Ggra5104.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5104.t1 vs. uniprot
Match: A0A2V3J6V5 (Transcription elongation factor TFIIS n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6V5_9FLOR) HSP 1 Score: 331 bits (848), Expect = 7.900e-113 Identity = 171/228 (75.00%), Postives = 192/228 (84.21%), Query Frame = 0
Query: 1 MADIKKKLSATKTIDKKARTPTTPRTQIIAEDAEKPPSS-SPKSVGAT---ENSKEYDVKHPTGDKMRDKVRNLLAGALFKKDEHHVKSEDEANVIAYAIENAMFEKFEGSGQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
MAD+KKKLSATKTIDKK R PTTP+ A P SP +V ++ +YDVKHPTGDKMRDKVR+LLA ALFKKDE HV S+D+A ++A AIE+AMF KF+G+GQ+YKQKYRS+SFNLKDPKNGKLRS VL R I P EL+DMSST+LAND+LRKRRAEV+EKMTRDAMPYTQQ ASTDRFKCGKCK+RKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF
Sbjct: 1 MADVKKKLSATKTIDKKTRPPTTPKILSSAXXXXXXPLDVSPSTVSVPPPPDHDSQYDVKHPTGDKMRDKVRSLLADALFKKDEKHVSSKDDAQLVANAIEHAMFIKFDGNGQSYKQKYRSISFNLKDPKNGKLRSLVLTRQINPQELLDMSSTELANDELRKRRAEVQEKMTRDAMPYTQQAASTDRFKCGKCKQRKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 228
BLAST of Ggra5104.t1 vs. uniprot
Match: R7QEZ4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEZ4_CHOCR) HSP 1 Score: 266 bits (681), Expect = 2.440e-87 Identity = 137/230 (59.57%), Postives = 176/230 (76.52%), Query Frame = 0
Query: 4 IKKKLSATKTIDKKART----PTTPRTQIIAEDA-----EKPPSSSPKSVGATENSKEYDVKHPTGDKMRDKVRNLLAGALFKKDEHHVKSEDEANVIAYAIENAMFEKFEGSGQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
++KKLSA+K I+KKAR+ P R + A+ A E+ S+ ++E EYDV HPT +K+RDK+R+LL ALFKKDE VK ++A ++A AIE A+++K +G+G YK KYR++SFN+KDPKN KLR A+L R + PSEL++MS+ DLAND+LRK R EVR KMTRDAMP+++QEASTD FKCGKCK+RKCTYYQMQTRSADEPLTTFV+CV+C NRWRF
Sbjct: 5 LEKKLSASKVINKKARSGDVSPHVSRDALKADAAAAATGERKDDSTQNETNSSEFDAEYDVPHPTNEKIRDKIRSLLTDALFKKDEDFVKDRNDAQIVANAIEAALYDKMDGNGAPYKNKYRNISFNIKDPKNAKLRMALLYRHLPPSELLNMSNHDLANDELRKNREEVRAKMTRDAMPFSKQEASTDMFKCGKCKQRKCTYYQMQTRSADEPLTTFVSCVHCGNRWRF 234
BLAST of Ggra5104.t1 vs. uniprot
Match: A0A7S2ZFF0 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFF0_9RHOD) HSP 1 Score: 171 bits (433), Expect = 3.570e-50 Identity = 86/165 (52.12%), Postives = 119/165 (72.12%), Query Frame = 0
Query: 61 DKMRDKVRNLLAGALFKKDEHHVKSEDEANVIAYAIENAMFEKFEGSGQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPY--TQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWR 223
D +R +V+ +LA AL+K+ E HV+S ++A IA +E M+ F G+ QAYK K+R+L+FNLKD KN +LRS V+ + P LI MSS +LAN + R+ ++ + R+A Y ++ A+TD FKCGKCK+RKCTYYQ+QTRSADEPLT+FVTC+ CNNRW+
Sbjct: 39 DPVRKRVKEMLANALYKESEGHVESLEKAMEIAVKLELEMYTVFHGTNQAYKDKFRTLNFNLKDEKNERLRSLVVSGAVGPERLITMSSQELANPERRESNTKIEKNNMREAQLYNPSKHAATTDLFKCGKCKQRKCTYYQLQTRSADEPLTSFVTCMVCNNRWK 203
BLAST of Ggra5104.t1 vs. uniprot
Match: C1NA42 (Transcription elongation factor n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1NA42_MICPC) HSP 1 Score: 172 bits (435), Expect = 5.450e-49 Identity = 90/168 (53.57%), Postives = 119/168 (70.83%), Query Frame = 0
Query: 60 GDKMRDKVRNLLAGALFKK---DEHHVKSEDEANVIAYAIENAMFEKFEGSGQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
GD +RD+ R LLA A+ + + + ED A A AIENAM ++ +G+ YK K+R LSFNLKDPKN LR +V I P+ L+D+S +L +D+ R A++RE T +A+ ++EASTD FKCGKCK+RKCTYYQ+QTRSADEP+TTFVTCVNC+NRW+F
Sbjct: 158 GDPLRDRTRELLAEAIAQAIGAPDVYASVEDVAQT-AIAIENAMHAQWSDTGKEYKAKFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPEELGSDERRNSNAKIREHATNEAVRGQKKEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVNCDNRWKF 324
BLAST of Ggra5104.t1 vs. uniprot
Match: A0A1X6P3X2 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P3X2_PORUM) HSP 1 Score: 161 bits (408), Expect = 6.030e-47 Identity = 87/162 (53.70%), Postives = 109/162 (67.28%), Query Frame = 0
Query: 63 MRDKVRNLLAGALFKKDEHHVKSEDEANVIAYAIENAMFEKFEGS-GQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWR 223
MRDKVR+L+A AL+K + V A A A+E AMF G AYK KYR LSFNLKD KN LRS VL D+ P+ L+ MS+ +LAN++ + R EV E M R+A P A+TD F+CGKCK+R+ TY+QMQTRSADEP+TTFV C+ C NRW+
Sbjct: 1 MRDKVRSLIASALYKDTDGLVADLAGAEPAAAAVEAAMFTATGTDVGGAYKSKYRQLSFNLKDAKNVALRSRVLRGDLTPAVLVGMSNEELANEETKAYRKEVAETMLREAQPGGNARATTDMFRCGKCKQRRTTYHQMQTRSADEPMTTFVCCLECGNRWK 162
BLAST of Ggra5104.t1 vs. uniprot
Match: transcription elongation factor TFIIS-like n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF9CAD6 (transcription elongation factor TFIIS-like n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF9CAD6) HSP 1 Score: 162 bits (409), Expect = 8.550e-45 Identity = 82/170 (48.24%), Postives = 116/170 (68.24%), Query Frame = 0
Query: 61 DKMRDKVRNLLAGALFK------KDEHHVKSEDEANVIAYAIENAMFEKFEGSGQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
D +RDK+R LL AL K +++ HV + + +A ++E+AMF+K S A K KYRS+ FN+KDPKN LR VLL +I P L+ M+ ++A+D ++ +++EK D +A+TD+FKCG+C++RKCTYYQMQTRSADEP+TT+VTCVNCNN W+F
Sbjct: 185 DSLRDKIRELLVEALSKVAGEVDEEDVHVVNACDPIRVAVSVESAMFDKLGRSNGAQKLKYRSIMFNIKDPKNPDLRRKVLLGEIKPERLVTMTPEEMASDARQQEINQIKEKALFDCERGGAPKATTDQFKCGRCRQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKF 354
BLAST of Ggra5104.t1 vs. uniprot
Match: A0A834Z4H7 (Transcription elongation factor n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A834Z4H7_9MAGN) HSP 1 Score: 162 bits (410), Expect = 1.200e-44 Identity = 85/170 (50.00%), Postives = 112/170 (65.88%), Query Frame = 0
Query: 61 DKMRDKVRNLLAGALFK-KDEHHVKSEDEANV-----IAYAIENAMFEKFEGSGQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
D MRDKVR LL+ A K E DEAN +A +E+AMFEK+ S A K KYRS+ FN+KDP N LR VLL + P L+ M+ ++A+D ++ +++EK D Q +A+TD+F+CG+C +RKCTYYQMQTRSADEP+TT+VTCVNCNN W+F
Sbjct: 215 DAMRDKVRELLSEAFSKVSSEADEDIRDEANACDPIRVAVTVESAMFEKWGRSNGAQKFKYRSIMFNIKDPNNPDLRRKVLLGHVKPERLLSMTPDEMASDQRQRENNQIKEKALFDCERGGQAKATTDQFRCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCNNHWKF 384
BLAST of Ggra5104.t1 vs. uniprot
Match: A0A7J7PD88 (Transcription elongation factor n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PD88_9CHLO) HSP 1 Score: 158 bits (400), Expect = 1.390e-44 Identity = 85/184 (46.20%), Postives = 116/184 (63.04%), Query Frame = 0
Query: 42 KSVGATENSKEYDVKHPTGDKMRDKVRNLLAGALFKKDEHHVKSEDEANVIAYAIENAMFEKF-EGSGQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
KS G+ + S TGD RD++R LL L + +D V A +E A++ +F + +G Y K RSLSFNLKDP N LR+ VL + P EL+DM +LA+D R+ ++R++ +A+ Q+ASTD FKCG+CK++KCTYYQMQTRSADEP+TTFVTCVNC +W+F
Sbjct: 70 KSSGSGKASGPLRPPPKTGDGKRDRIRQLLCDGLCLVPDDQRSGQDPGEVAA-EVEAAIYARFNQHTGPEYGAKVRSLSFNLKDPANPDLRARVLQGQVDPQELVDMPPEELASDSKRRENHKIRQEAAAEAVRGQTQQASTDMFKCGRCKQKKCTYYQMQTRSADEPMTTFVTCVNCGQKWKF 252
BLAST of Ggra5104.t1 vs. uniprot
Match: A0A067JGE8 (Transcription elongation factor n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JGE8_JATCU) HSP 1 Score: 161 bits (407), Expect = 1.440e-44 Identity = 83/170 (48.82%), Postives = 113/170 (66.47%), Query Frame = 0
Query: 61 DKMRDKVRNLLAGALFK-KDEHHVKSEDEANV-----IAYAIENAMFEKFEGSGQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
D +RDK+R LL AL K E DE N +A ++E+AMFEK S K KYRS+ FN+KDPKN LR VLL ++ P +LI M+ ++A+ ++ E+++K + +A+TD+FKCG+C++RKCTYYQMQTRSADEP+TT+VTCVNCNNRW+F
Sbjct: 178 DALRDKIRELLVEALSKVATEADEDIRDEVNACDPVRVAVSVESAMFEKLGRSNGTQKLKYRSIMFNIKDPKNPDLRRKVLLGEVDPRKLISMTPEEMASQQRQRENEEIKKKALHHSQIGGPSQATTDQFKCGRCQQRKCTYYQMQTRSADEPMTTYVTCVNCNNRWKF 347
BLAST of Ggra5104.t1 vs. uniprot
Match: A0A2P6TNC7 (Transcription elongation factor n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TNC7_CHLSO) HSP 1 Score: 160 bits (405), Expect = 1.850e-44 Identity = 86/169 (50.89%), Postives = 110/169 (65.09%), Query Frame = 0
Query: 59 TGDKMRDKVRNLLAGALFKKDEHHVKSEDEAN---VIAYAIENAMFEKFEGSGQAYKQKYRSLSFNLKDPKNGKLRSAVLLRDILPSELIDMSSTDLANDDLRKRRAEVREKMTRDAMPYTQQEASTDRFKCGKCKERKCTYYQMQTRSADEPLTTFVTCVNCNNRWRF 224
TGD +RDK R LA A H E A V A+EN ++ + G QAYK K+R L FNLKD N LR VL +I P L ++ +LA+D R+ A +REK DA P + ++A+TD+F+CGKCK+RKCTYYQMQTRSADEP+TTFV+C+NCNNRW+F
Sbjct: 166 TGDSIRDKCRQNLAQAF-----HQAVLEGVAGDPLVCGVAVENEIYNQNGGVSQAYKAKFRQLHFNLKDAANPDLRRKVLSGEIAPDVLHNLPPEELASDAKREENARIREKKLFDAAPSSAKQATTDQFQCGKCKQRKCTYYQMQTRSADEPMTTFVSCMNCNNRWKF 329 The following BLAST results are available for this feature:
BLAST of Ggra5104.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5104.t1 ID=Ggra5104.t1|Name=Ggra5104.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=225bpback to top |