Ggra5906.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5906.t1
Unique NameGgra5906.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length225
Homology
The following BLAST results are available for this feature:
BLAST of Ggra5906.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..152
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 196..219
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 194..224
score: 10.387709

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:482007..482681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5906.t1Ggra5906.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 482007..482681 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5906.t1 ID=Ggra5906.t1|Name=Ggra5906.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=225bp
MQPPPSSQVYAARVSVPLRSSVQAAAAPAGASYLYQPPPPRPSALEWAHV
RLSPLSLHTSAGALSPSPSPSPSRTPTRTRTPSPSPHALPAIDTLLMDAY
AGADGAPKEEEQQQQGVPPPQRAASPQRADLPQRADWSQRCSSSSSSAAQ
RAGGMSLRDDYWNTVLGADVSVHVGARAEGGANNKVLKYPSLRYPCKVWG
CTQMFKHRSSRSRHQKKLHPGSAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type