Ggra5946.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5946.t1
Unique NameGgra5946.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length535
Homology
BLAST of Ggra5946.t1 vs. uniprot
Match: A0A2V3J400 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J400_9FLOR)

HSP 1 Score: 450 bits (1158), Expect = 4.260e-151
Identity = 261/505 (51.68%), Postives = 327/505 (64.75%), Query Frame = 0
Query:   13 LLSALPRGAAHAVALRERHGGDLVLAATLLRAARRAGARAPLLLAAPQAAAHL-RAAYPFASARVVQVFPEQHAPLRAFAAAALAARVQHVLLGCAGVHAAVAAVSRFAPALHALPPDVGAVSGVEMLPDGVLSFHAPLMRVEHAAFAAALSELVPPXXXXXXXXXXXXXXXALFMQPSLLPAALRLAERRRRALRALSAQSDALLRDCVLQSSHWGYVLARTAPLFHAYNAGRASRLAARHAVLRLCVHVSGAAAPPELDDAQLTRLCHHLFTPASCGAMRALPKGRTAAGVVLRPATGRFAARAXXXXXXXXXXXXXXXXXXXXXXXXXXXQLIMLTREPDHENAPLLSTRLRGNAACAPLLEQRAVYWDNRFVLCAAPLSGLQHAHVPQLAPQRVFEAALQPARPQQHAQQLTECSLYVRQLRRADWQTISSVSARARRFHIPYECIRALPAVFQKMPASTAVGQLVASPHLALSARPDLYFVAVRLPRFRCLPHDLEPGFT 516
            LL  LP+ A +AV LR+    D+ LA  LL          PLL A PQ  AHL RAA P   + +  + P+  APLR +AAAA+  +V H+ +G   +  AV AV+     + A P    A +G+EMLP G L+FH PL  V+HA   + + E VPP                 FM P L+PAAL+LA++++ +L+ L  QSD LLR+ VL++SHWGY++ART  L+  +N+GRASRLA  HA+ R+C+HVSG+A P  LD+ Q+ RLC  +F P++ G MRALPKGRTAAGVVLRPATGRFA R                             L+MLTREPDH+   L STRLRGN ACAPL EQ+ VYWDNRFV+ AAP+S L     PQL+ QRVFEAAL+P    QH QQ+ +C+LY+RQLRR+DW  ++SVS R R+FH P+ECIRALP VFQK   S A G LVASPHL LSARPDLYF+AVRLPRFRCLP D++PGFT
Sbjct:   15 LLKTLPQSARYAVVLRDGRACDVALANLLLH---HRSDNKPLLFA-PQREAHLLRAANPSCQSLIHTITPDNRAPLRPYAAAAIHHQVSHLAVGTTRLERAVTAVTS----ISANPICGDASTGIEMLPKGTLTFHEPLSTVDHATICSTVHENVPPEYNRTADPT--------FMPPQLIPAALQLADQKKSSLQLLQHQSDDLLRNSVLETSHWGYIVARTDMLYEKFNSGRASRLAVIHAMQRMCLHVSGSAKPLSLDEPQVNRLCEAVFKPSADGDMRALPKGRTAAGVVLRPATGRFARRLRTGND----------------------HLMMLTREPDHDTPSLFSTRLRGNYACAPLHEQQPVYWDNRFVMHAAPISTLD-TEAPQLSAQRVFEAALRPM--SQHKQQMADCTLYIRQLRRSDWDLMTSVSNRVRQFHTPFECIRALPVVFQKKAGSRATGDLVASPHLGLSARPDLYFMAVRLPRFRCLPDDIDPGFT 478          
BLAST of Ggra5946.t1 vs. uniprot
Match: A0A2V3ID12 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID12_9FLOR)

HSP 1 Score: 172 bits (436), Expect = 8.490e-47
Identity = 100/238 (42.02%), Postives = 142/238 (59.66%), Query Frame = 0
Query:   79 VFPEQHAPLRAFAAAALAARVQHVLLGCAGVHAAVAAVSRFAPALHALPPDVGAVSGVEMLPDGVLSFHAPLMRVEHAAFAAALSELVPPXXXXXXXXXXXXXXXALFMQPSLLPAALRLAERRRRALRALSAQSDALLRDCVLQSSHWGYVLARTAPLFHAYNAGRASRLAARHAVLRLCVHVSGAAAPPELDDAQLTRLCHHLFTPASCGAMRALPKGRTAAGVVLRPATGRFAAR 316
            + P+  APLR +AA A+  +V H+ +G   +   V AV+     + A P    A +G+EMLP G L+FH PL  V+HA   + + E V P                 FM P L+ AAL+LA++++ +L+ L  QSD LLR+ VL++SHW Y++A T  L+  +N G A RLA  HA  R+C+HVSG+A     D+ Q+ R+C  +F P+    ++ LP+GRTAAGVVLRPATGRF  R
Sbjct:    2 ITPDNRAPLRPYAATAIHHQVSHLAIGTTRLERGVTAVTS----ISANPICGDASTGIEMLPKGTLTFHEPLSTVDHATICSTVQENVIPEYNRTADPT--------FMPPQLIQAALQLADQKKSSLQLLQHQSDDLLRNSVLETSHWSYIVAPTDMLYETFNFGGAPRLAVIHAAQRMCLHVSGSAKSLSRDEPQVNRVCETVFKPSVDNNIQDLPEGRTAAGVVLRPATGRFGRR 227          
BLAST of Ggra5946.t1 vs. uniprot
Match: A0A2V3IBZ6 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBZ6_9FLOR)

HSP 1 Score: 155 bits (392), Expect = 3.670e-41
Identity = 82/179 (45.81%), Postives = 114/179 (63.69%), Query Frame = 0
Query:  138 MLPDGVLSFHAPLMRVEHAAFAAALSELVPPXXXXXXXXXXXXXXXALFMQPSLLPAALRLAERRRRALRALSAQSDALLRDCVLQSSHWGYVLARTAPLFHAYNAGRASRLAARHAVLRLCVHVSGAAAPPELDDAQLTRLCHHLFTPASCGAMRALPKGRTAAGVVLRPATGRFAAR 316
            MLP G L+FH PL  V+HA   + + E VPP                 FM P L+ AAL+LA++++ +L+ L  QSD LLR+ VL++SHW Y++A T  L+  +N+G A RLA  HA  R+C+HVSG+A     D+ Q+ R+C  +F P++   ++ LP+GRTAAGVVLRPATGRF  R
Sbjct:    1 MLPKGTLTFHEPLSTVDHATICSTVQENVPPEYNRTADPT--------FMPPQLIQAALQLADQKKFSLQLLQHQSDDLLRNSVLETSHWSYIVAPTDMLYETFNSGGAPRLAVIHAAQRMCLHVSGSAKSLSRDEPQVNRVCETVFKPSADNNIQDLPEGRTAAGVVLRPATGRFGRR 171          
BLAST of Ggra5946.t1 vs. uniprot
Match: A0A2V3IC46 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC46_9FLOR)

HSP 1 Score: 141 bits (355), Expect = 7.670e-36
Identity = 80/180 (44.44%), Postives = 109/180 (60.56%), Query Frame = 0
Query:  138 MLPDGVLSFHAPLMRVEHAAFAAALSELVPPXXXXXXXXXXXXXXXALFMQPSLLPAALRLAERRRRALRAL-SAQSDALLRDCVLQSSHWGYVLARTAPLFHAYNAGRASRLAARHAVLRLCVHVSGAAAPPELDDAQLTRLCHHLFTPASCGAMRALPKGRTAAGVVLRPATGRFAAR 316
            MLP G L+FH PL  +    FA    + VPP                 FM P L+ AAL+LA +++ +L    + QSD LLR+ VL+SSHW Y++A T  L+  +N+G A RLA  HA  R+C+HVSG+A     D+ Q+ R+C  +F P++   ++ LP+GRTAAGVVLRPATGRF  R
Sbjct:    1 MLPKGTLTFHEPLSTLITPQFAQPYKKNVPPEYNRTADPT--------FMPPQLIQAALQLANQKKFSLHIYCNTQSDDLLRNSVLESSHWSYIVAPTDMLYETFNSGGAPRLAVIHAAQRMCLHVSGSAKSLSRDEPQVNRVCETVFKPSADNNIQDLPEGRTAAGVVLRPATGRFGRR 172          
BLAST of Ggra5946.t1 vs. uniprot
Match: A0A2V3IEQ1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEQ1_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 1.120e-27
Identity = 84/220 (38.18%), Postives = 120/220 (54.55%), Query Frame = 0
Query:   13 LLSALPRGAAHAVALRERHGGDLVLAATLLRAARRAGARAPLLLAAPQAAAHLRAAYPFASARVVQVFPEQHAPLRAFAAAALAARVQHVLLGCAGVHAAVAAVSRFAPALHALPPDVGAVSGVEMLPDGVLSFHAPLMRVEHAAFAAALSELVPPXXXXXXXXXXXXXXXALFMQPSLLPAALRLAERRRRALRALSAQSDALLRDCVLQSSHWGYVLA 232
            LL  LP+ A +AV LR+    D+ LA  L           PLL    + A  LRAA P   + +  + P+  APLR +AAAA+  +V H+ +G   +  AV AV+     + A P    A +G+EMLP G L+FH PL  V+HA   + + E VPP                 FM P L+P AL+LA++++ +L+ L  QSD LLR+ VL++SHWGY++A
Sbjct:   15 LLKTLPQSARYAVVLRDGRACDVALANLLPH---HRSDNKPLLFVPEREAHLLRAANPSCQSLIYTITPDNQAPLRPYAAAAIHHQVSHLAVGTNRLERAVTAVTS----ISANPICGDASTGIEMLPKGTLTFHVPLSTVDHAKICSTVHEKVPPKYNRTADPT--------FMPPQLIPDALQLADQKKSSLQLLQHQSDDLLRNSVLETSHWGYIVA 219          
The following BLAST results are available for this feature:
BLAST of Ggra5946.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J4004.260e-15151.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID128.490e-4742.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IBZ63.670e-4145.81Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
A0A2V3IC467.670e-3644.44Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEQ11.120e-2738.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:686438..688042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5946.t1Ggra5946.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 686438..688042 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5946.t1 ID=Ggra5946.t1|Name=Ggra5946.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=535bp
MAARAPLLRAHALLSALPRGAAHAVALRERHGGDLVLAATLLRAARRAGA
RAPLLLAAPQAAAHLRAAYPFASARVVQVFPEQHAPLRAFAAAALAARVQ
HVLLGCAGVHAAVAAVSRFAPALHALPPDVGAVSGVEMLPDGVLSFHAPL
MRVEHAAFAAALSELVPPHYGGGGDGGDDDQHHALFMQPSLLPAALRLAE
RRRRALRALSAQSDALLRDCVLQSSHWGYVLARTAPLFHAYNAGRASRLA
ARHAVLRLCVHVSGAAAPPELDDAQLTRLCHHLFTPASCGAMRALPKGRT
AAGVVLRPATGRFAARAAAAAAASAAASSSSSSSSSAAPPAAQEQLIMLT
REPDHENAPLLSTRLRGNAACAPLLEQRAVYWDNRFVLCAAPLSGLQHAH
VPQLAPQRVFEAALQPARPQQHAQQLTECSLYVRQLRRADWQTISSVSAR
ARRFHIPYECIRALPAVFQKMPASTAVGQLVASPHLALSARPDLYFVAVR
LPRFRCLPHDLEPGFTPEHYRKWIADTAVAAAGA*
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