Ggra6474.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6474.t1
Unique NameGgra6474.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length210
Homology
BLAST of Ggra6474.t1 vs. uniprot
Match: A0A2V3IIH3 (rRNA-processing protein fcf2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIH3_9FLOR)

HSP 1 Score: 228 bits (580), Expect = 1.410e-72
Identity = 120/209 (57.42%), Postives = 153/209 (73.21%), Query Frame = 0
Query:    1 MASKDRNLEKTRPIDPRGLTLPPTSHLNDTTDLDKDEGFVKQDLDFLRPSRKRRGRKGTQNTYQPDWSTLEEYSPKGEAPPVRNRD--EDEDWHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEFYSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSDRMSNRRIVDPACKKRRHRK 207
            MA    N E +  ++  GL LP T  L   + LD+ +  V Q+L FL  S +RR RK  Q     +W+ +E    + + PP       ED+ WH+MP A+LTPELQRDLR++ENRQ+LDPKRFYKSSGTGRKKGQLP+ VQVGT+LSGAHEF+SGRLLK++RRARIIDQVL+S++T+ YT SR++KLQSDRM+NRRIVDPA  K+R R+
Sbjct:    1 MAYTAMNNESSPLVNLNGLKLPTTKLLYQESQLDRQQKLVGQELHFLNRSTERRSRKTPQQVPPANWAEIEHDLKEAKPPPSVQTTFIEDDHWHEMPAANLTPELQRDLRIIENRQHLDPKRFYKSSGTGRKKGQLPTHVQVGTVLSGAHEFFSGRLLKRERRARIIDQVLASKETMHYTKSRYQKLQSDRMANRRIVDPAAMKKRRRR 209          
BLAST of Ggra6474.t1 vs. uniprot
Match: R7QDL7 (Fcf2 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDL7_CHOCR)

HSP 1 Score: 174 bits (441), Expect = 1.720e-51
Identity = 94/193 (48.70%), Postives = 130/193 (67.36%), Query Frame = 0
Query:   21 LPPTSHLNDTTDLDKDEGFVKQDLDFLRPSRKRRGRKGTQNTYQPDWSTLEEYSPKGE------APPVR---NRDEDEDWHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEFYSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSDRMSNRRIVDPACKKRR 204
            LP T+ L   + LD +E   K ++ FL P+ + + +K T    Q +W  L+E S  GE      +PP+     R  + DWH++P A +TP+LQ DLRV+ENRQ+LDPKRFYKSSG+GR+KGQLPS+V VGT++ GAHEFYS RL +K+RR  I+D+V+S  +   YT ++F+ +Q  R  N R+VDPA KKRR
Sbjct:   20 LPATASLFADSPLDVEEKAAKSEVGFLFPNHQEKPQKSTT---QGNWKALDE-SLSGETATALKSPPMSASARRAAETDWHEIPEARMTPQLQNDLRVIENRQHLDPKRFYKSSGSGRRKGQLPSKVHVGTVVVGAHEFYSARLTRKERRRTILDEVMSDGRITNYTKNKFKSIQKARQGNTRVVDPAAKKRR 208          
BLAST of Ggra6474.t1 vs. uniprot
Match: A0A8H6A2G9 (Fcf2 domain-containing protein n=2 Tax=Aspergillus TaxID=5052 RepID=A0A8H6A2G9_ASPBU)

HSP 1 Score: 94.7 bits (234), Expect = 2.930e-20
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 0
Query:   90 DWHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEFYSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSDRMS 191
            DW D+P  +LTPEL+RDL+++  R  LDPKR YK       K Q P   Q+GTI+ G  EF+SGR+ KKDR+   +++VL+ E+  +   S++R +Q+ + S
Sbjct:  125 DWFDLPKTELTPELKRDLQLLRMRSVLDPKRHYKKENA---KAQPPKYSQIGTIIEGPTEFFSGRITKKDRKKTFVEEVLAQERQTRRFESKYRDIQTSKQS 223          
BLAST of Ggra6474.t1 vs. uniprot
Match: I1IEJ6 (Fcf2 domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IEJ6_BRADI)

HSP 1 Score: 92.8 bits (229), Expect = 6.190e-20
Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = 0
Query:   91 WHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEFYSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSDR 189
            W DMP   +TPEL++DL +++ R  +DPKR +K SG   K   LP   Q+GT++  AHEF+S RL K++R+  ++D++LS +K   Y   + R++Q  R
Sbjct:   78 WFDMPAPSITPELKKDLHILQLRHVMDPKRHFKRSG---KSKVLPKYFQIGTVIEPAHEFWSSRLTKRERKTTLVDELLSDQKLKNYRMGKVREIQETR 173          
BLAST of Ggra6474.t1 vs. uniprot
Match: A0A261XWU8 (Fcf2 domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XWU8_9FUNG)

HSP 1 Score: 96.7 bits (239), Expect = 6.560e-20
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   91 WHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEFYSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSDRMS 191
            W DMP A++TPEL+RDL++++ R  LDPKR YK  G   KK  +P   QVGT++ G  EF+S RL  K+R+  I+D++++  +  QY   +F  +Q  RMS
Sbjct:  312 WFDMPKAEMTPELERDLQILKLRNVLDPKRHYKKEG---KKQSMPEYFQVGTVIEGPTEFFSSRLTNKERKKTIVDELMADHERRQYYKRKFLDIQDSRMS 409          
BLAST of Ggra6474.t1 vs. uniprot
Match: A0A074ZFU4 (Fcf2 domain-containing protein (Fragment) n=1 Tax=Aureobasidium subglaciale (strain EXF-2481) TaxID=1043005 RepID=A0A074ZFU4_AURSE)

HSP 1 Score: 89.4 bits (220), Expect = 1.460e-19
Identity = 48/100 (48.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:   89 EDWHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEFYSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSD 188
            E W++MP  DLTPEL+RDL++++ R  LDP R YK  G    K + P   QVGTI+ G  E++SGRL  K+R+   +D+VLS EK     T RF+K  SD
Sbjct:    7 EQWYNMPRTDLTPELKRDLQLLKMRNVLDPHRHYKKDGG---KMRAPDYSQVGTIVEGPTEYFSGRLNNKERKKTFVDEVLSREKD----TGRFKKKYSD 99          
BLAST of Ggra6474.t1 vs. uniprot
Match: A0A218ZC22 (Fcf2 domain-containing protein n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218ZC22_9HELO)

HSP 1 Score: 92.4 bits (228), Expect = 1.500e-19
Identity = 44/102 (43.14%), Postives = 67/102 (65.69%), Query Frame = 0
Query:   90 DWHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEFYSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSDRMS 191
            DW +MP  +LTPEL+RDL+++  R  LDPKR YK      +K Q+P   QVGT++ G  E++S RL+KKDR   ++++VL+ EK      S+++ +Q  +MS
Sbjct:  104 DWFNMPRTNLTPELKRDLQLLRMRDVLDPKRHYKKDN---RKQQIPEYSQVGTVIQGPTEYFSSRLMKKDRTRTLVEEVLAGEKASGRFKSKYKDIQDAKMS 202          
BLAST of Ggra6474.t1 vs. uniprot
Match: A0A1Q5TEB2 (rRNA-processing protein fcf2 n=1 Tax=Penicillium subrubescens TaxID=1316194 RepID=A0A1Q5TEB2_9EURO)

HSP 1 Score: 92.0 bits (227), Expect = 2.010e-19
Identity = 46/118 (38.98%), Postives = 74/118 (62.71%), Query Frame = 0
Query:   90 DWHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEFYSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSDRMSNRRIVDPACKKRRHRK 207
            DW ++P  DLTPEL+RDL+++  R  LDPKR YK       K ++P   QVGTI+ G  EF+SGR+ KKDR+   +++ L+ E+  +   S++R +Q+ + S ++      + +R+RK
Sbjct:  104 DWFNLPKTDLTPELKRDLQLIRMRSVLDPKRHYKKENG---KAKIPEFSQVGTIIQGPTEFFSGRIAKKDRKKNFVEEALALERQNRRFESKYRDIQATKTSGKKAFYKDLQAKRNRK 218          
BLAST of Ggra6474.t1 vs. uniprot
Match: S7ZBL6 (Fcf2 domain-containing protein n=1 Tax=Penicillium oxalicum (strain 114-2 / CGMCC 5302) TaxID=933388 RepID=S7ZBL6_PENO1)

HSP 1 Score: 91.7 bits (226), Expect = 2.820e-19
Identity = 46/118 (38.98%), Postives = 75/118 (63.56%), Query Frame = 0
Query:   90 DWHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEFYSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSDRMSNRRIVDPACKKRRHRK 207
            DW ++P  +LTPEL+RDL+++  R  LDPKR YK       K ++P   QVGTI+ G  EF+SGR+ KKDR+   +++VL+ E+  +   S++R +Q+ + S ++      + +R+RK
Sbjct:  104 DWFNLPKTELTPELKRDLQLIRMRSVLDPKRHYKKENG---KAKIPEFSQVGTIVEGPTEFFSGRITKKDRKKNFVEEVLAVERQNRRFESKYRDIQAHKTSGKKAFYKDLQAKRNRK 218          
BLAST of Ggra6474.t1 vs. uniprot
Match: uncharacterized protein LOC123544593 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA11E (uncharacterized protein LOC123544593 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA11E)

HSP 1 Score: 88.6 bits (218), Expect = 3.700e-19
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 0
Query:   67 WSTLEEYS---PKGEAPPVRNRDEDEDWHDMPVADLTPELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSR 137
            W++L   S   P    PP R    D+DWH++PVA +TPEL+RDL ++ENR +LDPKRFYKS+GTGRK+G+LP R
Sbjct:   43 WASLAAASAIPPPAPTPPPR----DQDWHEIPVAKMTPELKRDLVLIENRAHLDPKRFYKSAGTGRKRGELPQR 112          
The following BLAST results are available for this feature:
BLAST of Ggra6474.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIH31.410e-7257.42rRNA-processing protein fcf2 n=1 Tax=Gracilariopsi... [more]
R7QDL71.720e-5148.70Fcf2 domain-containing protein n=1 Tax=Chondrus cr... [more]
A0A8H6A2G92.930e-2043.14Fcf2 domain-containing protein n=2 Tax=Aspergillus... [more]
I1IEJ66.190e-2041.41Fcf2 domain-containing protein n=1 Tax=Brachypodiu... [more]
A0A261XWU86.560e-2044.55Fcf2 domain-containing protein n=1 Tax=Bifiguratus... [more]
A0A074ZFU41.460e-1948.00Fcf2 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A218ZC221.500e-1943.14Fcf2 domain-containing protein n=1 Tax=Marssonina ... [more]
A0A1Q5TEB22.010e-1938.98rRNA-processing protein fcf2 n=1 Tax=Penicillium s... [more]
S7ZBL62.820e-1938.98Fcf2 domain-containing protein n=1 Tax=Penicillium... [more]
uncharacterized protein LOC123544593 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA11E3.700e-1956.76uncharacterized protein LOC123544593 n=1 Tax=Merce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014810Fcf2 pre-rRNA processing, C-terminalPFAMPF08698Fcf2coord: 86..179
e-value: 6.3E-26
score: 90.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..209
IPR039883Fcf2/DNTTIP2PANTHERPTHR21686UNCHARACTERIZEDcoord: 84..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:224771..225400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6474.t1Ggra6474.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 224771..225400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6474.t1 ID=Ggra6474.t1|Name=Ggra6474.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=210bp
MASKDRNLEKTRPIDPRGLTLPPTSHLNDTTDLDKDEGFVKQDLDFLRPS
RKRRGRKGTQNTYQPDWSTLEEYSPKGEAPPVRNRDEDEDWHDMPVADLT
PELQRDLRVVENRQYLDPKRFYKSSGTGRKKGQLPSRVQVGTILSGAHEF
YSGRLLKKDRRARIIDQVLSSEKTVQYTTSRFRKLQSDRMSNRRIVDPAC
KKRRHRKRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014810Fcf2_C
IPR039883Fcf2/DNTTIP2