Ggra6512.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6512.t1
Unique NameGgra6512.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length528
Homology
BLAST of Ggra6512.t1 vs. uniprot
Match: A0A3R7EHQ0 (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7EHQ0_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.920e-8
Identity = 75/239 (31.38%), Postives = 106/239 (44.35%), Query Frame = 0
Query:  294 DLERTLETVHETMKQCQQRLKNAALLRNTIDIRPITYNQTRWFVKFHMLERFLRIRDELIEISQDPQSGLD----INTSDTFKRKVGRYCIQMEQINYSTRELQTRKLLLLYCRNVLCLLLEDVESGFHVSNSPFHLCFLKDNYIGTDANIMHDAFFESGVSKIQENWVSDMSAGEKHACQKLLLPVEEPEDDQNGVVDSLSSYRNRLQHWKRRKVATGAS-YMNCDFILVSVAEVERL 527
            D E  L  VH  MK+    +  AA LR    + P   N+TRW     ML R++    ELI     PQ GLD    +  +    R V     Q+  +N  T  LQ + L L   R    LL +DV     V      +C      +G+DA+I+ D  FESGV K+ ++  + ++  E+ A   L +P   P     G  DS+S     L   KRRK+    S Y++C F+  +    ERL
Sbjct:  139 DYEDLLCAVHAIMKKLSNIIP-AAKLRRMTPLCPKQRNKTRWSSSVAMLARYV----ELILFL--PQLGLDDIDMLLHNSRQDRDVELLIAQLTDLNSVTLALQDKSLTLADVR----LLFDDVV----VQYPGAEVC------LGSDASIVEDPTFESGVVKVLQHMEASLNEDERMAIALLSMP-SMPNGGYVGDTDSMSMATRAL---KRRKLLQARSNYLDCRFLRPTSNMCERL 352          
BLAST of Ggra6512.t1 vs. uniprot
Match: A0A418CHH8 (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CHH8_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.590e-7
Identity = 68/217 (31.34%), Postives = 97/217 (44.70%), Query Frame = 0
Query:  316 AALLRNTIDIRPITYNQTRWFVKFHMLERFLRIRDELIEISQDPQSGLD----INTSDTFKRKVGRYCIQMEQINYSTRELQTRKLLLLYCRNVLCLLLEDVESGFHVSNSPFHLCFLKDNYIGTDANIMHDAFFESGVSKIQENWVSDMSAGEKHACQKLLLPVEEPEDDQNGVVDSLSSYRNRLQHWKRRKVATGAS-YMNCDFILVSVAEVERL 527
            AA LR    + P   N+TRW     ML R++    ELI     PQ GLD    +  +    R V     Q+  +N  T  LQ + L L   R    LL +DV     V      +C      +G+DA+I+ D  FESGV K+ ++  + ++  E+ A   L +P   P     G  DS+S     L   KRRK+    S Y++C F+  +    ERL
Sbjct:   10 AAKLRRMTPLCPKQRNKTRWSSSVAMLARYV----ELILFL--PQLGLDDIDMLLHNSRQDRDVELLIAQLTDLNSVTLALQDKSLTLADVR----LLFDDVV----VQYPGAEVC------LGSDASIVEDPTFESGVVKVLQHMEASLNEDERMAIALLSMP-SMPNGGYVGDTDSMSMATRAL---KRRKLLQARSNYLDCRFLRPTSNMCERL 202          
BLAST of Ggra6512.t1 vs. uniprot
Match: W2ZL12 (Uncharacterized protein (Fragment) n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2ZL12_PHYPR)

HSP 1 Score: 59.7 bits (143), Expect = 6.680e-6
Identity = 92/406 (22.66%), Postives = 166/406 (40.89%), Query Frame = 0
Query:   50 CKEPNQEIIFQKGKGFFNPFRHLNACVAAGDETHLQELYRENEQRKRQHPEDIFSNSFICKIPPNERAMYGYIKLIVMNNFPFTIVEDKNIKNSSKHNINFSIHT--IRRVLLKLTQLVEKRISLELLEAKKGAILHDGCTCGGVRYIGLYASYIPHIRSATLSNRDEGEVRVEFALLSCSPMAKVDSADEGEPRDTQEDAEAFDFAADTHVQHIRDMFRFYDIETSLWVVCQIADNLNQMVRITLDLERTLETVHETMKQCQQRLKNAALLRNTIDIRPITYNQTRWFVKFHMLERFLRIRDELIEISQDPQSGLDINTSDTFKRKVGRYCIQMEQINYSTRELQTRKLLLLYCRNVLCLLLEDVESGFHVSNSPFHLCFLKDNYIGTDANIMHDAFFESGVSKI 453
            CK  N+E     G G+ N   HL     AG     + +Y  ++         + +  F+ +       ++ +I+ +VM N P + VED   +  SK    +S+ T  +++ +  +   V +++  EL     G +L DG +  GV Y+G YA Y             +GEVRV   LL  SP+  +D                    AD H+Q   ++   Y  +     V         + +     E  L  VH+ M + ++   N A L+   ++ P+  N TRW   F M+ER++RIR ++ ++    +    +  +D   RK+      +++     + LQ  +  +   R    LL + + + + V             ++ + A I+H   FE+GV K+
Sbjct:   22 CKICNKERKQVPGSGYSNLLAHL-----AGKHEGYEAVYASSQSNSSS---SLQAFGFVSE---ESSHLFQWIQWVVMRNMPVSEVEDDLTRAMSKL---WSVTTKAVKKCMKGIPIRVGRKLEKEL-RTLFGLML-DGRSHAGVHYVGRYAVY-----------EADGEVRVP--LLGLSPL--MDGVQ----------------TADAHIQMFNNILDVYKQDRGYGGV--------PVGKYIAPHEAWLTEVHDLMVELRKE-NNLAELKKHTELLPVKRNVTRWSSTFAMVERYVRIRQDIKKVDAVEE----LIPTDGKHRKLLALLEHLKKFESVCKRLQRDETNMADVR----LLFDSLVAEYPVMGE----------HLKSAAKIVHTPAFEAGVVKV 353          
The following BLAST results are available for this feature:
BLAST of Ggra6512.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A3R7EHQ01.920e-831.38Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A418CHH81.590e-731.34Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
W2ZL126.680e-622.66Uncharacterized protein (Fragment) n=4 Tax=Phytoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR40866FAMILY NOT NAMEDcoord: 162..517

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:658003..659666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6512.t1Ggra6512.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 658003..659666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6512.t1 ID=Ggra6512.t1|Name=Ggra6512.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=528bp
MSSASPTPSPKQVVYAIAKYKRTELKTVKNKASKVVQVAHLVFKCPNQHC
KEPNQEIIFQKGKGFFNPFRHLNACVAAGDETHLQELYRENEQRKRQHPE
DIFSNSFICKIPPNERAMYGYIKLIVMNNFPFTIVEDKNIKNSSKHNINF
SIHTIRRVLLKLTQLVEKRISLELLEAKKGAILHDGCTCGGVRYIGLYAS
YIPHIRSATLSNRDEGEVRVEFALLSCSPMAKVDSADEGEPRDTQEDAEA
FDFAADTHVQHIRDMFRFYDIETSLWVVCQIADNLNQMVRITLDLERTLE
TVHETMKQCQQRLKNAALLRNTIDIRPITYNQTRWFVKFHMLERFLRIRD
ELIEISQDPQSGLDINTSDTFKRKVGRYCIQMEQINYSTRELQTRKLLLL
YCRNVLCLLLEDVESGFHVSNSPFHLCFLKDNYIGTDANIMHDAFFESGV
SKIQENWVSDMSAGEKHACQKLLLPVEEPEDDQNGVVDSLSSYRNRLQHW
KRRKVATGASYMNCDFILVSVAEVERL*
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