Ggra5122.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5122.t1 vs. uniprot
Match: A0A2V3J739 (Small nuclear ribonucleoprotein E n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J739_9FLOR) HSP 1 Score: 166 bits (420), Expect = 7.430e-52 Identity = 80/87 (91.95%), Postives = 83/87 (95.40%), Query Frame = 0
Query: 1 MAPRSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMMTAATR 87
M+ RSKKIM QPINLIFRFLQNRT +EIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVE+HQKRDSRQKLGRILLKGDTITMMT ATR
Sbjct: 15 MSSRSKKIMVQPINLIFRFLQNRTLIEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEVHQKRDSRQKLGRILLKGDTITMMTTATR 101
BLAST of Ggra5122.t1 vs. uniprot
Match: R7QU35 (Small nuclear ribonucleoprotein E n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU35_CHOCR) HSP 1 Score: 142 bits (357), Expect = 1.980e-42 Identity = 69/87 (79.31%), Postives = 76/87 (87.36%), Query Frame = 0
Query: 1 MAPRSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMMTAATR 87
M R++KIMTQPI+LIFRFLQNRTRVEIWLYDN RIQGCIIGFDEYMNLVLD+AVE+ +K S KLGRILLKGDTITM+TAA R
Sbjct: 1 MGSRAQKIMTQPISLIFRFLQNRTRVEIWLYDNPQTRIQGCIIGFDEYMNLVLDEAVEVVEKNSSSTKLGRILLKGDTITMLTAAPR 87
BLAST of Ggra5122.t1 vs. uniprot
Match: A0A8J5XBH6 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XBH6_DIALT) HSP 1 Score: 127 bits (320), Expect = 8.700e-37 Identity = 60/84 (71.43%), Postives = 73/84 (86.90%), Query Frame = 0
Query: 1 MAPRSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMMTA 84
MA R +K+MTQPINLIFRFLQN+TR+++WLY+ TD+RI+G IIGFDEYMNLVLDDA EI K+ SR+ LGRILLKGD IT++ A
Sbjct: 1 MAGRVQKVMTQPINLIFRFLQNKTRIQVWLYEQTDLRIEGRIIGFDEYMNLVLDDAEEIALKKKSRKALGRILLKGDNITLLMA 84
BLAST of Ggra5122.t1 vs. uniprot
Match: A0A087SJG3 (Small nuclear ribonucleoprotein E n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SJG3_AUXPR) HSP 1 Score: 127 bits (319), Expect = 1.200e-36 Identity = 60/85 (70.59%), Postives = 73/85 (85.88%), Query Frame = 0
Query: 1 MAPRSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMMTAA 85
MAP+ K+IMTQPINLIFRFLQ+R +V+IWLYD+ D+RI+G IIGFDEYMNLVLD+ E+ KR +R+ LGRILLKGD IT+M AA
Sbjct: 1 MAPKVKRIMTQPINLIFRFLQSRQKVQIWLYDHNDLRIEGRIIGFDEYMNLVLDEGEEVSVKRQTRKPLGRILLKGDNITLMQAA 85
BLAST of Ggra5122.t1 vs. uniprot
Match: A0A7S0LPS2 (Small nuclear ribonucleoprotein E n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LPS2_9EUKA) HSP 1 Score: 128 bits (321), Expect = 1.210e-36 Identity = 59/82 (71.95%), Postives = 74/82 (90.24%), Query Frame = 0
Query: 1 MAPRSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMM 82
M+ + +KIMTQPINLIFRFLQN+TRV+IWL++NTD+RI+G I+GFDEYMNLVLDDA E+ K+ SR++LGRILLKGD IT+M
Sbjct: 23 MSTKVQKIMTQPINLIFRFLQNKTRVQIWLFENTDLRIEGRIVGFDEYMNLVLDDATELSIKKKSRKELGRILLKGDNITLM 104
BLAST of Ggra5122.t1 vs. uniprot
Match: R1EMN3 (Small nuclear ribonucleoprotein E n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EMN3_EMIHU) HSP 1 Score: 127 bits (318), Expect = 1.810e-36 Identity = 60/85 (70.59%), Postives = 74/85 (87.06%), Query Frame = 0
Query: 1 MAPRSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMMTAA 85
MA + +KIMTQPINLIFRFLQN+TRV+IWLY+NT++RI+G IIGFDEYMNLVLD+A E+ K+ R+ LGRILLKGD+IT+M A
Sbjct: 1 MATKVQKIMTQPINLIFRFLQNKTRVQIWLYENTELRIEGKIIGFDEYMNLVLDEAEELLMKKKERKPLGRILLKGDSITLMMTA 85
BLAST of Ggra5122.t1 vs. uniprot
Match: E1ZJG0 (Small nuclear ribonucleoprotein E n=3 Tax=Chlorella clade TaxID=2511126 RepID=E1ZJG0_CHLVA) HSP 1 Score: 126 bits (317), Expect = 2.420e-36 Identity = 59/85 (69.41%), Postives = 74/85 (87.06%), Query Frame = 0
Query: 1 MAPRSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMMTAA 85
M P+ K+IMTQPINLIFRFLQ+R +++IWLY++ D+RI+G IIGFDEYMNLVLD+A E+ KR +R+ LGRILLKGDTIT+M AA
Sbjct: 1 MPPKVKRIMTQPINLIFRFLQSRQKIQIWLYEHNDLRIEGRIIGFDEYMNLVLDEAEEVSVKRKTRKALGRILLKGDTITLMQAA 85
BLAST of Ggra5122.t1 vs. uniprot
Match: D8LD43 (Small nuclear ribonucleoprotein E n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD43_ECTSI) HSP 1 Score: 126 bits (317), Expect = 3.350e-36 Identity = 58/79 (73.42%), Postives = 71/79 (89.87%), Query Frame = 0
Query: 4 RSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMM 82
R KK+MTQPI+LIFRFLQNRTRV+IWLY+NT +RI+G I+GFDEYMNLVLD+A E+ K D R++LGRI+LKGDTIT+M
Sbjct: 14 RVKKVMTQPISLIFRFLQNRTRVQIWLYENTKMRIEGQILGFDEYMNLVLDEAEEVDMKNDERKQLGRIMLKGDTITLM 92
BLAST of Ggra5122.t1 vs. uniprot
Match: A0A6U0Y1E1 (Small nuclear ribonucleoprotein E n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0Y1E1_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.760e-36 Identity = 60/84 (71.43%), Postives = 72/84 (85.71%), Query Frame = 0
Query: 2 APRSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMMTAA 85
+ R KK+MTQPINLIFRFLQNRTR+ IWLY+N++ I+G I+GFDEYMNLVLDDA EI QK+++R LGRILLKGDTIT+M A
Sbjct: 10 STRVKKVMTQPINLIFRFLQNRTRILIWLYENSNTMIEGRIVGFDEYMNLVLDDAQEIDQKQETRTDLGRILLKGDTITLMQEA 93
BLAST of Ggra5122.t1 vs. uniprot
Match: A0A401Q587 (Small nuclear ribonucleoprotein E n=4 Tax=Gnathostomata TaxID=7776 RepID=A0A401Q587_SCYTO) HSP 1 Score: 125 bits (315), Expect = 5.830e-36 Identity = 54/84 (64.29%), Postives = 73/84 (86.90%), Query Frame = 0
Query: 2 APRSKKIMTQPINLIFRFLQNRTRVEIWLYDNTDIRIQGCIIGFDEYMNLVLDDAVEIHQKRDSRQKLGRILLKGDTITMMTAA 85
AP+ +K+M QPINLIFR+LQNR+R+++WL++ ++RI+GCIIGFDEYMNLVLDDA EIH K SR+ LGR++LKGD IT++ +A
Sbjct: 7 APKVQKVMVQPINLIFRYLQNRSRIQVWLHEQVNMRIEGCIIGFDEYMNLVLDDAEEIHMKSKSRKLLGRVMLKGDNITLLQSA 90 The following BLAST results are available for this feature:
BLAST of Ggra5122.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5122.t1 ID=Ggra5122.t1|Name=Ggra5122.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=88bpback to top |