Ggra6584.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra6584.t1 vs. uniprot
Match: A0A2V3IPV7 (THO complex subunit 4C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPV7_9FLOR) HSP 1 Score: 407 bits (1047), Expect = 4.890e-141 Identity = 219/290 (75.52%), Postives = 231/290 (79.66%), Query Frame = 0
Query: 1 MLDHHDSAXXXXXYPSSFRRRPIVVRDPKTGETRLVGGGRR-PASGFPPSXXXXXXXXPP--SYRNRSGGDADYDRRPGAYPPFDDQGRAPIMKIVSGYRGRQIVVRDPSRRMQPQAPAHGANLGVRGGVRKNYYDRRGTRSSPYSEEYDEDRRADYFEGEDDDRLYSHERDSDYDRDHHMNEYDRGFDAQPGYYRRNRSEVQNDEEDLAGKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNGL 287
MLDHHDSA +PSSFRRRPIVVRDPKTGETRLVGGG PA+ P PP YR RSG DADYDR+ YPPFDDQGRAPIMKIVSGYRGRQIVVRDPSRR QP A GANLGVRGGVRKNYYDR+GTRSSPYSEEY++DRR DY DH MN+YDR ++ Q GYYRRNRS+VQND+EDL GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDR+GNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNGL
Sbjct: 6 MLDHHDSAPPPT-HPSSFRRRPIVVRDPKTGETRLVGGGPPGPAARRPNFSTASAPSQPPPSGYRYRSGFDADYDRQQNPYPPFDDQGRAPIMKIVSGYRGRQIVVRDPSRRPQPPAQPQGANLGVRGGVRKNYYDRKGTRSSPYSEEYEDDRRPDYXXXXXXXXXXXXXXXXXXXXDHRMNDYDRPYEGQHGYYRRNRSDVQNDDEDLTGKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDRDGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNGL 294
BLAST of Ggra6584.t1 vs. uniprot
Match: R7Q7Q7 (THO complex subunit 4-like n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7Q7_CHOCR) HSP 1 Score: 237 bits (604), Expect = 3.990e-73 Identity = 156/285 (54.74%), Postives = 183/285 (64.21%), Query Frame = 0
Query: 17 SFRRRPIVVRDPKTGETRLVGGGRRPASGFPPSXXXXXXXXPPSYRNRSGGDADYDRRPGAYPPFDDQGRAPIMKIVSGYRGRQIVVRDPSRR----MQPQAPAHGANLGVRGG-VRK-NYYDRRGTRSSPYSEEYDEDRR----ADYFEGEDDDR-LYSHERDSDYDRDHHMNEYDRGFDAQPGYYRRNRSEVQND---EEDLAGKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNGL 287
++RRRPIVVRDPKTG+TR++ GG + + YR DA F+D AP++KIVSGYRGRQIVVRDP++R + PQ A G LGVRGG VRK NYYDRRG R + YS E D+R A Y+E +++DR +Y RD YD + + G Y RN + N +DL GKVV+VDNLSDDVTT GLADLF MVG VKELRLLYDR+GNPNGSADIVFQ RADAE AIK+L NVPLNNRPMRLSMGNGL
Sbjct: 80 AYRRRPIVVRDPKTGDTRVIQGGHQRGASVGVGVTYGNGAARGGYRGMD--DA---------AEFED---APVVKIVSGYRGRQIVVRDPAKRGATDINPQHVA-GGPLGVRGGGVRKTNYYDRRGPRDTSYSPERYGDKRSGRGAPYYEDDEEDRRMYGRGRDQ-YDGSQMVAAHGYGDSRYDRDYYRNANAGHNGVPAHDDLTGKVVYVDNLSDDVTTRGLADLFSMVGTVKELRLLYDRQGNPNGSADIVFQHRADAEEAIKSLHNVPLNNRPMRLSMGNGL 348
BLAST of Ggra6584.t1 vs. uniprot
Match: THO complex subunit 4C-like n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B2972 (THO complex subunit 4C-like n=3 Tax=Camelina sativa TaxID=90675 RepID=UPI00053B2972) HSP 1 Score: 72.0 bits (175), Expect = 6.260e-11 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = 0
Query: 208 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNG 286
G V++ NL VT + +L+ +G +K + +DR G PNGSA++V+ RR+DA A+K +NV L+ RPMRL + G
Sbjct: 103 GTTVYITNLDQGVTNEDIRELYAEIGELKRYAVHFDRNGRPNGSAEVVYMRRSDAMLAMKKYNNVLLDGRPMRLEILGG 181
BLAST of Ggra6584.t1 vs. uniprot
Match: A0A0M0JT49 (Tho complex subunit 4 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JT49_9EUKA) HSP 1 Score: 69.3 bits (168), Expect = 4.950e-10 Identity = 33/80 (41.25%), Postives = 55/80 (68.75%), Query Frame = 0
Query: 208 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGNGL 287
G V V NL+ +VT+ + +LFG +GA+K + LL +G+ G A +VF+R+ADAE A++ + VPL+ RP+++S+ + L
Sbjct: 85 GTTVKVANLAFNVTSEDIEELFGEIGALKSVSLLTKEDGSSRGMALVVFKRKADAETALEKYNGVPLDGRPLKISLQSNL 164
BLAST of Ggra6584.t1 vs. uniprot
Match: A0A8J2NV81 (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2NV81_9HEXA) HSP 1 Score: 68.6 bits (166), Expect = 7.860e-10 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 0
Query: 211 VFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSMGN 285
+ + NL V+ + +LFG VG ++ + YDR G G AD+ F+RR DA+AAI+ D VPL+ RPM +S N
Sbjct: 112 ITISNLHYGVSDADIIELFGEVGNIRYASVHYDRSGRSMGKADVTFERRVDAQAAIQQYDGVPLDGRPMAISWAN 186
BLAST of Ggra6584.t1 vs. uniprot
Match: A0A834LPE5 (RRM domain-containing protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834LPE5_RHOSS) HSP 1 Score: 68.2 bits (165), Expect = 9.130e-10 Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 208 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 283
G +F+ NL V+ + +LF VG VK + YDR G G+A++VF RR DAEAA+K +NV L+ +PM++ +
Sbjct: 93 GTKLFISNLDYGVSGEDVKELFAEVGDVKRYSIHYDRSGRSKGTAEVVFSRRKDAEAAVKRYNNVQLDGKPMKIEI 168
BLAST of Ggra6584.t1 vs. uniprot
Match: A0A2I4DVX9 (THO complex subunit 4D-like n=3 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4DVX9_JUGRE) HSP 1 Score: 68.6 bits (166), Expect = 1.040e-9 Identity = 31/76 (40.79%), Postives = 50/76 (65.79%), Query Frame = 0
Query: 208 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 283
G +++ NL VT + +LF +G +K + YD+ G PNGSA++V+ RR+DA AA+K +NV L+ +PMR+ +
Sbjct: 95 GTKLYISNLDYGVTNEDIRELFCEIGDLKRYAVHYDKNGRPNGSAEVVYTRRSDAVAALKRYNNVLLDGKPMRIEI 170
BLAST of Ggra6584.t1 vs. uniprot
Match: A0A396IQW2 (Putative chromatin target of PRMT1 protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396IQW2_MEDTR) HSP 1 Score: 65.9 bits (159), Expect = 3.510e-9 Identity = 29/73 (39.73%), Postives = 49/73 (67.12%), Query Frame = 0
Query: 211 VFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 283
++V NL VT + +LF +G +K + YD+ G+P GSA++V+ RR+DA AA+K +NV L+ +PM++ +
Sbjct: 31 LYVSNLDRGVTNEDIRELFSELGELKRYAVHYDKNGHPTGSAEVVYNRRSDAFAALKRYNNVLLDGKPMKIEI 103
BLAST of Ggra6584.t1 vs. uniprot
Match: A0A834HD54 (RRM domain-containing protein n=2 Tax=Rhododendron TaxID=4346 RepID=A0A834HD54_RHOSS) HSP 1 Score: 66.2 bits (160), Expect = 3.780e-9 Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 208 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 283
G ++V NL V+ + +LF VG +K + YDR G G+A++VF RR DA+AA+K +NV L+ +PM++ +
Sbjct: 82 GTKLYVSNLDYGVSNDDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRQDAQAAVKRYNNVQLDGKPMKIEV 157
BLAST of Ggra6584.t1 vs. uniprot
Match: A0A7J0GR35 (RNA-binding (RRM/RBD/RNP motifs) family protein n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GR35_9ERIC) HSP 1 Score: 65.1 bits (157), Expect = 4.390e-9 Identity = 29/76 (38.16%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 208 GKVVFVDNLSDDVTTTGLADLFGMVGAVKELRLLYDREGNPNGSADIVFQRRADAEAAIKTLDNVPLNNRPMRLSM 283
G +++ NL V+ + +LF VG +K + YDR G G+A+IV+ RR DA+AA+K +NV L+ +PM++ +
Sbjct: 81 GTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEIVYSRRQDAQAAVKRYNNVQLDGKPMKIEI 156 The following BLAST results are available for this feature:
BLAST of Ggra6584.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6584.t1 ID=Ggra6584.t1|Name=Ggra6584.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=288bpback to top |