Ggra6539.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra6539.t1 vs. uniprot
Match: A0A2V3IEU7 (5'-AMP-activated protein kinase subunit gamma-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEU7_9FLOR) HSP 1 Score: 345 bits (884), Expect = 3.670e-113 Identity = 195/311 (62.70%), Postives = 232/311 (74.60%), Query Frame = 0
Query: 175 MAAAARDDVMDVEA-------VARDADALLLDARAELHSHLRAHAVHRLVPPQSRVLIVDAAVPALCAFRALRDNDVRAAAVLHDGALCAMLTLATALHAACEPLLLARPLAAFVSRSAVLPLVSVSADAPQLHAARLLSQTASPPLAVMHGSEPLHWLFAERLLALLEPRFRDAPFLQCTIRTLRIGRYSDITTADVSMRVHDAARIMVARGLDSLPVTANGVVCGVLDGELVGAAXXXXXXXXXXADVPSVAAAQIAAFMRPAAVCSRDDTLHAVLSKLGHGCRRVFVADQQRVV-GVIGLRHLLRFFL 477
MA +D M+VEA A DALL+ AR++LH +L +HAVH LVP SRVLIVDA + AFRAL +NDVRAAAVLH+G+LC MLTL +ALH AC+ LL+RPL FV +SAV P +SVSADA QLHAARLLSQT SPPLAVMHGSE LHWLFAERLLALLEPRFRDAPFL+ +I +L++GRY+D+ TAD+ MRV DAAR+M++RGLDSLPVTA G V GVLDGE+VGAA ++ AFM+ AVC+R++ L +V+ KL G RRVFVAD+QRVV GVIGL HLLRFFL
Sbjct: 1 MATETSEDAMEVEAHYSVPTSPAPHIDALLVTARSQLHQYLSSHAVHELVPAHSRVLIVDANICTQHAFRALGENDVRAAAVLHNGSLCGMLTLTSALHVACDSQLLSRPLYTFVQQSAVQPFISVSADAAQLHAARLLSQTGSPPLAVMHGSEALHWLFAERLLALLEPRFRDAPFLRYSIGSLQLGRYTDLVTADMRMRVEDAARVMISRGLDSLPVTAGGRVVGVLDGEVVGAAAAAGGIGG-----------EVCAFMQQGAVCAREEALGSVIGKLRDGWRRVFVADEQRVVIGVIGLGHLLRFFL 300
BLAST of Ggra6539.t1 vs. uniprot
Match: A0A2V3IEU2 (Protein LSM14-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEU2_9FLOR) HSP 1 Score: 134 bits (338), Expect = 3.860e-31 Identity = 75/108 (69.44%), Postives = 76/108 (70.37%), Query Frame = 0
Query: 1 MATQQPQXXXXXXHAAPSXXPSXXXXXXXXXXXXSVPYVGSRISLISKSAIRYVGTLYTIDTGASTVALKDVRSFGTEGRSRAGGPVQPSDRVFSYIVFHGADIRDLH 108
MATQQP AA S S PYVGSRISLISKSAIRYVGTLYTIDT ASTVALKDVRS+GTEGR R GGPVQPS VFSYIVFHG DIRDLH
Sbjct: 1 MATQQPPRPPAAAPAARSSPASQP------------PYVGSRISLISKSAIRYVGTLYTIDTNASTVALKDVRSYGTEGRPREGGPVQPSTHVFSYIVFHGPDIRDLH 96
BLAST of Ggra6539.t1 vs. uniprot
Match: protein LSM14 homolog A-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F07F70 (protein LSM14 homolog A-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F07F70) HSP 1 Score: 101 bits (251), Expect = 7.250e-21 Identity = 57/101 (56.44%), Postives = 67/101 (66.34%), Query Frame = 0
Query: 36 VPYVGSRISLISKSAIRYVGTLYTIDTGASTVALKDVRSFGTEGRSRAGGPVQPSDRVFSYIVFHGADIRDLHNERMERPEQAPVAPLYDRNKSFFDELVP 136
VPY+GS+ISLISK+ IRY G LYTIDT STVAL VRSFGTE R PV P D VF YI+F GADI+DLH E P+ P APL ++ + + P
Sbjct: 5 VPYIGSKISLISKAEIRYEGILYTIDTKESTVALAKVRSFGTEDRP-TDRPVAPRDEVFEYIIFRGADIKDLHV--CEPPK--PSAPLPPQDPAIVQQSAP 100
BLAST of Ggra6539.t1 vs. uniprot
Match: A0A2N1MR72 (LSM14 domain-containing protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2N1MR72_9GLOM) HSP 1 Score: 96.3 bits (238), Expect = 2.130e-20 Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = 0
Query: 36 VPYVGSRISLISKSAIRYVGTLYTIDTGASTVALKDVRSFGTEGRSRAGGPVQPSDRVFSYIVFHGADIRDLH-----NERMERPEQAPVAP 122
V Y+GS+ISLISKS IRYVG L++I++ STVAL+ VRS+GTEGR + PSD +F YIVF G+D++DLH ++ P Q P P
Sbjct: 4 VGYIGSKISLISKSDIRYVGILHSINSADSTVALEQVRSYGTEGRRGPAEEIPPSDNIFEYIVFRGSDVKDLHVCEAPAQQQSLPPQVPNDP 95
BLAST of Ggra6539.t1 vs. uniprot
Match: A0A3M7Q2B1 (LSM14-like protein (Fragment) n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7Q2B1_BRAPC) HSP 1 Score: 96.3 bits (238), Expect = 5.190e-20 Identity = 51/95 (53.68%), Postives = 61/95 (64.21%), Query Frame = 0
Query: 35 SVPYVGSRISLISKSAIRYVGTLYTIDTGASTVALKDVRSFGTEGRSRAGGPVQPSDRVFSYIVFHGADIRDLH----NERMERPEQAPVAPLYD 125
+ PY+GS+ISL+SK+ IRY G LYTIDT STVAL VRSFGTE R PV P D VF YI+F G+DI DLH ++P Q P + D
Sbjct: 3 TTPYLGSKISLVSKAKIRYEGILYTIDTNESTVALAKVRSFGTEDRP-TDRPVPPRDEVFEYIIFRGSDIEDLHVCEPYPAAKQPNQLPSGLMQD 96
BLAST of Ggra6539.t1 vs. uniprot
Match: A0A8C9VTY7 (LSM14 domain-containing protein n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9VTY7_SCLFO) HSP 1 Score: 94.7 bits (234), Expect = 5.270e-20 Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 0
Query: 37 PYVGSRISLISKSAIRYVGTLYTIDTGASTVALKDVRSFGTEGRSRAGGPVQPSDRVFSYIVFHGADIRDLHNERMERPEQAPVAPL 123
PY+GSRISLISK+ IRY G LYTIDT +TVAL VRSFGTEGR A PV P D ++ YI+F G+DI+D+ E P+ + PL
Sbjct: 6 PYIGSRISLISKAQIRYEGILYTIDTDNATVALAKVRSFGTEGR-HAERPVPPRDEIYEYIIFRGSDIKDI--TVCEPPKGMDLNPL 89
BLAST of Ggra6539.t1 vs. uniprot
Match: A0A8C9WED9 (LSM14 domain-containing protein n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9WED9_SCLFO) HSP 1 Score: 94.4 bits (233), Expect = 6.460e-20 Identity = 46/71 (64.79%), Postives = 55/71 (77.46%), Query Frame = 0
Query: 37 PYVGSRISLISKSAIRYVGTLYTIDTGASTVALKDVRSFGTEGRSRAGGPVQPSDRVFSYIVFHGADIRDL 107
PY+GSRISLISK+ IRY G LYTIDT +TVAL VRSFGTEGR A PV P D ++ YI+F G+DI+D+
Sbjct: 6 PYIGSRISLISKAQIRYEGILYTIDTDNATVALAKVRSFGTEGR-HAERPVPPRDEIYEYIIFRGSDIKDI 75
BLAST of Ggra6539.t1 vs. uniprot
Match: A0A671QHP5 (LSM family member 14B n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671QHP5_9TELE) HSP 1 Score: 94.0 bits (232), Expect = 7.500e-20 Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0
Query: 37 PYVGSRISLISKSAIRYVGTLYTIDTGASTVALKDVRSFGTEGRSRAGGPVQPSDRVFSYIVFHGADIRDL 107
PY+GS+ISLISK+ IRY G LYTIDT STVAL VRSFGTEGR PV P D VF YI+F G+DI+D+
Sbjct: 6 PYIGSKISLISKAQIRYEGILYTIDTENSTVALAKVRSFGTEGRP-TDRPVPPRDEVFEYIIFRGSDIKDI 75
BLAST of Ggra6539.t1 vs. uniprot
Match: A0A4W4DS42 (LSM14 domain-containing protein n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4DS42_ELEEL) HSP 1 Score: 94.4 bits (233), Expect = 7.880e-20 Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0
Query: 37 PYVGSRISLISKSAIRYVGTLYTIDTGASTVALKDVRSFGTEGRSRAGGPVQPSDRVFSYIVFHGADIRDL 107
PY+GS+ISLISK+ IRY G LYTIDT STVAL VRSFGTEGR PV P D VF YI+F G+DI+D+
Sbjct: 6 PYIGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEGRP-TDRPVPPRDEVFDYIIFRGSDIKDI 75
BLAST of Ggra6539.t1 vs. uniprot
Match: A0A4W4DS09 (LSM14 domain-containing protein n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4DS09_ELEEL) HSP 1 Score: 94.4 bits (233), Expect = 9.610e-20 Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0
Query: 37 PYVGSRISLISKSAIRYVGTLYTIDTGASTVALKDVRSFGTEGRSRAGGPVQPSDRVFSYIVFHGADIRDL 107
PY+GS+ISLISK+ IRY G LYTIDT STVAL VRSFGTEGR PV P D VF YI+F G+DI+D+
Sbjct: 6 PYIGSKISLISKAQIRYEGILYTIDTDNSTVALAKVRSFGTEGRP-TDRPVPPRDEVFDYIIFRGSDIKDI 75 The following BLAST results are available for this feature:
BLAST of Ggra6539.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6539.t1 ID=Ggra6539.t1|Name=Ggra6539.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=481bpback to top |