Ggra7749.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7749.t1
Unique NameGgra7749.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length306
Homology
BLAST of Ggra7749.t1 vs. uniprot
Match: A0A2V3IWL2 (Armadillo repeat-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWL2_9FLOR)

HSP 1 Score: 402 bits (1034), Expect = 1.040e-138
Identity = 229/305 (75.08%), Postives = 250/305 (81.97%), Query Frame = 0
Query:    1 MSVADAASVRTVAVQLRALSADPDNQPIIAREEGCLRALISFVEAQDIAVATIAVAALKNLASHPDNFQLLRSEHDLLDALKTLLLADHADRQLRQTVFDVLEELVXXXXXXXXXXXXXXEHNAGLRQKPAPEPGLLEHPCTVRLHVPGISDDVFCVRVEQLVIRKRGVISIAFELGAEVAVIYTKTPADELMSYVSTMTGVSVQQLPDPPEHDEDDCDDEHGTNDTASERDHDAAQPAYLDQSGQRLRDVAKKNAKKKNNIAQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGWGLW 305
            M+VADAASVRTVAVQLRALSADPDNQPIIARE+GCLRALISFV AQ I VATIAVAA++NL          RSEHDLLDALK LLLA+ ADR LRQTVFDVLE+LV        XXXXX E  AGLR+K   EPGL++HP TVRLH+ GISD++ CVRVEQLVIR RGVIS+AFELGAEVAVIYT+T A+ L+SY+STMTGV VQQL DPPE        E    DT SE+++D  QPAYLDQSGQRLRDVAKKNAKKK+ I QGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGWGLW
Sbjct:    1 MAVADAASVRTVAVQLRALSADPDNQPIIAREDGCLRALISFVHAQHIPVATIAVAAIRNLXXXXXXXXXXRSEHDLLDALKNLLLANDADRDLRQTVFDVLEQLVDESDDDEMXXXXXLEQQAGLREKTTSEPGLMDHPSTVRLHIHGISDELLCVRVEQLVIRTRGVISVAFELGAEVAVIYTRTTAEHLISYLSTMTGVKVQQLEDPPE--------EEHEEDTESEKENDTTQPAYLDQSGQRLRDVAKKNAKKKHTITQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGWGLW 297          
BLAST of Ggra7749.t1 vs. uniprot
Match: R7QE51 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE51_CHOCR)

HSP 1 Score: 165 bits (417), Expect = 2.410e-47
Identity = 92/151 (60.93%), Postives = 112/151 (74.17%), Query Frame = 0
Query:  158 RVEQLVIRKRGVISIAFELGAEVAVIYTKTPADELMSYVSTMTGVSVQQLPDPPEHDEDDCDDEHGTNDTA---SERDHDAAQPAYLDQSGQRLRDVAKKNAKKKNNIAQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGWGLW 305
            RVEQL+IRKRGVIS+AFE+GAEVAV+YT+ P ++L S++ TMTG +V  LP+    DE+               +E+++   QP YLD+SGQ  R VAKKNAKKKN I+QGASSL ERLRAQREEESRKKAR NRL+ SIGRG+ SGWG W
Sbjct:    2 RVEQLIIRKRGVISVAFEIGAEVAVVYTRNPPEDLASFIGTMTGTTVDLLPELQSDDEEXXXXXXXXXXXXIDNAEKENGGGQPEYLDKSGQTFRAVAKKNAKKKNTISQGASSLTERLRAQREEESRKKARGNRLMGSIGRGINSGWGFW 152          
BLAST of Ggra7749.t1 vs. uniprot
Match: M2XW49 (Armadillo repeat-containing protein 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XW49_GALSU)

HSP 1 Score: 142 bits (358), Expect = 1.910e-36
Identity = 110/330 (33.33%), Postives = 169/330 (51.21%), Query Frame = 0
Query:    8 SVRTVAVQLRALSADPDNQPIIAREEGCLRALISFVEAQDIAVATIAVAALKNLASHPDNFQLLRSEHDLLDALKTLLLA-DHADRQLRQTVFDVL----------------EELVXXXXXXXXXXXXXXEHNAGLRQKPAPEPGLLEH-------------PCTVRLHVPGISDDVFCVRVEQLVIRKRGVISIAFELGAEVAVIYTKTPADELMSYVSTMTGVSVQQLPDPPEHDEDDCDDEHGTNDTASERDHDAAQ-PAYLDQSGQRLR-DVAKKNAKKKNNIAQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTSGWGLW 305
            S+R VAVQLR+LSAD +NQPIIAREEGC+ AL+ F+E  D  +  IAV A+ +L SHPDN ++++SE  L+ ALK L+   D AD   RQ+    L                EEL               + +     KP  +  L E                T+RL+V  +SD+    RVE+L++  RGV+S++FE+G E  ++ ++  A+ +   +    G   + +      DE+   ++      ++E  + ++  P YLD+   R R   + +   K      G  +L ERL AQR+EE++K+ARA RL++ IG+   SG+G W
Sbjct:    7 SIRNVAVQLRSLSADTENQPIIAREEGCMAALVGFIEGNDSEIVRIAVEAILDLTSHPDNAEVMKSERGLVSALKALVTDFDRADIGTRQSAHACLVNLLVRNSKESQAFIAEELASLANKGGLGGKEAFDSSLSTVLKPKAQNCLSEQNHADLVDVPFLPQTLTIRLYVRNVSDEDVQYRVERLLVMTRGVVSVSFEIGTETVIVRSRIAAEYVRKAIELRGGFPAEII------DEEVYIEKENNQLRSNEALYISSDGPKYLDEMPSRSRLSWSWQRGDKIIVPGNGGVTLAERLEAQRKEEAKKRARATRLVNRIGKSFVSGFGFW 330          
BLAST of Ggra7749.t1 vs. uniprot
Match: A0A1X6P5N0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P5N0_PORUM)

HSP 1 Score: 139 bits (350), Expect = 2.220e-33
Identity = 112/309 (36.25%), Postives = 153/309 (49.51%), Query Frame = 0
Query:    9 VRTVAVQLRALSADPDNQPIIAREEGCLRALISFVEAQDIAVATIAVAALKNLASHPDNFQLLRSEHDLLDALKTLLLADHADRQLRQTVFDVLEELVXXXXXXXXXXXXXXEHNAGLRQKPAPEPGLLEHPCTVRLHVPGISDDVFCVRVEQLVIRKRGVISIAFELGAEVAVIYTKTPADELMSYVSTMTGVSVQQLPDPPEHDEDDCD-------------------DEHGTNDTASERDHDAAQPAYLDQSGQRLRDVAKKNAKKKNNIAQGASSLHERLRAQREEESRKKARANRLLDSIGRGM 298
            V  VA Q++AL+A  +NQPI+ARE+GCL ALISF+     ++AT+AVAAL +L++HP N  LLR E DL  AL  L++ D     LR++   +LEELV                 AGL                    V G        RVE L++R  GV S+ FELGAE AV++ ++ AD    ++  M G  V  LP P E  E +                                     A   YLD++GQRL+D  ++  KKK  +  GASSL  RL  QR+ E+RK+A+  RLL+ +GRG+
Sbjct:  252 VMAVAEQIQALAAVRENQPIVAREDGCLPALISFLVPSTPSLATVAVAALVSLSAHPSNRSLLRDEGDLFAALHALIVDDATPVPLRRSTLTILEELVDDEDGEEVTELHALSVAAGL--------------------VAGAVRA----RVEGLLLRLPGVFSVGFELGAETAVVFGRSGADATAGWLRKMAGGGVTLLP-PEEXXEVEAGRAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTGYLDETGQRLKDAERRARKKKKAVNAGASSLAARLDEQRKAEARKRAKQERLLERVGRGV 535          
BLAST of Ggra7749.t1 vs. uniprot
Match: A0A5J4YQP9 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQP9_PORPP)

HSP 1 Score: 115 bits (289), Expect = 5.570e-26
Identity = 100/308 (32.47%), Postives = 145/308 (47.08%), Query Frame = 0
Query:   12 VAVQLRALSADPDNQPIIAREEGCLRALISFVE-AQDIAVATIAVAALKNLASHPDNFQLLRSEHDLLDALKTLLLA-DHADRQLRQTVFDVLEELVXXXXXXXXXXXXXXEHNAGLRQK---------------PAPEP-GLLEHPCTVRLHVPGISDDVFCVRVEQLVIRKRGVISIAFELGAEVAVIYTKTPADELMSYVSTMTGVS----VQQLPDPPEHDEDDCDDEHGTNDTASERDHDAA----QPAYLDQSGQRLRDVAKKNAKKKNNIAQGASSLHERLRAQREEESRKKARANRLLDS 293
            +A QL  LS+D D QP++ARE+GC+ AL+ F   A D      A+ AL NLASHPDNF LLR E  L  ALK ++L  + ADR +R   F ++E L               +     RQ+               PAPE       P T+R+H  G+S++    R E  + +  GV S+  E+G EV  + +   A  L++++  + G      +Q   D  E ++++ + E G  D   +  H  A    +PAYLD       D+       K+    G +SL  RL  Q+  E RKK RANR   +
Sbjct:   93 IASQLLELSSDFDMQPVVAREDGCVSALVKFAGGATDAETCRTALRALDNLASHPDNFALLRGEQGLWSALKVVMLTREDADRAMRTAAFGIMETLTDEINYDEVQELRRIQKRLAQRQQEENDTEDGALANLVYPAPESVPQAAVPGTLRVHCVGLSEEATRRRAEVALTKFPGVHSVTIEVGPEVLEVQSTCEASALLAFLPQVNGQRLVELIQSQADSEETNKENANGESGGADMQGKSAHGEANTGGKPAYLD-------DLNSAQIPHKSVTHAGGNSLAARLEEQKRAEMRKKNRANRFFSN 393          
BLAST of Ggra7749.t1 vs. uniprot
Match: A0A7S0ZAL9 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAL9_9RHOD)

HSP 1 Score: 82.0 bits (201), Expect = 8.190e-16
Identity = 48/96 (50.00%), Postives = 60/96 (62.50%), Query Frame = 0
Query:    5 DAASVRTVAVQLRALSADPDNQPIIAREEGCLRALISFVE-AQDIAVATIAVAALKNLASHPDNFQLLRSEHDLLDALKTLLLADHADRQLRQTVF 99
            D   VR +A QLR LS D + QP++AREEGC+RAL+  V  A DI    IA+ AL  LASHPDN   LR E  L DAL+ +++   AD+ LR   F
Sbjct:   25 DEDQVRGLAEQLRELSRDVEMQPVVAREEGCMRALVRLVGGASDIKSCAIALEALSMLASHPDNKYTLRMEPQLFDALRKVMVRSDADKSLRNEAF 120          
BLAST of Ggra7749.t1 vs. uniprot
Match: A0A7S0ZAL4 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZAL4_9RHOD)

HSP 1 Score: 82.4 bits (202), Expect = 6.860e-15
Identity = 63/170 (37.06%), Postives = 96/170 (56.47%), Query Frame = 0
Query:  133 EPG-----LLEHPCTVRLHVPGIS--DDVFCVRVEQLVIRKRGVISIAFELGAEVAVIYTKTPADELMSYVSTMTGVSVQQLPDPPEHDEDDCDDEHGTNDTASERDHDAAQPAYLDQSGQRLRDVAKKNAKKKNNIAQGA-SSLHERLRAQREEESRKKARANRLLDSI 294
            EPG     LL   CT+RLH  G+S  +D+  + VE  ++R  GV+S+ FELGAE+  + ++ P+++++  V  +T  SV  L    E+  DD D+EH      +E D D   P Y+D+  +R R   +K+ K K  + QG  +SL  RL  Q+  E+RK+ RANR L  +
Sbjct:   64 EPGADEIKLLPEACTIRLHCVGLSRTEDIRML-VEHRLLRSVGVLSVTFELGAEIVELQSRRPSEDVVKIVQKITKQSVVVL----ENSIDDGDEEHELVKDENEVDEDG--PQYIDKQRERERRREEKSGKPKRTVTQGGGNSLAARLEEQKRAEARKQQRANRFLGGV 226          
BLAST of Ggra7749.t1 vs. uniprot
Match: A0A2R5GV71 (Armadillo repeat-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GV71_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 8.850e-9
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query:    5 DAASVRTVAVQLRALSADPDNQPIIAREEGCLRALISFVEAQDIAVATIAVAALKNLASHPDNFQLLRSEHDLLDALKTLLLADHADRQLRQTVFDVLEEL 105
            D  + R +A QL  L+ DPDNQP I +E+GCL  L+ +V+ +DI V  IA  AL+ L+SHP N   +R    L++ +K      H + +L +     L  L
Sbjct:    7 DVPNSRAIAKQLLTLAQDPDNQPFIVQEQGCLAGLVQYVQHEDIDVVLIATRALQFLSSHPKNKTAMREFPALVENVKLAKTRSHENPRLDEFARGTLANL 107          
The following BLAST results are available for this feature:
BLAST of Ggra7749.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IWL21.040e-13875.08Armadillo repeat-containing protein 1 n=1 Tax=Grac... [more]
R7QE512.410e-4760.93Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2XW491.910e-3633.33Armadillo repeat-containing protein 1 n=1 Tax=Gald... [more]
A0A1X6P5N02.220e-3336.25Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YQP95.570e-2632.47Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S0ZAL98.190e-1650.00Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S0ZAL46.860e-1537.06Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2R5GV718.850e-937.62Armadillo repeat-containing protein 1 n=1 Tax=Hond... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 270..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..284
NoneNo IPR availablePANTHERPTHR46840ARMADILLO REPEAT-CONTAINING PROTEIN 1coord: 8..263
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..118
e-value: 1.6E-10
score: 42.7
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 34..67
score: 8.6974
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 15..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:327458..328375 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7749.t1Ggra7749.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 327458..328375 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7749.t1 ID=Ggra7749.t1|Name=Ggra7749.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=306bp
MSVADAASVRTVAVQLRALSADPDNQPIIAREEGCLRALISFVEAQDIAV
ATIAVAALKNLASHPDNFQLLRSEHDLLDALKTLLLADHADRQLRQTVFD
VLEELVDDNDDDEMDELDDLEHNAGLRQKPAPEPGLLEHPCTVRLHVPGI
SDDVFCVRVEQLVIRKRGVISIAFELGAEVAVIYTKTPADELMSYVSTMT
GVSVQQLPDPPEHDEDDCDDEHGTNDTASERDHDAAQPAYLDQSGQRLRD
VAKKNAKKKNNIAQGASSLHERLRAQREEESRKKARANRLLDSIGRGMTS
GWGLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR000225Armadillo
IPR016024ARM-type_fold