Ggra5013.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5013.t1
Unique NameGgra5013.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Homology
BLAST of Ggra5013.t1 vs. uniprot
Match: A0A2V3J6Y1 (ACPS domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Y1_9FLOR)

HSP 1 Score: 213 bits (541), Expect = 1.470e-65
Identity = 121/238 (50.84%), Postives = 159/238 (66.81%), Query Frame = 0
Query:    4 VRNRIDVWKADLCDVRLRRMWAEVLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHLSGEAQLKFNVAHTGNSGILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQLRTQLLRAWTRKEAFVKCTGEGISRGLRSFAVDERSGLV---HDHKQRRAARQWRHRVTDVRVDDAHVAALCYALAP---RARDPHVRLLQW 235
            VR RIDVWK +LCD+ L+++ A VLSE+E+ RA++    AS  +F+  RA VRDVLARYL N  A E++F RG HGK  L    +L FNV+H+GN G++ V+   D+G+D+E + R + ++H L RRS  D E+RQ+ + G DE+ +RT  L+ WTRKEAFVKCTGEGI RGLRSF VD RSG V    D  Q +   +W   V DV VDD H+ ALCY+ +     A  PH+R LQW
Sbjct:   17 VRKRIDVWKTNLCDISLKQLSATVLSEDEERRASQAKYKASGERFRACRACVRDVLARYLHNVHAHEIEFRRGEHGKLLLRDNDELSFNVSHSGNMGLIAVTTGMDIGVDVETAGRTIGRMHALARRSFGDGEMRQLEAAGSDEK-MRT-FLQLWTRKEAFVKCTGEGIQRGLRSFEVDVRSGTVLVADDTAQPKC--EWT--VRDVSVDDRHIGALCYSYSTVHGSAVAPHLRHLQW 248          
BLAST of Ggra5013.t1 vs. uniprot
Match: A0A7S2ZRU6 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRU6_9RHOD)

HSP 1 Score: 99.0 bits (245), Expect = 2.590e-21
Identity = 72/204 (35.29%), Postives = 103/204 (50.49%), Query Frame = 0
Query:    6 NRIDVWKADLCDVRLRRMWAE---VLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHLSGEAQLKFNVAHTGNSGILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQLRTQL-LRAWTRKEAFVKCTGEGISRGLRSFAVD----ERSGLVHDHKQRRAARQWR 201
            N + VW   L   + +  W+E   VL   E+ R  K      + +F  +R F+R  + RY       +++F  G  GKP+L     LKFN++HT +   + V+ D  VG+D+E   R V  + +L  R L   E  ++ S     E  RT L LRAWTRKEAF+K TGEG+SR L++  V      +S LV     R+ A  WR
Sbjct:   20 NTVHVWTL-LLGRQKKAAWSELPGVLCASERERFAKFTRQEDQIRFAENRRFLRSTIGRYTGEEPV-DVRFGYGHKGKPYLVDHPWLKFNLSHTLDYAAIAVARDCHVGVDLESMRRKVSNLSRLAARKLTTSEWERIKSSA---ESTRTALFLRAWTRKEAFIKATGEGLSRDLKTVEVSLEDSSKSLLVSLDGSRKKADDWR 218          
BLAST of Ggra5013.t1 vs. uniprot
Match: A0A0S3U3Z3 (ACPS domain-containing protein n=1 Tax=Leptolyngbya sp. NIES-3755 TaxID=1752064 RepID=A0A0S3U3Z3_9CYAN)

HSP 1 Score: 98.2 bits (243), Expect = 3.910e-21
Identity = 69/183 (37.70%), Postives = 104/183 (56.83%), Query Frame = 0
Query:    6 NRIDVWKADLCDVRLRRMWA-----EVLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHLSGEAQLKFNVAHTGNSGILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQLRTQLL-RAWTRKEAFVKCTGEGISRGLRSFAVD 182
            N + VW+ +L  V     +      E+LS +EQ+RAN++     R +F   R F+R +LA+YL NT    LKF+ GAHGKP L  ++ ++FN+AH+ + G+  VS D+ +GIDIE   R V Q+  L+ R     E R +        Q + +L  + WT KEAF+K TG G+S+ L+   +D
Sbjct:   15 NDVHVWQVNLDAVASLHGYVPAVSIELLSTDEQSRANRLKFEHHRQRFIAGRGFLRSLLAKYL-NTDPTSLKFDYGAHGKPFLK-DSSMQFNLAHSEHLGLFAVSLDRAIGIDIEHI-RAVEQLEALVTRFFLPSEARTI--------QAQPELFFQYWTCKEAFLKATGTGLSK-LKELEID 185          
BLAST of Ggra5013.t1 vs. uniprot
Match: A0A7C0VWG1 (4'-phosphopantetheinyl transferase superfamily protein n=3 Tax=Bacteria TaxID=2 RepID=A0A7C0VWG1_9GAMM)

HSP 1 Score: 97.8 bits (242), Expect = 5.680e-21
Identity = 78/204 (38.24%), Postives = 106/204 (51.96%), Query Frame = 0
Query:   22 RMWAEVLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHLSGE-AQLKFNVAHTGNSGILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQLRTQLLRAWTRKEAFVKCTGEGISRGLR----SFAVDERSGLVHDHKQRRAARQWRHRVTDVRVDDAHVAALCYA 220
            R+W+ VLS +EQ RA ++     R+ F  +R  +R +L  YLR      L FE G  GKP L+   A L+FN++HT    +L  S  + +G+D+E  DR + Q+  L RR L  D +         E Q +  LL AWTRKEAF+K TGEG+  GLR    S A DE + L+ D     A   W      + V  +HV AL  A
Sbjct:   44 RLWS-VLSSDEQRRAGRLHREQGRSGFVIARGALRVLLGAYLRRAPD-ALGFEYGPRGKPMLAPRGAPLQFNLSHTRGLCVLAFSRRRALGVDVEALDRPL-QVGPLARRVL--DPVEHDALLRVPETQRKQALLNAWTRKEAFLKATGEGLGGGLREVPVSLAPDEPARLLGDASATGAWDLWA-----LEVGPSHVGALAAA 237          
BLAST of Ggra5013.t1 vs. uniprot
Match: W0RRH8 (4'-phosphopantetheinyl transferase n=1 Tax=Gemmatirosa kalamazoonesis TaxID=861299 RepID=W0RRH8_9BACT)

HSP 1 Score: 97.8 bits (242), Expect = 5.800e-21
Identity = 70/203 (34.48%), Postives = 110/203 (54.19%), Query Frame = 0
Query:   27 VLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHLSGEAQLKFNVAHTGNSGILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQLRTQLLRAWTRKEAFVKCTGEGISRGLRSFAVDERSG----LVHDHKQRRAARQWRHRVTDVRVDDAHVAALCYALAPRA 225
            +LS++E+AR ++    A R +F  +  ++R VLA YL + +   L F  G HGKP L  +A L+FN++H+G+  ++ V+    VG+D+ER DR V  + +L  R     E+  + +  +D+ ++       W+RKEA++K TG GI+RGLR F V    G    LV D     A  +W   +T +     + AAL  A   RA
Sbjct:   38 LLSDDERARMDRFHRPADRVRFGVAHGWLRRVLAAYL-DAAPSALAFGVGEHGKPFLR-DAALEFNLSHSGDLALVAVAAHGPVGVDVERWDRAVECL-ELAERFFSPAELGALHALREDDARVVEGFFATWSRKEAYLKATGHGITRGLRHFDVPFAPGGAAALVADRLDVEATGRWA--ITGLAAAPGYSAALVAAAPLRA 235          
BLAST of Ggra5013.t1 vs. uniprot
Match: 4'-phosphopantetheinyl transferase superfamily protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00031A22C2 (4'-phosphopantetheinyl transferase superfamily protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00031A22C2)

HSP 1 Score: 95.9 bits (237), Expect = 3.380e-20
Identity = 71/221 (32.13%), Postives = 115/221 (52.04%), Query Frame = 0
Query:   26 EVLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHLS------GEAQLKFNVAHTGNSGILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQLRTQLLRAWTRKEAFVKCTGEGISRGLRSFAV----DERSGLVHDHKQRRAARQWRHRVTDVRVDDAHVAALCYALAPRARDPHVRLLQWS 236
            E+LS++E+ +A +      R QF   R+ +R ++    +    R+L+FE GAHGKP LS         +++F+V+H+G  G++ ++ D  VG+DIE+ +  V+ + KL  R     E ++++      E+L     + WT KEA++K TG+G+S  L SF V    D    L+H   Q  AAR W   V  + V D H A++        R P+ R   W+
Sbjct:   38 ELLSDDERQKAARYRVDDPRRQFVACRSTLRRLIGEACQ-IPPRDLQFEYGAHGKPELSQVGWPENVPRIEFSVSHSGQLGLIALTIDSAVGVDIEQRNPRVKAL-KLADRFFAASESQELVK--LPAERLLDGFYKGWTCKEAYIKATGQGLSLSLSSFRVSMDPDHPVALIHVDGQPDAARHWT--VQSLAVGDGHSASIM------VRQPNCRFQCWA 246          
BLAST of Ggra5013.t1 vs. uniprot
Match: A0A1G0H9Y0 (ACPS domain-containing protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_41_15 TaxID=1798282 RepID=A0A1G0H9Y0_9GAMM)

HSP 1 Score: 95.1 bits (235), Expect = 5.010e-20
Identity = 60/198 (30.30%), Postives = 108/198 (54.55%), Query Frame = 0
Query:    8 IDVWKADLCDVRLRRMWA-EVLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHLSGEAQLKFNVAHTGNSGILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQLRTQLLRAWTRKEAFVKCTGEGISRGLRSFAV----DERSGLVHDHKQRRAARQW 200
            + VW  +L       + A ++L+  EQ +AN+      R ++  + AF+R +L+ YL   + +++ F  G +GKP+L+ +  ++FN++H+ +  ++ ++ DQ+VGIDIER       +  L  R    +E   +L+   ++  +     R WTRKEAF+K TG+G+S GL +F V    D+   L+      + AR+W
Sbjct:   15 LHVWDTELTATESELLLAYQLLAPAEQQKANRFVIAIIRQRYILATAFLRRILSHYL-ECAPQDVCFRWGVYGKPYLADDTNIQFNLSHSHDRALVVLTRDQEVGIDIERYVARHLDVLSLADRFFSREESCALLTLPAEDRLIA--FYRLWTRKEAFIKATGQGLSFGLNNFTVSFQRDDWDCLLSVEDSAKLARRW 209          
BLAST of Ggra5013.t1 vs. uniprot
Match: A0A4Y6PW84 (4'-phosphopantetheinyl transferase superfamily protein n=1 Tax=Persicimonas caeni TaxID=2292766 RepID=A0A4Y6PW84_9DELT)

HSP 1 Score: 94.7 bits (234), Expect = 6.320e-20
Identity = 69/218 (31.65%), Postives = 115/218 (52.75%), Query Frame = 0
Query:    6 NRIDVWKADLCD-VRLRRMWAEVLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHLSGEAQLKFNVAHTGNSGILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQLRTQLLRAWTRKEAFVKCTGEGISRGLRSFAV----DERSGLVHDHKQRRAARQWRHRVTDVRVDDAHVAALC 218
            N +DVW+  L     L    AE+L+++E ARA +      R  +  +R+ +R +L  YL  T   E+ F  G HGKP ++ +  ++FNV+H+G   +L    D+ VG+D+E+  R  + +  +        E   V++   D E+L  +  R WTRKEAF+K TG+G++ GL++F V    D R   V D +       W+  ++D+++   +  ALC
Sbjct:   14 NTVDVWRLSLEQPAPLVARAAELLTDDEAARAARFRFERDRISYTLTRSQLRRLLGAYLDKTPC-EIDFVNGNHGKPAVA-DTSVEFNVSHSGTYSLLAFCQDRPVGVDLEQI-RPRKSLALVAEHHFAPGECETVMAPDTDRERL-VRFYRCWTRKEAFMKATGQGLALGLKTFEVSVDDDPRLLWVEDGEPE----AWQ--LSDLQIAAGYAGALC 221          
BLAST of Ggra5013.t1 vs. uniprot
Match: A0A7D7ZZ15 (4'-phosphopantetheinyl transferase superfamily protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A7D7ZZ15_9FLAO)

HSP 1 Score: 94.7 bits (234), Expect = 6.990e-20
Identity = 64/203 (31.53%), Postives = 110/203 (54.19%), Query Frame = 0
Query:    5 RNRIDVWKA--DLCDVRLRRMWAEVLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHLSGEAQLKFNVAHTGNSGILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQLRTQ-LLRAWTRKEAFVKCTGEGISRGLRSFAV----DERSGLVHDHKQRRAARQW 200
            RN+I VWKA  D+ + +    W+  LS++E+ RAN       R  F T+R  +R+++ +YL N  A +++F    HGKP +  +A+L+FN++H+ N  +       ++G+DIE  D+ +    + M+ + H     ++ + G   +Q +       WTRKEAF+K  G G+S  L  FAV    ++++ LVH       A++W
Sbjct:   14 RNQIHVWKATLDVSENKHHVFWS-YLSDDEKQRANTFYFKKDRDYFITARGILRELIGQYL-NKKAIDIEFGYHTHGKPFMRNDAELEFNISHSKNMALYGFVKKDEIGVDIEFVDQKI----EAMQIARHFFSSYEITALGDLPQQHKASGFFNCWTRKEAFIKALGTGLSFPLDQFAVSLAPEKKATLVHTMWDTDEAQKW 210          
BLAST of Ggra5013.t1 vs. uniprot
Match: A0A7V9TZU1 (4'-phosphopantetheinyl transferase superfamily protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7V9TZU1_9BACT)

HSP 1 Score: 94.7 bits (234), Expect = 1.390e-19
Identity = 69/203 (33.99%), Postives = 106/203 (52.22%), Query Frame = 0
Query:    8 IDVWKADLCDVRLRRMWAEVLSEEEQARANKMANIASRAQFQTSRAFVRDVLARYLRNTSARELKFERGAHGKPHL--SGEAQLKFNVAHTGNSGILCVSHDQDVGIDIE--RSDRHVRQI-HKLMRRSLHDDEIRQVLSHGKDEEQLRTQ-LLRAWTRKEAFVKCTGEGISRGLRSFAVDERSG----LVHDHKQRRAARQW 200
            + +W+A L D R   ++   LS +E ARAN+   I  R  F  +R  VR++LA YL   +  EL+F  GA GKP L   G+ Q+ FN++H         S  +D+G+D+E  + D  V  I ++   R+       +VL+      +LR Q     WTRKEA++K  GEG+S  L  F V  R G    L++++++ R   +W
Sbjct:   29 VHLWQAPL-DGRPADIFESFLSADELARANRFHFIKDRTHFVVARGLVRNLLAAYL-GINCSELRFSYGAKGKPFLLLDGQTQINFNLSHANGRAAFAFSRGRDLGVDLEYVKEDFDVELIANRFFSRA-------EVLALRTVPAELRKQAFFNCWTRKEAYIKARGEGLSMPLDQFDVSLRPGEPAALLNNYREERELTRW 222          
The following BLAST results are available for this feature:
BLAST of Ggra5013.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6Y11.470e-6550.84ACPS domain-containing protein n=1 Tax=Gracilariop... [more]
A0A7S2ZRU62.590e-2135.29Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A0S3U3Z33.910e-2137.70ACPS domain-containing protein n=1 Tax=Leptolyngby... [more]
A0A7C0VWG15.680e-2138.244'-phosphopantetheinyl transferase superfamily pro... [more]
W0RRH85.800e-2134.484'-phosphopantetheinyl transferase n=1 Tax=Gemmati... [more]
4'-phosphopantetheinyl transferase superfamily protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00031A22C23.380e-2032.134'-phosphopantetheinyl transferase superfamily pro... [more]
A0A1G0H9Y05.010e-2030.30ACPS domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A4Y6PW846.320e-2031.654'-phosphopantetheinyl transferase superfamily pro... [more]
A0A7D7ZZ156.990e-2031.534'-phosphopantetheinyl transferase superfamily pro... [more]
A0A7V9TZU11.390e-1933.994'-phosphopantetheinyl transferase superfamily pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0371434'-phosphopantetheinyl transferase domain superfamilyGENE3D3.90.470.20coord: 24..220
e-value: 9.6E-38
score: 131.4
IPR0371434'-phosphopantetheinyl transferase domain superfamilyGENE3D3.90.470.20coord: 110..219
e-value: 9.6E-38
score: 131.4
IPR0371434'-phosphopantetheinyl transferase domain superfamilySUPERFAMILY562144'-phosphopantetheinyl transferasecoord: 109..219
IPR0371434'-phosphopantetheinyl transferase domain superfamilySUPERFAMILY562144'-phosphopantetheinyl transferasecoord: 20..101
IPR0082784'-phosphopantetheinyl transferase domainPFAMPF01648ACPScoord: 110..218
e-value: 3.6E-15
score: 56.1
NoneNo IPR availablePANTHERPTHR12215PHOSPHOPANTETHEINE TRANSFERASEcoord: 24..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000069_piloncontigtig00000069_pilon:49301..50109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5013.t1Ggra5013.t1Gracilaria gracilis GNS1m malemRNAtig00000069_pilon 49301..50109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5013.t1 ID=Ggra5013.t1|Name=Ggra5013.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MRSVRNRIDVWKADLCDVRLRRMWAEVLSEEEQARANKMANIASRAQFQT
SRAFVRDVLARYLRNTSARELKFERGAHGKPHLSGEAQLKFNVAHTGNSG
ILCVSHDQDVGIDIERSDRHVRQIHKLMRRSLHDDEIRQVLSHGKDEEQL
RTQLLRAWTRKEAFVKCTGEGISRGLRSFAVDERSGLVHDHKQRRAARQW
RHRVTDVRVDDAHVAALCYALAPRARDPHVRLLQWSRRAVNRNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0371434-PPantetheinyl_Trfase_dom_sf
IPR0082784-PPantetheinyl_Trfase_dom