Ggra6747.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6747.t1
Unique NameGgra6747.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length243
Homology
BLAST of Ggra6747.t1 vs. uniprot
Match: A0A2V3IXD9 (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXD9_9FLOR)

HSP 1 Score: 311 bits (798), Expect = 1.290e-104
Identity = 165/248 (66.53%), Postives = 203/248 (81.85%), Query Frame = 0
Query:    1 MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSSTSGGRVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAARPKNHIKFVQDVNGDEQVINVESRKR------GQDKSTSSKADKLVAKEQGKAYRYLKRRAERQEKLDTVLTDMQTAKNLMSKGRRFVVRRANPETGAPPVFKWRRERRR 242
            MSSFSKN+LPRREHRERAQPA RI KHGLLEKKKDYKLRAKDHNRKRLRVK+LREKAAFRNPDEFY+GMINS T GGR++RVLN KEKDAIPI NRDREQR+LAETQDS+YVQLKS+ ERASL++++ RLHFT+ AA+  + HIKF  + + +E  + V+  +        ++    SK  + VAK+Q KAY+++ ++ ER +KLDTVL DMQT+KNL+SKGRRFVVR ++  TGAP V++W+RERRR
Sbjct:    1 MSSFSKNVLPRREHRERAQPASRISKHGLLEKKKDYKLRAKDHNRKRLRVKLLREKAAFRNPDEFYFGMINSVTDGGRIRRVLNTKEKDAIPIPNRDREQRLLAETQDSRYVQLKSNTERASLQKLKQRLHFTAQAASTSRTHIKFEDNDDDEEYPVPVKHDQEPAVAHGSRENPKHSKLQRFVAKQQAKAYKHIAQKNERLQKLDTVLADMQTSKNLLSKGRRFVVRPSDANTGAPAVYRWQRERRR 248          
BLAST of Ggra6747.t1 vs. uniprot
Match: R7QSI4 (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSI4_CHOCR)

HSP 1 Score: 225 bits (573), Expect = 1.490e-70
Identity = 127/245 (51.84%), Postives = 171/245 (69.80%), Query Frame = 0
Query:    1 MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSSTSGGRVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAARPKNHIKFVQDVNGDEQVINVE---SRKRGQDKSTSSKADKLVAKEQGKAYRYLKRRAERQEKLDTVLTDMQTAKNLMSKGRRFVVRRANPETGAPPVFKWRRERRR 242
            MSSF KNI+PRR H+ERAQP+ RI KHGLLEKKKDYK RA+D N K+ R+KIL+EKAAFRNPDEFYYGMI S T  GRV++ +N KEK+A+PI +R+   R+LAE +DS YV +K + E   + R++  LH  +AA+  P+ H+ FV D   +E++  +E   S ++G     S    +   +   KAY+ L++R ER  KL TVL DM + K L+SKGRR + RRAN  TGAP V++W++ER+R
Sbjct:    1 MSSFGKNIIPRRAHKERAQPSSRISKHGLLEKKKDYKQRARDRNLKQRRLKILKEKAAFRNPDEFYYGMIRSGTDAGRVRKGVNDKEKEAVPIEHREAGMRLLAERRDSGYVGMKCAMEGRRVDRLKKSLHGVAAASGVPRTHVMFVDD---EEEMAGLEKELSERKGTGSLHSGGGHRATLRSTKKAYKELQQRQERHGKLRTVLKDMASEKALLSKGRRVLERRANSTTGAPAVYRWQQERKR 242          
BLAST of Ggra6747.t1 vs. uniprot
Match: A0A5J4Z8K8 (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8K8_PORPP)

HSP 1 Score: 147 bits (371), Expect = 4.520e-40
Identity = 107/256 (41.80%), Postives = 150/256 (58.59%), Query Frame = 0
Query:    1 MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSSTSGGRVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAA--AARPKNHIKFVQDVNGDEQVI------------NVESRKRGQDKSTSSKADKLVAKEQGKAYRYLKRRAERQEKLDTVLTDMQTAKNLMSKGRRFVVRRANPETGAPPVFKWRRERRR 242
            MSS+ K + PRR H+ERAQP  R Q+ GLLEKKKDYKLRA+D ++K   +K LREKAA RNPDEFY+GMI++ T   R + V      DAIP   R +E+  L    D+ YV +K S E A + R++ ++HFT+ A  +  P+  I FV D +    +              ++++ R   K      +     EQ K Y+ L  R ER+EKL  +L  M+T +NLMSKG+R  V+  +  TG P V+KWR++R+R
Sbjct:    1 MSSWKK-VEPRRMHKERAQPERR-QRLGLLEKKKDYKLRARDFHKKEDELKRLREKAALRNPDEFYHGMISAGTRTARRRDVA-----DAIPA--RTQEEHALVLHHDANYVSMKRSVEAAKIDRLKSQMHFTALAQVSGGPRRTI-FVSDDDERSDIAAGASHDAKRLPGELQTKDRSPAKPVDPAFEAQRLSEQTKVYKELAGRVEREEKLHRLLLTMETERNLMSKGKRQRVKDRDEYTGEPAVYKWRQKRKR 246          
BLAST of Ggra6747.t1 vs. uniprot
Match: probable U3 small nucleolar RNA-associated protein 11 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4B67 (probable U3 small nucleolar RNA-associated protein 11 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4B67)

HSP 1 Score: 142 bits (357), Expect = 2.390e-37
Identity = 84/158 (53.16%), Postives = 108/158 (68.35%), Query Frame = 0
Query:    1 MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSS-TSGGRVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAA-RPKNHIKFVQDVNGDEQV 156
            MSSFSKNI+PRREHRER QP  R+ KHGLLEKK+DYKLRAKD NRK  R+K+LREKAAFRNPDEFY+ M +++ T  GRV++  +    +    A  D   R L ETQD  YVQ+K + ER+ +  +++ LHF  AAA    + H  FV D + ++ V
Sbjct:    1 MSSFSKNIIPRREHRERHQPDQRVAKHGLLEKKRDYKLRAKDANRKAYRLKLLREKAAFRNPDEFYHAMEHAAPTKNGRVRKARDPNVAENHHTA--DGAVRRLVETQDRAYVQMKRTRERSRIESIKESLHFLDAAAVDESRKHTVFVGDDDDNDNV 156          
BLAST of Ggra6747.t1 vs. uniprot
Match: A0A176WM09 (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176WM09_MARPO)

HSP 1 Score: 133 bits (335), Expect = 5.770e-35
Identity = 100/241 (41.49%), Postives = 137/241 (56.85%), Query Frame = 0
Query:    1 MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSSTSGGRVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAARPKNHIKFVQDVNGDEQVINVESRKRGQDKSTSSKADKLVAKEQGKAYRYLKRRAERQEKLDTVLTDMQTAKNLMSKGRRFVVRRANPETGAPPVFKWRRERR 241
            MSS  +N + R+ H+ER+QP+ R  K+GLLEK KDY LRAKD ++K   +KIL+EKA+FRNPDEFYY MINS T  G  +     KE          +E+ ML +TQD +YV  K+ AE   + R++  LH T+  A+    H+ F +D         VE      +K T     K + K+Q  AYR L+ R ER EKL ++   M   K +M KGR+  +     E  + PVFKWR+ER+
Sbjct:    1 MSSL-RNAVKRKTHKERSQPSTRS-KYGLLEKHKDYVLRAKDFHKKETEIKILKEKASFRNPDEFYYKMINSQTVNGVHRDKKGGKEYT--------QEEIMLMKTQDFRYVLNKAQAESKKVERLQSVLHQTAQPAS--NTHVYFAED-----SAEAVELAPGAVEKRTKL-PPKRIRKKQESAYRELEERKERAEKLKSLTLTMTMQKQIMGKGRKRKLD-GGQEGVSEPVFKWRQERK 222          
BLAST of Ggra6747.t1 vs. uniprot
Match: B8LM47 (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Picea sitchensis TaxID=3332 RepID=B8LM47_PICSI)

HSP 1 Score: 126 bits (316), Expect = 4.670e-32
Identity = 97/249 (38.96%), Postives = 142/249 (57.03%), Query Frame = 0
Query:    1 MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSSTSGGRVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAARPKN-HIKFVQD---VNGDEQVINVESRKRGQDKSTSSKADKLVAKEQGKAYRYLKRRAERQEKLDTVLTDMQTAKNLMSKGRRFVVRR---ANPETGAPPVFKWRRERRR 242
            MSS  +N + RR H+ERAQPA R  K GLLEK KDY LRA+D+++K+  ++ LREKAA RNPDEFY+ MIN+ T  G  +    AK+  +        E+ +L +TQD +YV  K+ +E+    R++  LH       RP N H  F +D       EQVI     K        +K  K + ++   AY+ L+ R +R +++  ++T+M   K LM KGR+  +R     +P +G  PV+KWR+ER+R
Sbjct:    1 MSSL-RNAVKRRTHKERAQPAARS-KFGLLEKHKDYVLRARDYHKKQENIQRLREKAASRNPDEFYFKMINTRTVDGVHRPQSGAKQYSS--------EELLLMKTQDIQYVLQKAQSEKKKAERLQSALH---CIGCRPSNRHTYFAEDREEAKELEQVILSSEEKA----IFPAKLPKRIKRKMAGAYKELEERKKRADEMQNIVTEMSLRKELMGKGRKRKLRDDEIVHPTSG--PVYKWRKERKR 230          
BLAST of Ggra6747.t1 vs. uniprot
Match: probable U3 small nucleolar RNA-associated protein 11 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D98D9F (probable U3 small nucleolar RNA-associated protein 11 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D98D9F)

HSP 1 Score: 120 bits (300), Expect = 1.280e-29
Identity = 91/248 (36.69%), Postives = 139/248 (56.05%), Query Frame = 0
Query:    1 MSSFSKNILP-RREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSSTSGGRVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAARPKNHIKFVQDVNGDEQVINVESRKRGQDKSTSSKADK----LVAKEQGKAYRYLKRRAERQEKLDTVLTDMQTAKNLMSKGRRFVVRRANPET-GAPPVFKWRRERRR 242
            MSSF K     ++ HRER+QPA R    GLLEKKKDYKLRAKD++ K  +++ LR KA  RNPDEFY+ M++S    G  KR+   K++D +       EQ+ + +TQD +YV  K + E   + ++R  LH       +PKN   F  +   + +  +V +  R     TS+  D+    ++A E+ K YR L +R +RQ++L  +   M + K    K R+ +++   PET  +P V+K+  ER+R
Sbjct:    1 MSSFRKAAKSAQKTHRERSQPASRNNL-GLLEKKKDYKLRAKDYHAKEDKLRKLRRKALNRNPDEFYFKMVSSRLEDGVHKRL---KKEDPVT-----EEQQKMMDTQDKRYVNYKLAVETKKIEKLRSTLHLVDEVQEKPKNKHTFFVNTKEEVESFDVAAHLRTLQSDTSTPLDENSELILAMEKTKKYRELSQRKDRQKQLKIIADKMDSRKIKKDKRRKVLIQ---PETKSSPAVYKFYPERKR 236          
BLAST of Ggra6747.t1 vs. uniprot
Match: A0A2Z7A9A5 (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7A9A5_9LAMI)

HSP 1 Score: 118 bits (296), Expect = 4.210e-29
Identity = 91/247 (36.84%), Postives = 139/247 (56.28%), Query Frame = 0
Query:    1 MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSSTSGGRVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAARPKNHIKFVQDVNGDEQVINVESRKRGQDKSTSSKAD--KLVAKEQGKAYRYLKRRAERQEKLDTVLTDMQTAKNLMSKGRRFVVRRANPETGAP---PVFKWRRERRR 242
            MSS  +N +PRR H+ERAQP  R +K GLLEK KDY  RA+ +++K   ++ L+EKAAFRNPDEFY+GMI + T GG     ++  E  A    N   E+ ML +TQD  Y+  K   E+  + R+   LH     ++    H+ + ++     +VI    +K  ++   S+  D  K++ +++  +YR L+ R  R + L+ +  DM   K L  KGR+  +R    E  +P   PV+KWR+ER+R
Sbjct:    1 MSSL-RNAVPRRAHKERAQPQSR-RKFGLLEKHKDYVTRARAYHQKEQTLQKLKEKAAFRNPDEFYFGMIKTKTVGG-----VHKPESQANKYTN---EELMLMKTQDIGYILQKLQTEKKKIERLNSTLHSLDNQSS--SKHVYYAENREEAREVI----KKVSEEGKPSAFEDLPKVIRRKRDSSYRELEARKNRVKDLEKIYMDMSMQKELQKKGRKRKLR--EDEMVSPTSRPVYKWRQERKR 229          
BLAST of Ggra6747.t1 vs. uniprot
Match: A0A383V6N4 (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383V6N4_TETOB)

HSP 1 Score: 118 bits (295), Expect = 9.150e-29
Identity = 94/261 (36.02%), Postives = 143/261 (54.79%), Query Frame = 0
Query:    1 MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSSTSGG-RVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAARPKN-HIKFVQDV-------------NGDEQVINVESRKRG-----QDKSTSSKADKLVAKEQGKAYRYLKRRAERQEKLDTVLTDMQTAKNLMSKGRRFVVRRANPETGAPPVFKWRRERR 241
            MSS + N + R+ H+ER+QPA R +K+GLLEKKKDY LRAKD+++K   +K L+ KA  RNPDEFY+ M  + T  G  ++R   A +          +++ +L +TQD+KY+ LKS  E A   ++++ LHF   A   P+N H  FV                   E +    +R R      Q  + S+   + V + +  AYR L +R ERQ+KL  + + M   K LM KGR+  +  A+ +  + PV++W+RER+
Sbjct:    1 MSSLA-NAIKRKTHKERSQPAAR-RKYGLLEKKKDYLLRAKDYHKKDKTIKHLQSKAEQRNPDEFYFAMEKAQTKDGVHIQRSTEANKYS--------QQELLLMKTQDAKYLGLKSRTEAAKAEKLKESLHFIGMA---PQNKHTVFVDSAAEAASFKAAQFFDTPAELLGRAYNRPRNAQLQQQQAAPSTATAERVERRKASAYRELSQRLERQQKLAGLASKMAMDKELMGKGRKRKL--ADADGSSQPVYRWKRERK 246          
BLAST of Ggra6747.t1 vs. uniprot
Match: A0A7S2SZX1 (U3 small nucleolar RNA-associated protein 11 n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2SZX1_9CHLO)

HSP 1 Score: 118 bits (296), Expect = 1.010e-28
Identity = 90/256 (35.16%), Postives = 139/256 (54.30%), Query Frame = 0
Query:    1 MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRVKILREKAAFRNPDEFYYGMINSSTSGGRVKRVLNAKEKDAIPIANRDREQRMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAARPKNHIKFVQDVNGDEQVINVESRKRGQD-------KSTSSKADK-------LVAKEQGKAYRYLKRRAERQEKLDTVLTDMQTAKNLMSKGRRFVVRRANPETGAPPVFKWRRERRR 242
            MSS  K  +  R H+ER+QP+ R +K G LEK KDY LRA+D ++K   +++LREKA FRNPDEFY+GM  S T GG     ++  + D    ++   EQ ML +TQD KYV++K+  ER  + +++  LH    A A    HI FV +     Q    +      +       + T  + D+       +  K++ K Y+ L++R  R+ +L++V   M   K  M KGR+  VR+ +      PV++W++ER+R
Sbjct:   22 MSSTYKKAIQGRTHKERSQPSDR-KKLGFLEKHKDYVLRARDFHKKEKALEVLREKAEFRNPDEFYFGMQKSKTVGG-----VHVGDSDPTQYSH---EQLMLMKTQDRKYVEMKAQVERKKVEKLQASLHQLRDAPA--NKHIVFVDNEEDQRQFSPADYFNTSPEYLDSAFHRPTREQLDEDAWTVSSVHEKKKSKLYKELEQRKHRKSELESVALRMDMEKAAMGKGRKRKVRKTSLGGKGIPVYRWKKERKR 266          
The following BLAST results are available for this feature:
BLAST of Ggra6747.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXD91.290e-10466.53U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
R7QSI41.490e-7051.84U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A5J4Z8K84.520e-4041.80U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
probable U3 small nucleolar RNA-associated protein 11 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4B672.390e-3753.16probable U3 small nucleolar RNA-associated protein... [more]
A0A176WM095.770e-3541.49U3 small nucleolar RNA-associated protein 11 n=2 T... [more]
B8LM474.670e-3238.96U3 small nucleolar RNA-associated protein 11 n=2 T... [more]
probable U3 small nucleolar RNA-associated protein 11 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D98D9F1.280e-2936.69probable U3 small nucleolar RNA-associated protein... [more]
A0A2Z7A9A54.210e-2936.84U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A383V6N49.150e-2936.02U3 small nucleolar RNA-associated protein 11 n=2 T... [more]
A0A7S2SZX11.010e-2835.16U3 small nucleolar RNA-associated protein 11 n=3 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007144Small-subunit processome, Utp11PFAMPF03998Utp11coord: 11..242
e-value: 5.9E-50
score: 170.4
IPR007144Small-subunit processome, Utp11PIRSFPIRSF015952U3snoRNP11coord: 1..242
e-value: 1.1E-48
score: 164.1
IPR007144Small-subunit processome, Utp11PANTHERPTHR12838U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11coord: 1..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:341931..342659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6747.t1Ggra6747.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 341931..342659 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6747.t1 ID=Ggra6747.t1|Name=Ggra6747.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=243bp
MSSFSKNILPRREHRERAQPALRIQKHGLLEKKKDYKLRAKDHNRKRLRV
KILREKAAFRNPDEFYYGMINSSTSGGRVKRVLNAKEKDAIPIANRDREQ
RMLAETQDSKYVQLKSSAERASLRRMRDRLHFTSAAAARPKNHIKFVQDV
NGDEQVINVESRKRGQDKSTSSKADKLVAKEQGKAYRYLKRRAERQEKLD
TVLTDMQTAKNLMSKGRRFVVRRANPETGAPPVFKWRRERRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007144SSU_processome_Utp11