++VAT++ VFEGHP IVEAGV++GG K G+NI+RFA IPLLFE G DVVT+TA I WNNYKI+ T D+IGV
Sbjct: 21 PRKAKDSVLKQKSPAEFFAENKNIAGFDNPGKCLYTTVRELVENSLDSAESISELPIIEVTIEEIGKIKFNSMIGL-VDRERIDKELYDDFETAKAREKRLAKEARDQEVQAKSAALGKKVKEPSVQKSMKGRGETS-YFRVTCKDNGRGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRGQSYTSFCRLDIDIHRNVPHIFLHEKKENTEGWHGAEIQVVIEGNWSTYRSKILHYMRQMAVITPYAQFLFKFVS--DAAD-KNATIQFARRTNVMPPVPCETKHHPSAVDLLLIKRLIVETSKQNLLQFLQHEFVNIGKKYAERLIGEMGQDFSQKMAVKSLTSQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELHPDMVATYSGSPQVFEGHPFIVEAGVSMGGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWNNYKINQTQDKIGV 504
BLAST of Ggra6347.t1 vs. uniprot
Match: A0A1R3HPP0 (DNA topoisomerase 6 subunit B n=2 Tax=Malvaceae TaxID=3629 RepID=A0A1R3HPP0_COCAP) HSP 1 Score: 333 bits (853), Expect = 4.830e-105 Identity = 210/491 (42.77%), Postives = 267/491 (54.38%), Query Frame = 0
Query: 37 PSSARNAKLKFKSPAEFFAVHHHPGAGGERARC---------------RRGYQPVAVCVPVLQRISRSQFRSMLSMDAARTRVDHSLYEDVESVK--EXXXXXXXXXXXXXXXXXXXXXXSQPSA--KGSKQHRALSNDVFRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITTA-KQNCPITECVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVKELVEQVKDSTTLICALLHE-------------------------------------------ARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
P A+ + LK KSPAEFFA + + +C + V ++ I +S+F SM+ + R RVD LY+D E+ K E + SA KG K S FR+T +D GM H D+PNM GRVL+GTK+ ++Q R FGLG+KMALIW+KMSTGLP+ I+++ K ++ C LDIDI N+P V H + N +W G ++ V IEGN +TYRSKIL YMRQ AVITPYAQF FKF S D+ D K+ F+RRT MPP E +HPSSV+ L++K L+ + T L+ L HE A+FD G CLSP GEYNL LGI KEL P++VAT++ A VFEGHP IVEAGV+LGG K G+NI+RFA IPLLFE G DVVT+TA I WN YKI+ T D+IGV
Sbjct: 17 PKKAKESILKQKSPAEFFAENKNIAGFDNPGKCLYTTVRELVENALDSAESISELPVVEITIEEIVKSKFNSMIGL-VDRERVDAELYDDFETAKAREKRLAKEARAQELQAKNAALGKKVKESAAPKGVKGRGEAS--FFRVTCKDNGRGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKSQNYVSFCRLDIDIHRNIPHVHLHEKRDNKDRWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFKFVS--DSPD-KNVTIKFARRTDVMPPVPVETKHHPSSVDILLIKRLIAETS-KTNLMQFLQHEFVNIGKSLAERLIGEMGPDFSPKMAVKSLTDQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELHPDMVATYSGSAQVFEGHPFIVEAGVSLGGKDVKHGLNIFRFANRIPLLFEQGGDVVTRTALKRINWNTYKINQTQDKIGV 500
BLAST of Ggra6347.t1 vs. uniprot
Match: A0A0L0FYT8 (HATPase_c domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FYT8_9EUKA) HSP 1 Score: 334 bits (857), Expect = 7.500e-105 Identity = 178/363 (49.04%), Postives = 229/363 (63.09%), Query Frame = 0
Query: 145 KGSKQHRALSNDVFRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITTAK-QNCPITECVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVK------------------------------ELVEQV-KDSTTLICAL-----------LHEARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
KG+K+ D +++TV D SGM H D+PNM GRVLAGTK+ V+Q R FGLG+KMALIWAKMSTG P+ + +++ N +TEC LDIDI N P +I+H + NT WRG++++V IEG +TYR+KIL+YMRQ AVITPYA+F + + K FE ++RRT HMP PA EV +HPSSV+ +++K E++E++ +D I L H+ F DG CLSP GEYNL LGI KELKP +VAT PA +FEGHP IVEAGV+LGG + GIN+YRFA IPLLFE G DVVT+TA I W +YK++PTTD+IGV
Sbjct: 78 KGNKK-----TDYYKVTVTDNGSGMRHEDIPNMFGRVLAGTKYQVKQNRGRFGLGAKMALIWAKMSTGQPLSVRSSRGPNSKVTECTLDIDIYKNAPRIIRHVEVPNTEGWRGSEITVVIEGTWTTYRAKILSYMRQLAVITPYAEFSL---IHVSLKEDKSFEVRYARRTEHMPAPAYEVKHHPSSVDLIVLKKILGDAAHANKKLKRTLTHEFAGISSVKANEIIERMGRDKMDAIAELEEKDIKSLRGIFHDTNFPTPDGDCLSPAGEYNLRLGIMKELKPEMVATCQVPAGIFEGHPFIVEAGVSLGGKKVRQGINVYRFANRIPLLFENGADVVTRTAMTRINWKSYKMNPTTDKIGV 432
BLAST of Ggra6347.t1 vs. uniprot
Match: A0A1U7ZUU4 (DNA topoisomerase 6 subunit B n=5 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7ZUU4_NELNU) HSP 1 Score: 335 bits (859), Expect = 1.260e-104 Identity = 205/487 (42.09%), Postives = 264/487 (54.21%), Query Frame = 0
Query: 40 ARNAKLKFKSPAEFFAVHHHPGAGGERARC---------------RRGYQPVAVCVPVLQRISRSQFRSMLSMDAARTRVDHSLYEDVESVK---EXXXXXXXXXXXXXXXXXXXXXXSQPSA-KGSKQHRALSNDVFRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITTAKQNCPITE-CVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVKELVEQVKDSTTL------------------------------------------ICALLHEARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
A+ + LK KSPAEFFA + + +C + V ++ I +S+F SM+ + R RVD LY+D ES K + +P+A KG+K S FR+T +D GM H D+PNM GRVL+GTK+ ++Q R FGLG+KMALIW+KMSTGLP+ I+++ + T C LDIDI N+P + H + N KW G ++ V IEGN +TYRSKIL YMRQ AVITPYAQF FK+ S DA D K+ F+RRT MPP E +HPS+V+ L++K L+ + L I L +A+FD G CLSP GEYNL LGI KEL P +VAT++ VFEGHP IVEAGV+LGG K G+NI+RFA IPLLFE G DVVT+TA I WN+YKI+ T D+IGV
Sbjct: 24 AKESVLKQKSPAEFFAENKNIAGFDNPGKCLYTTVRELVENSLDSAESISELPVIEVTIEEIGKSRFNSMIGL-IDRERVDEELYDDYESAKAREKRLAKEARIQEMQAKNAALRKKVKEPAAPKGTKGRGEAS--FFRVTCKDNGRGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMRGQNYTSFCRLDIDIHRNIPHIHLHEKRDNKEKWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFKYVS--DAAD-KNVTIRFARRTDVMPPVPLETKHHPSAVDLLLIKRLIAETSKQNLLQFLQHEFVNIGKSYAERLIGEMGPDFSPKMAVKSLTSQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELHPEMVATYSCSPQVFEGHPFIVEAGVSLGGKDVKQGLNIFRFANRIPLLFERGADVVTRTALKRINWNSYKINQTQDKIGV 504
BLAST of Ggra6347.t1 vs. uniprot
Match: A0A2G5ECD5 (DNA topoisomerase 6 subunit B n=3 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5ECD5_AQUCA) HSP 1 Score: 335 bits (859), Expect = 1.330e-104 Identity = 207/490 (42.24%), Postives = 267/490 (54.49%), Query Frame = 0
Query: 37 PSSARNAKLKFKSPAEFFAVHHH------PGAG---------GERARCRRGYQPVAVCVPVLQRISRSQFRSMLSMDAARTRVDHSLYEDVESVK---EXXXXXXXXXXXXXXXXXXXXXXSQPSA-KGSKQHRALSNDVFRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITTAKQNCPITE-CVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVKELVEQVKDSTTL------------------------------------------ICALLHEARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
P A+ + LK KSPAEFF+ + + PG + V ++ I + +F SM+ + + RVD +LY+D ES K + +PSA KG K S FR+T +D GM H D+PNM GRVL+GTK+ ++Q R +GLG+KMALIW+KMSTGLP+ I+++ +N T C LDIDI N+P V H + N +W G ++ V IEGN +TYRSKIL YMRQ AVITPYAQF FKF S DAVD K F+RRT MPP E YHPS+V+ L++K L+ + L I L +A+FD G CLSP GEYNL LGI KEL P++VAT++ A VFEGHP IVEAGV++GG K G+NI+RFA IPLLFE G DVVT+TA I W++YKI+ T D+IGV
Sbjct: 21 PKKAKESVLKQKSPAEFFSENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEITIEEIGKVKFNSMIGL-VDQERVDQALYDDFESAKAREKRLAKEAKNQEIQAKNASLGKKTKEPSAPKGIKGRGEAS--FFRVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKYGLGAKMALIWSKMSTGLPIEISSSMKNQSYTSFCRLDIDIHRNIPHVHIHEKRDNKERWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFKFVS--DAVD-KSITIRFARRTDIMPPVPVETKYHPSAVDLLLIKRLIAETSKQNLLQFLQHEFVNLGKAHAERLIGEMGPDFSPKMAVKSLTSQQIVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGIVKELHPDMVATYSGSAQVFEGHPFIVEAGVSVGGKDVKQGLNIFRFANRIPLLFEQGADVVTRTALKRINWSSYKINQTQDKIGV 504
BLAST of Ggra6347.t1 vs. uniprot
Match: A0A199UVR2 (DNA topoisomerase 6 subunit B n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199UVR2_ANACO) HSP 1 Score: 335 bits (859), Expect = 1.360e-104 Identity = 209/507 (41.22%), Postives = 272/507 (53.65%), Query Frame = 0
Query: 20 APAKSPKRARVRKHTAEPSSARNAKLKFKSPAEFFAVHHH------PGAG---------GERARCRRGYQPVAVCVPVLQRISRSQFRSMLSMDAARTRVDHSLYEDVESVK---EXXXXXXXXXXXXXXXXXXXXXXSQPS-AKGSKQHRALSNDVFRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITTA-KQNCPITECVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVKELVEQVKDSTTL------------------------------------------ICALLHEARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
AP + PK++ K P A+ + LK KSPAEFFA + + PG + V ++ I++S+F +M+ + R RVD LY+D ES K + +PS AKG+K + FR+T +D GM H D+PNM GRVL+GTK+ ++Q R FGLG+KMALIW+KMSTGLP+ IT++ K ++ C LDIDI N+P V H + N +W G ++ V IEGN +T+RSKIL YMRQ AVITPYAQF FKF I K F+RRT MPP E +HPS+V+ L++K LV + L I L +A+FD G CLSP GEYNL LGI KEL+P+LVAT+A VFEGHP IVEAG++LGG K G+NI+RFA IPLLFE G DV+T+TA I WN+YKI+ D+IGV
Sbjct: 9 APEEEPKKSNRGKAKQNPKKAKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENSLDSAESISELPVIEIAIEEINKSKFNTMIGL-VDRERVDEELYDDFESAKAREKRLAKEARVQEIQAKNIALGKKFKEPSTAKGAKSRGEAA--FFRVTCKDNGRGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEITSSMKGQNYVSYCRLDIDIHKNIPHVHAHEKRENKDRWHGAEIQVIIEGNWTTHRSKILHYMRQMAVITPYAQFLFKF---ISDTAEKTVTVRFARRTDVMPPVPLETKHHPSAVDLLLIKRLVAETSKQNLLQFLQHEFVNIRKSYAERLIGEMGPDFSSKMPVKSLTSQQIVRIQQLFRQAKFDDPSGDCLSPAGEYNLRLGIIKELQPDLVATYAGSPQVFEGHPFIVEAGISLGGKDVKQGLNIFRFANRIPLLFEQGADVITRTALKRINWNSYKINQMQDKIGV 509
BLAST of Ggra6347.t1 vs. uniprot
Match: A0A0K9P2W3 (DNA topoisomerase 6 subunit B n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P2W3_ZOSMR) HSP 1 Score: 335 bits (859), Expect = 1.360e-104 Identity = 204/493 (41.38%), Postives = 269/493 (54.56%), Query Frame = 0
Query: 38 SSARNAKLKFKSPAEFFAVHHH------PGAG---------GERARCRRGYQPVAVCVPVLQRISRSQFRSMLSMDAARTRVDHSLYEDVESVKEXXXXXXXXXXXXXXXXXXXXXXSQPSAKGSKQHRALSN-------DVFRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITTAK--QNCPITECVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVKELVEQVKDSTTL------------------------------------------ICALLHEARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
S + + LK KSPAEFFA + + PG + V ++ I++S+F +M+ + R RVD LY+D ESVK + S K +K+ + L FR+T +D GM H+D+PNM+GRVL+GTK+ ++Q R FGLG+KMALIW+KMSTGLP+ I+++ QN ++ C LDIDI N+P + H + NT W G ++ V IEGN +TYRSKIL YMRQ AVITPYAQF F F I + K+ FSRRT MPP E YHPS+V+ L++K L+ + L I L +A+FD +G CLSP GEYNL LGITKEL P++VAT++ VFEGHP IVEAG++LGG K G+NI+RFA IPLLFE G DVVT+TA+ I WN+YKI+ T D+IGV
Sbjct: 28 SKVKESVLKQKSPAEFFAENKNIAGFDNPGKSLYTTVRELVENALDSAESISELPVIEVTIEEITKSKFNTMIGL-VDRERVDEELYDDFESVK-----VREKRLLKEARVQEMNTKNAASGKKTKEPQQLKTIKGRGDTSFFRVTCKDNGRGMPHNDIPNMLGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMIDQNY-VSFCKLDIDIHRNIPHIHLHEKRDNTEDWHGAEIQVIIEGNWTTYRSKILHYMRQMAVITPYAQFVFSF---ISDMQDKNVTVQFSRRTDVMPPIPPETKYHPSAVDLLLIKRLIAETTKQNLLQFLQHEFVNIGKSYAQRLIEEMGADFSSKMTVKSLSSQQLVRIHQLFRQAKFDDPNGVCLSPAGEYNLRLGITKELHPDMVATYSGSPQVFEGHPFIVEAGISLGGKDVKQGLNIFRFANRIPLLFERGADVVTRTAQKRINWNSYKINQTQDKIGV 510
BLAST of Ggra6347.t1 vs. uniprot
Match: DNA topoisomerase 6 subunit B isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3E1E (DNA topoisomerase 6 subunit B isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3E1E) HSP 1 Score: 335 bits (858), Expect = 1.560e-104 Identity = 204/497 (41.05%), Postives = 266/497 (53.52%), Query Frame = 0
Query: 37 PSSARNAKLKFKSPAEFFAVHHHPGAGGERARCRRGYQPVAVCVP-----------------VLQRISRSQFRSMLSMDAARTRVDHSLYEDVESVKEXXXXXXXXXXXXXXXXXXXXXXSQPSAKGSKQHRALSNDV---------FRLTVEDKCSGMAHHDVPNMMGRVLAGTKFSVRQARSNFGLGSKMALIWAKMSTGLPVHITTA-KQNCPITECVLDIDITNNVPTVIKHTQSANTRKWRGTKVSVTIEGNLSTYRSKILAYMRQTAVITPYAQFHFKFQSAIDAVDAKDFEALFSRRTHHMPPPAREVNYHPSSVNQLIVKELVEQVKDSTTL------------------------------------------ICALLHEARFDKADGSCLSPTGEYNLPLGITKELKPNLVATHAEPADVFEGHPLIVEAGVTLGGSGTKPGINIYRFATGIPLLFEAGNDVVTKTARDSIRWNNYKISPTTDRIGV 464
P S++++ LK KSPAEFFA + + + Y V V ++ I +S+F SM+ + R RVD LY+D E+VK ++ +A G K + V +++T +D GM H D+PNM GRVL+GTK+ ++Q R FGLG+KMALIW+KMSTGLP+ I+++ K +T C LDIDI N+P V H + NT +W G ++ V IEGN +TYRSKIL YMRQ AVITPYAQF F+F I K+ F+RRT MPP E +HPSSV+ L++K L+ T L I L +A+FD G CLSP GEYNL LG+ KEL P++VAT++ A VFEGHP IVEAGV+LGG K GINI+RFA IPLLFE G DVVT+TA I W+ YKI+ T D+IGV
Sbjct: 18 PKSSKDSNLKQKSPAEFFAENKNIAGFDNPGKSL--YTTVRELVENALDSAESISQLPEVEITIEEIGKSKFNSMIGL-VDRERVDEKLYDDYETVKAREKRLAKEARAQEIQ-------AKNAASGKKVKEPAVSKVLKGRGEASYYKVTCKDNGKGMPHDDIPNMFGRVLSGTKYGLKQTRGKFGLGAKMALIWSKMSTGLPIEISSSMKGQSYVTFCRLDIDIHRNIPHVHLHEKKGNTERWHGAEIQVVIEGNWTTYRSKILHYMRQMAVITPYAQFLFRF---ISDTPEKNITIKFARRTDVMPPVPVETKHHPSSVDLLLIKRLIADTSKKTLLQFLQNEFVNINKSLAARLIGEMGPDFSPNMAVKSLTSQQMVRIHQLFRQAKFDDPSGDCLSPAGEYNLRLGVIKELHPDMVATYSGSAQVFEGHPFIVEAGVSLGGKDVKQGINIFRFANRIPLLFEQGGDVVTRTALKRINWSTYKINQTQDKIGV 501 The following BLAST results are available for this feature:
BLAST of Ggra6347.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6347.t1 ID=Ggra6347.t1|Name=Ggra6347.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=475bpback to top |