Ggra6538.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6538.t1
Unique NameGgra6538.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length368
Homology
BLAST of Ggra6538.t1 vs. uniprot
Match: A0A1V4WHP4 (Magnesium transport protein CorA n=3 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A1V4WHP4_9DELT)

HSP 1 Score: 101 bits (251), Expect = 1.610e-20
Identity = 56/145 (38.62%), Postives = 89/145 (61.38%), Query Frame = 0
Query:  225 LMVTQPQAVAHSVWKIRRTGAALRRAHHGVRALIEATERRSHTSPARVY--SAQSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGWI 367
            L+  +   +  SVW +R   +AL    H    +++   R S T    +Y  + Q  E + + R+   SLL++ L+  +NRM E M+ L V+ T+F+P+TFLAG+ GMNF+Y PEL+ RW+Y +FW+ VI++ VL + +FRRK W+
Sbjct:  202 LLRMETTTILRSVWPLREVVSALT---HDEFPMVK---RDSVTYFRDIYDHTVQIIETMETNRDIISSLLDIYLSSTSNRMNEIMKVLTVIATIFMPMTFLAGVYGMNFKYFPELEWRWAYISFWIAVIIIAVLMIFYFRRKKWL 340          
BLAST of Ggra6538.t1 vs. uniprot
Match: A0A3N5I8R9 (Magnesium transport protein CorA n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A3N5I8R9_9BACT)

HSP 1 Score: 100 bits (250), Expect = 1.820e-20
Identity = 66/188 (35.11%), Postives = 105/188 (55.85%), Query Frame = 0
Query:  187 VHAVADALPAVVEAACQRLVRAARRNLDQLDALEASAALMVT--------QPQAVAHSVWKIRRTGAALRRAHHGVRALIEATERRSHTSPARVYSAQSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGW 366
            + AV DA   V+++  +R+      +  + DAL A+A+               AV  +VW +R     L+R      ALI   E R        ++ Q+ E++ ++RE A S++EV+L+VQN R+ E M+ L V+ T+F+PLTF+A I GMNF++MPELD RW Y     ++++     +A+FRR+GW
Sbjct:  149 IDAVVDAYFPVIDSLAERM------HTIEEDALTAAASQSTLLRLIRLRHDLMAVRRAVWPLREEVLLLQREES---ALIM-PETRVFLRDVYDHAVQALEIVETLRETAVSVMEVVLSVQNQRLGEVMKVLTVIATIFIPLTFIASIYGMNFKHMPELDARWGYPGILGVMLLTAGGMIAYFRRRGW 326          
BLAST of Ggra6538.t1 vs. uniprot
Match: magnesium/cobalt transporter CorA n=1 Tax=Marinomonas sp. JHZ-47 TaxID=2529379 RepID=UPI001F0A25F0 (magnesium/cobalt transporter CorA n=1 Tax=Marinomonas sp. JHZ-47 TaxID=2529379 RepID=UPI001F0A25F0)

HSP 1 Score: 101 bits (252), Expect = 2.030e-20
Identity = 56/162 (34.57%), Postives = 93/162 (57.41%), Query Frame = 0
Query:  217 DALEASAALMVTQP-QAVAHSVWKIRRTGAALRRAHHGVRALIEATERRS------HTSP----ARVYSAQSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGWI 367
            D LE     ++ +P Q   H +  ++R  + +RR    +R +++   R        +T P       ++ Q  E++ S RE    L ++ ++  +NRM E M+ L ++++VF+PLTF++GI GMNF+YMPELD RW+Y   W++ IVL    L FF+R+GW+
Sbjct:  218 DILEDLELTVLEKPTQTALHRIHAVKRELSLIRRIVWPIREVVDQLYREEENRMGENTKPYLRDVYEHTIQIVEIIESYREMVSGLTDLYMSAVSNRMNEIMKVLTIMSSVFIPLTFISGIYGMNFKYMPELDQRWAYPVIWVVFIVLTASMLFFFKRRGWL 379          
BLAST of Ggra6538.t1 vs. uniprot
Match: A0A0K1PI00 (Magnesium transport protein CorA n=2 Tax=Vulgatibacter incomptus TaxID=1391653 RepID=A0A0K1PI00_9DELT)

HSP 1 Score: 101 bits (251), Expect = 3.610e-20
Identity = 59/162 (36.42%), Postives = 95/162 (58.64%), Query Frame = 0
Query:  217 DALEASAALMVTQPQ-AVAHSVWKIRRTGAALRRAHHGVRALI---EATERRSHTSPARVY-------SAQSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGWI 367
            D LE     ++ +P  A++  +  +RR    LRR    +R +I   ++++  + +S  R Y       S Q  +++ + R+ A  ++E+ L+  + RM E M+ L ++ T+F+P+TFLAG+ GMNF+ MPEL+  W Y  FW+I IV VV  + FFRRKGWI
Sbjct:  240 DLLETLEDRIIEEPTTALSGELHSVRRKLLELRRMIWPIRLMIHDLQSSDSPNLSSTVRTYLRDVHEHSVQLIDVIETYRDMASGMIELYLSAVSYRMNEVMKVLTIIATIFIPITFLAGVFGMNFKVMPELNWEWGYALFWLICIVTVVGLIRFFRRKGWI 401          
BLAST of Ggra6538.t1 vs. uniprot
Match: A0A1W1XKR6 (Magnesium transport protein CorA n=1 Tax=Desulfacinum hydrothermale DSM 13146 TaxID=1121390 RepID=A0A1W1XKR6_9DELT)

HSP 1 Score: 100 bits (249), Expect = 3.660e-20
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 0
Query:  276 QSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGWI 367
            Q  + L + RE   +LL+V L+  +NRM E M+ L ++ T+F+P+TF+AG+ GMNF+YMPEL   W+Y A W+I+IV+ VL L FFR+K WI
Sbjct:  263 QVLDTLENQREMGTALLDVYLSSMSNRMNEVMKVLTIIATIFIPITFIAGVYGMNFQYMPELKWPWAYPAVWLIMIVVAVLMLLFFRKKRWI 354          
BLAST of Ggra6538.t1 vs. uniprot
Match: S7TQ00 (Magnesium transport protein CorA n=1 Tax=Desulfococcus multivorans DSM 2059 TaxID=1121405 RepID=S7TQ00_DESML)

HSP 1 Score: 100 bits (249), Expect = 3.800e-20
Identity = 44/91 (48.35%), Postives = 64/91 (70.33%), Query Frame = 0
Query:  276 QSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGW 366
            Q  + + + RE A SLLE+     +NRM E M+ L +++T+F+PL+FLAG+ GMNF+YMPEL+ RWSYG FW +++V     + +FRRK W
Sbjct:  266 QITDTIETFRETATSLLELYHTSVSNRMNEVMKVLTIISTIFIPLSFLAGVYGMNFKYMPELEFRWSYGIFWFVILVAAGAMILYFRRKKW 356          
BLAST of Ggra6538.t1 vs. uniprot
Match: A0A068MY60 (Magnesium transport protein CorA n=7 Tax=Synechocystis TaxID=1142 RepID=A0A068MY60_SYNY4)

HSP 1 Score: 100 bits (250), Expect = 3.970e-20
Identity = 60/166 (36.14%), Postives = 93/166 (56.02%), Query Frame = 0
Query:  214 DQLDALEASAALMVTQPQA-VAHSVWKIRRTGAALRRA----HHGVRALIEATERRSHTSPARVYSA-------QSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGWI 367
            D  + +EA    ++  P + +   ++ IRR   ALRR      H +  L+  T     T+  R+Y         Q  +++ + RE A SL+EV +   +N+M E M+ L V++T+F+PLTF+AG+ GMNF+ MPEL+  W Y   WMI+I++    L FF RKGW+
Sbjct:  213 DYEERIEALEDTIIRNPNSSLMEEIYHIRRELLALRRLIWPLRHVMNVLLRDTTNSIVTADVRIYFRDCYDHIIQVLDIIEAYRELASSLMEVYMTAMSNKMNEVMKFLTVISTIFIPLTFIAGVYGMNFKEMPELESPWGYYITWMIMILIAGGSLYFFWRKGWL 378          
BLAST of Ggra6538.t1 vs. uniprot
Match: A0A7S0BIE8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BIE8_9RHOD)

HSP 1 Score: 98.2 bits (243), Expect = 4.010e-20
Identity = 43/91 (47.25%), Postives = 66/91 (72.53%), Query Frame = 0
Query:  276 QSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGW 366
            Q  ++L + R+ + SLL++ L+  NN+MQE M+TL +++T+F+PLTF+ G+ GMNF YMPEL   +SY  FW+ VI +++ QL +F R GW
Sbjct:  154 QVVDILETYRDVSMSLLDLYLSATNNKMQEVMKTLTIISTIFIPLTFITGVYGMNFEYMPELSWPFSYLIFWIFVIAIIMSQLYYFHRLGW 244          
BLAST of Ggra6538.t1 vs. uniprot
Match: A0A7C2NFI4 (Magnesium transport protein CorA n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C2NFI4_9DELT)

HSP 1 Score: 100 bits (250), Expect = 4.920e-20
Identity = 66/172 (38.37%), Postives = 97/172 (56.40%), Query Frame = 0
Query:  205 LVRAARRNLDQLDALEASAALMVTQPQAVAHSVWKIRRT-GAALRRAHHGVRALIEATERRSHTSPA-RVY-------SAQSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGWI 367
            ++ A    L+ L+  EA+    V+      H+V ++  T G  LR+    V AL+     R   +PA RVY       + Q +++L + RE A SL+EV L+  +NRM E M+ L V+ T+F+PLTF+ G+ GMNF +MPEL  RW+Y A W  +I L      +FRR+GWI
Sbjct:  229 VLEAIGEELEDLE--EATVQRPVSATLERIHAVRRVILTLGRTLRQQRDAVNALVRGESPR--IAPAVRVYFRDAYDHAVQISDVLETYREIAVSLMEVYLSSVSNRMNEVMKVLTVIATIFIPLTFIVGVYGMNFEHMPELRWRWAYAALWACMIALAAGMWTYFRRRGWI 396          
BLAST of Ggra6538.t1 vs. uniprot
Match: A0A2M7T5S3 (Magnesium transport protein CorA n=1 Tax=Candidatus Aquicultor secundus TaxID=1973895 RepID=A0A2M7T5S3_9ACTN)

HSP 1 Score: 99.8 bits (247), Expect = 7.050e-20
Identity = 52/132 (39.39%), Postives = 80/132 (60.61%), Query Frame = 0
Query:  236 SVWKIRRTGAALRRAHHGVRALIEATERRSHTSPARVYSAQSAELLSSVREGAHSLLEVLLAVQNNRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIVIVLVVLQLAFFRRKGWI 367
            SVW +R   AAL R   G   LI+ T    +      ++ Q  + + + R+    +L++ L+  +NRM E M+ L ++ T+F+PLTF+ G+ GMNF+YMPEL  RW Y   W I+IV+V+  LA+FRR+ W+
Sbjct:  229 SVWPLREVIAALER---GESPLIKRTTM-VYIRDVYDHTIQVIDTIETFRDMLSGMLDIYLSSISNRMNEIMKVLTIIATIFIPLTFIVGVYGMNFQYMPELGSRWGYPTVWAIMIVIVLFMLAYFRRRKWL 356          
The following BLAST results are available for this feature:
BLAST of Ggra6538.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V4WHP41.610e-2038.62Magnesium transport protein CorA n=3 Tax=Deltaprot... [more]
A0A3N5I8R91.820e-2035.11Magnesium transport protein CorA n=1 Tax=Candidatu... [more]
magnesium/cobalt transporter CorA n=1 Tax=Marinomonas sp. JHZ-47 TaxID=2529379 RepID=UPI001F0A25F02.030e-2034.57magnesium/cobalt transporter CorA n=1 Tax=Marinomo... [more]
A0A0K1PI003.610e-2036.42Magnesium transport protein CorA n=2 Tax=Vulgatiba... [more]
A0A1W1XKR63.660e-2050.00Magnesium transport protein CorA n=1 Tax=Desulfaci... [more]
S7TQ003.800e-2048.35Magnesium transport protein CorA n=1 Tax=Desulfoco... [more]
A0A068MY603.970e-2036.14Magnesium transport protein CorA n=7 Tax=Synechocy... [more]
A0A7S0BIE84.010e-2047.25Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7C2NFI44.920e-2038.37Magnesium transport protein CorA n=1 Tax=Deltaprot... [more]
A0A2M7T5S37.050e-2039.39Magnesium transport protein CorA n=1 Tax=Candidatu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.340Magnesium transport protein CorA, transmembrane regioncoord: 290..367
e-value: 4.5E-23
score: 82.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availablePANTHERPTHR46494CORA FAMILY METAL ION TRANSPORTER (EUROFUNG)coord: 279..367
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 362..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 309..329
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 341..361
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 330..340
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..308
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 42..239
NoneNo IPR availableTMHMMTMhelixcoord: 310..329
NoneNo IPR availableTMHMMTMhelixcoord: 344..361
IPR002523Mg2+ transporter protein, CorA-like/Zinc transport protein ZntBPFAMPF01544CorAcoord: 182..363
e-value: 4.4E-25
score: 88.6
IPR045863CorA, transmembrane regionSUPERFAMILY144083Magnesium transport protein CorA, transmembrane regioncoord: 302..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:211057..212160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6538.t1Ggra6538.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 211057..212160 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6538.t1 ID=Ggra6538.t1|Name=Ggra6538.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=368bp
MDSTAATPLLLHSRSHSPRLSSSLAASSHCSSPSSSHRSSPPPPPPPPPP
PPAAAASPPGCRAAAASPPECRAAVAYHTAFSQRGVGTTTLVAVAELLAD
PPRPPLWLALDAHFQFALPALLARYQLPLPARAGVCGHVAQPPVLVRLRV
PTQPDAPDYELLAAASDDVLVTCCSSAHELLAAQRRVHAVADALPAVVEA
ACQRLVRAARRNLDQLDALEASAALMVTQPQAVAHSVWKIRRTGAALRRA
HHGVRALIEATERRSHTSPARVYSAQSAELLSSVREGAHSLLEVLLAVQN
NRMQETMQTLAVVTTVFVPLTFLAGIEGMNFRYMPELDGRWSYGAFWMIV
IVLVVLQLAFFRRKGWI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002523MgTranspt_CorA/ZnTranspt_ZntB
IPR045863CorA_TM1_TM2