Ggra6439.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6439.t1
Unique NameGgra6439.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length275
Homology
BLAST of Ggra6439.t1 vs. uniprot
Match: A0A2V3IH90 (APH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH90_9FLOR)

HSP 1 Score: 160 bits (406), Expect = 1.230e-42
Identity = 98/303 (32.34%), Postives = 148/303 (48.84%), Query Frame = 0
Query:    2 VDVNLTTTKYERTGCPEQVSFSFRSVIYRIPTTEGYVFLKVVPTESIQILYTMGIKRLFPSVTLSVIRSSLSQNMLLASDLGADLEELCFVPSHSTLMKGYDKKSEIARKVFSEWARVQHVASNHVGELVGAGLPRID-----------------------------------MEDVFEQWSTLSLPLTLIHGDLNAGNIAHPGDIGTQFIFFDWGSSFVGFPFLELLEKELYPLFMHDHFYFYIQEWRKFCD-DKRRPFDVTARTRPFSYLIRAIREVQLDIHPLAIQKDVVTENVEGFCDA 268
            VD +L  T Y RTGCP+QV FS+ S +YRIPT  GYVF+K V  +S +I  T  I    P V+ S +  +   N L   D G  L + CF  +      GY+    ++  V   WAR Q  +S+ + +LV  G+P  D                                   +E VF  W  + LP TL+HGDLN  N+A P   GT F+FFDW  S++G PFL+LL+++  P+F     +  ++ W K+     ++  ++   T+P  +L+ AI E++    P   +K  V+  ++ F +A
Sbjct:  162 VDESLEGTSYVRTGCPQQVRFSYHSTVYRIPTATGYVFVKYVSEKSTEIPKTSVITGCLPEVSQSPMCINTKLNALFTVDFGMPLTDTCFAMNRPAA--GYENVLSVSGLVLERWARTQQQSSSFLADLVAGGVPVRDEEWIWRGLLRVETFANRNLSSVPGISCQLQFGRSYLECVFRVWKDIPLPNTLVHGDLNESNMAQPEGPGTSFLFFDWELSYIGHPFLDLLDEKWNPVFRGVGKF--LESWAKYAGISLKKAEELAIWTKPVGHLVTAIIELENPSLPEVFRKSSVSSGIQSFIEA 460          
BLAST of Ggra6439.t1 vs. uniprot
Match: A0A511MVN4 (APH domain-containing protein n=2 Tax=Deinococcus cellulosilyticus TaxID=401558 RepID=A0A511MVN4_9DEIO)

HSP 1 Score: 61.2 bits (147), Expect = 4.590e-7
Identity = 58/210 (27.62%), Postives = 96/210 (45.71%), Query Frame = 0
Query:   13 RTGCPEQVSFSFRSVIYRIPTTEGYVFLKVVPTE-SIQILYTMGIKRLFPSVTLSVIRSSLSQNMLLASDLGADL----EELCFVPSHSTLMKG-------------YDKKSEI----ARKVFSEWAR--VQHVASNHVGELVGAGLPRIDMEDVFEQWSTLSLPLTLIHGDLNAGNIAHPGDIGTQFIFFDWGSSFVGFPFLELLEKEL 198
            RTG PE +     SV+YRIPT+EG V+LK VP   + + L T  +  L       V+      +  L +  G D     + +  V   +T+ +               D++ ++     R++F++ A   ++++ S    + +   LP   +E + +      +P TLIHGDL+ GN+   GD  T   F DW    +G PFL+L  + L
Sbjct:  148 RTGQPEMIKAWQISVLYRIPTSEGPVYLKQVPAFFAREGLLTSWLHTLNAGAAPEVLALDPEHHRFLMAGAGNDPVGPDKAISAVKLFATVQRQTEHHHEHLLEVGCLDRRCKVLKEQVRELFADDAALGIRNLLSAEEQQTLKTALP--GLEQLLDDLHNSPIPTTLIHGDLHLGNVISAGDSLT---FLDWSDGALGHPFLDLNSEYL 352          
The following BLAST results are available for this feature:
BLAST of Ggra6439.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IH901.230e-4232.34APH domain-containing protein n=1 Tax=Gracilariops... [more]
A0A511MVN44.590e-727.62APH domain-containing protein n=2 Tax=Deinococcus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 106..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:11566..12494 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6439.t1Ggra6439.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 11566..12494 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6439.t1 ID=Ggra6439.t1|Name=Ggra6439.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=275bp
MVDVNLTTTKYERTGCPEQVSFSFRSVIYRIPTTEGYVFLKVVPTESIQI
LYTMGIKRLFPSVTLSVIRSSLSQNMLLASDLGADLEELCFVPSHSTLMK
GYDKKSEIARKVFSEWARVQHVASNHVGELVGAGLPRIDMEDVFEQWSTL
SLPLTLIHGDLNAGNIAHPGDIGTQFIFFDWGSSFVGFPFLELLEKELYP
LFMHDHFYFYIQEWRKFCDDKRRPFDVTARTRPFSYLIRAIREVQLDIHP
LAIQKDVVTENVEGFCDAVERISG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom_sf