Ggra5934.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra5934.t1 vs. uniprot
Match: A0A2V3J385 (DNA-directed RNA polymerase subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J385_9FLOR) HSP 1 Score: 153 bits (386), Expect = 5.450e-46 Identity = 72/96 (75.00%), Postives = 84/96 (87.50%), Query Frame = 0
Query: 1 MENVLFCAFCGSFREIFDSGDKKVKCKLCNKEVNLSDLTSQLQASVEVLPIERSELLLQLYGQTAEKRKADDAVIDEDCPKCGHPKLSFTTAQLRG 96
MENVLFC+FCG+FREI DSG ++VKC C+ +LS++TSQL+ SVEVL +ERSELLLQLYGQT+EK KADDA ID+DCPKCGH KLSFTTAQLRG
Sbjct: 1 MENVLFCSFCGAFREIIDSGQQQVKCTQCDTRTDLSEITSQLKKSVEVLQMERSELLLQLYGQTSEKVKADDATIDDDCPKCGHSKLSFTTAQLRG 96
BLAST of Ggra5934.t1 vs. uniprot
Match: D8M1K7 (DNA-directed RNA polymerase subunit n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M1K7_BLAHO) HSP 1 Score: 55.1 bits (131), Expect = 2.270e-7 Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = 0
Query: 1 MENVLFCAFCGSFREIFDSGDKKVKCKLCNKEVNLSDLTSQ-LQASVEVLPIER--SELLLQLYGQTAEKRKADDAVIDEDCPKCGHPKLSFTTAQLR 95
+ NV FC CGS ++ +SG ++C +C+ + +SDL++ + S P+ + EL Q Q R A++DE+CP+C +P++SF T QLR
Sbjct: 15 VNNVEFCKVCGSILDLPESGT--IECGICHWKCQMSDLSNTTIITSSHPKPVPQWVHELQQQEKIQVGPTR----ALVDEECPRCKNPQMSFYTLQLR 106
BLAST of Ggra5934.t1 vs. uniprot
Match: A0A7S1X9J3 (DNA-directed RNA polymerase I subunit RPA12 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1X9J3_9RHOD) HSP 1 Score: 53.5 bits (127), Expect = 1.170e-6 Identity = 34/96 (35.42%), Postives = 42/96 (43.75%), Query Frame = 0
Query: 6 FCAFCGSFREIFDSGDKKVKCKLCN----KEVNLSDLTSQLQASVEVLPIERSELLLQLYGQTAEKRKADDAVIDEDCPKCGHPKLSFTTAQLRGS 97
FC CG + C C +E SD P E SELL L + E AD A IDE CP+CG+PK+ FTT Q+R +
Sbjct: 28 FCRECGMLWADGAEAGTRATCSECGAVEEREPGRSDFV--------FYPQEPSELLHSLREKFVESSGADHAEIDEPCPRCGNPKMRFTTVQMRSA 115
BLAST of Ggra5934.t1 vs. uniprot
Match: A0A7S1X931 (DNA-directed RNA polymerase I subunit RPA12 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1X931_9RHOD) HSP 1 Score: 52.8 bits (125), Expect = 1.950e-6 Identity = 25/48 (52.08%), Postives = 31/48 (64.58%), Query Frame = 0
Query: 50 PIERSELLLQLYGQTAEKRKADDAVIDEDCPKCGHPKLSFTTAQLRGS 97
P E SELL L + E AD A IDE CP+CG+PK+ FTT Q+R +
Sbjct: 59 PQEPSELLHSLREKFVESSGADHAEIDEPCPRCGNPKMRFTTVQMRSA 106
BLAST of Ggra5934.t1 vs. uniprot
Match: DNA-directed RNA polymerase I subunit RPA12 n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007113146 (DNA-directed RNA polymerase I subunit RPA12 n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007113146) HSP 1 Score: 52.4 bits (124), Expect = 2.070e-6 Identity = 33/102 (32.35%), Postives = 53/102 (51.96%), Query Frame = 0
Query: 1 MENVLFCAFCGSFREIFDSGDKKVKCKLCNKEVNLSDLTSQLQASVEVLPIERSELLLQLYGQTAEKRKADD-------AVIDEDCPKCGHPKLSFTTAQLR 95
+ NV FC CGS +I +SG+ ++C +C+ +LS +L L LY E ++ +D A++DE+CP+C +P++SF T QLR
Sbjct: 15 VNNVEFCRVCGSILDIPESGN--IECGICHWTCHLS-----------------VDLNLFLYHWLRELQQKEDVQTGPTRAMVDEECPRCKNPQMSFYTLQLR 97 The following BLAST results are available for this feature:
BLAST of Ggra5934.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra5934.t1 ID=Ggra5934.t1|Name=Ggra5934.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=112bpback to top |