Ggra6510.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6510.t1
Unique NameGgra6510.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length339
Homology
BLAST of Ggra6510.t1 vs. uniprot
Match: A0A2V3J593 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J593_9FLOR)

HSP 1 Score: 297 bits (761), Expect = 2.890e-96
Identity = 170/291 (58.42%), Postives = 226/291 (77.66%), Query Frame = 0
Query:   48 PSLLLPLSVLLDQYAAELELHEASPVSAFSPSSSSLSSSLSPSLRKLASDAVRVSADTLARQSELKRWEQLHQASSHETERLSKLYADQQQHAHILDAQLSRSHRDMSRLQARHLLCMREVQQLRDCVATLHAAHTVDANINALLIGDQSCEIDELKRKLREADRHRQLLNKLLQRATPKGMPKREFNSPDAAQGGSSAEQRRRGQDRENVPINTASYSEGKIIAGLVRRVSSRDPIKRKELNRLQRSKQNLLDAYQRRNSTTLDNVVRRTSQMSVASATEFSGSPVQSAD 338
            PSL+ PL +LLDQYA EL+L E SPV+   PS + +SSS+    RKLA DAV +S +TL+RQ+EL+RW+Q  +AS+ E+++L  LY ++  ++  L AQLS S RDMS LQARHL C+REVQQLRDCV TLH AH +DA+IN+LLI DQ CEI+ELKR+L +ADRHRQLL KLLQRA PK + +RE +  +  +  SS+ +R R +++ +   +  + S+ K+I GLVRRVSSR+P+KR++L RLQ+S+++LLDAYQRRNSTTL+NVVRRTSQMS+ASAT +S SPV+S D
Sbjct:   45 PSLVFPLGLLLDQYAVELDLDEDSPVTQSPPSPTQISSSM----RKLAFDAVHMSNETLSRQAELRRWQQWQRASAEESQKLHNLYQEELANSERLSAQLSGSRRDMSTLQARHLACLREVQQLRDCVGTLHTAHKLDASINSLLIDDQECEIEELKRRLGDADRHRQLLRKLLQRAAPKVLLRRELDIKNEERYRSSSNRRMRTREQGSTYTDVDTSSDAKVINGLVRRVSSRNPVKRRQLARLQKSRKHLLDAYQRRNSTTLENVVRRTSQMSIASATAYSDSPVRSTD 331          
BLAST of Ggra6510.t1 vs. uniprot
Match: A0A2V3IGX6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGX6_9FLOR)

HSP 1 Score: 234 bits (596), Expect = 3.050e-71
Identity = 149/303 (49.17%), Postives = 202/303 (66.67%), Query Frame = 0
Query:   48 PSLLLPLSVLLDQYAAELELHEASPVSAFSPSSSSLSSSLSPSLRKLASDAVRVSADTLARQSELKRWEQLHQASSHETERLSKLYADQQQHAHILDAQLSRSHRDMSRLQARHLLCMREVQQLRDCVATLHAAHTVDANINALLIGDQSCEIDELKRKLREADRHRQLLNKLLQRATPKGMPKREFNSPDAAQGGSSAEQRRRGQDRENVPINTASYSEGKIIAGLVRRVSSRDPIKRKELNRLQRSKQNLLDAYQRRNS------------TTLDNVVRRTSQMSVASATEFSGSPVQSAD 338
            PS   PL+VLLDQYA EL+L +A  V+  SPS  S+S    P++RKLA DAV +S +TL +Q+EL++WE+    SS E +RLS LY  +  ++  L+AQLS S  DM+ LQARHL+C+R+V+QLRDCV+TLHAAH +DA+IN+LLI DQ  EI ELK +L +ADRHRQLL KLL R  PK + +R+    +      ++ +R R +++ N P  T + S   +++GL RRVSS   +K K+L +LQ+SKQ+LLDA+Q+RNS            TTLDN V   S MS+A A  +S SP  S D
Sbjct:   45 PSSFYPLTVLLDQYAVELDLDDAYLVTRPSPSPPSIS----PTIRKLAFDAVGMSMETLTKQTELRQWEEWQCLSSKEAQRLSTLYQGELANSKKLNAQLSCSQNDMTTLQARHLICLRQVEQLRDCVSTLHAAHMLDASINSLLIEDQEREISELKSRLADADRHRQLLRKLLDRVAPKAVLQRQSEMTEKNVNRPNSGRRLRAREQGNTPAVTGAASSANVMSGLCRRVSSLSLVKGKKLAQLQKSKQDLLDAFQKRNSSLLHSRKVSPGSTTLDNAVFSISPMSIALAASYSESPGCSTD 343          
The following BLAST results are available for this feature:
BLAST of Ggra6510.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5932.890e-9658.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGX63.050e-7149.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 286..306
NoneNo IPR availableCOILSCoilCoilcoord: 193..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..262

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:576381..577397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6510.t1Ggra6510.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 576381..577397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6510.t1 ID=Ggra6510.t1|Name=Ggra6510.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=339bp
MHFPQPLPPQKPPPSPPSPRTPCDTSPPTTPPTTPPTTPSSSGCSSPPSL
LLPLSVLLDQYAAELELHEASPVSAFSPSSSSLSSSLSPSLRKLASDAVR
VSADTLARQSELKRWEQLHQASSHETERLSKLYADQQQHAHILDAQLSRS
HRDMSRLQARHLLCMREVQQLRDCVATLHAAHTVDANINALLIGDQSCEI
DELKRKLREADRHRQLLNKLLQRATPKGMPKREFNSPDAAQGGSSAEQRR
RGQDRENVPINTASYSEGKIIAGLVRRVSSRDPIKRKELNRLQRSKQNLL
DAYQRRNSTTLDNVVRRTSQMSVASATEFSGSPVQSAD*
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