Ggra6666.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6666.t1
Unique NameGgra6666.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length441
Homology
BLAST of Ggra6666.t1 vs. uniprot
Match: A0A2V3IX05 (WD repeat-containing protein JIP5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX05_9FLOR)

HSP 1 Score: 416 bits (1068), Expect = 1.080e-139
Identity = 211/364 (57.97%), Postives = 266/364 (73.08%), Query Frame = 0
Query:   20 YLELKYAPICVAAHPSKPSLLSGFSEGEVVLNVFSSTCGANGPQHMQKELYTIENSCIQTTFHGSENFVVASSKGKLLTFDVSRTTPLETKQLPNDEEGNPRTATTFWVLDESSFLVGDDCGGLHLFDIRTSQNAAVRTGETLGGSTCSCLEQADYISAIAPVCAFDKDAFLVTSGDGTLCAYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVLDYPVHTEESKF--DSLDSLGKKXXXXXXXEE-RWPVEDMVRMRGLNVPVFALLGHGSGIQFCDGSGLAEGN 380
            YL+L  APIC+ AHPS+P LL+  S     ++          P+      Y +E+S    +F  +  F +A +   +LTFD+++  P+ T  L   E+ +   ATTF  ++E+SFLVGDD GGLHL+D+RTS  A+ +       +  SCLEQADY+SAI PV AF+KDAFLVTSGDGTLCAYDLRFPPKP ++LQYAFDSFQED+LSLA+LPKH+LAVAGTLTGPLN+Y+LRFMDDS DPDSAAHVDRFYGHPEAVNVV+ WEE+ED+++SASSDGI+RIID+P+RKLVGVL+Y VH EE +   DSL  L K+       +E RWPVE MVR+RGL +PV ALLGH +GIQFC+   L +G+
Sbjct:   14 YLQLHEAPICLDAHPSQPLLLTACSTSGATVSDVKPIFSRQSPRKAAPR-YKVEHSAAAASFFDASRFHLACTDASILTFDINKREPIATVTLSKAEQSDDCVATTFRTVNENSFLVGDDTGGLHLYDVRTSSAASQQ-------ALASCLEQADYVSAIEPVSAFEKDAFLVTSGDGTLCAYDLRFPPKPAVRLQYAFDSFQEDVLSLAILPKHNLAVAGTLTGPLNIYDLRFMDDSYDPDSAAHVDRFYGHPEAVNVVMAWEEEEDIVLSASSDGIVRIIDIPNRKLVGVLEYAVHEEERRGTNDSLQDLRKRREGKKKRKEARWPVEHMVRVRGLGMPVLALLGHSAGIQFCEAGALVDGD 369          
BLAST of Ggra6666.t1 vs. uniprot
Match: A0A7S3B5K8 (Hypothetical protein (Fragment) n=2 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3B5K8_9VIRI)

HSP 1 Score: 97.1 bits (240), Expect = 6.120e-20
Identity = 59/151 (39.07%), Postives = 93/151 (61.59%), Query Frame = 0
Query:  171 EQADYISAIAPVCAFD--KDAFLVTSGDGTLCAYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYP 315
            + +DYISA++   +FD  +   L TSGDGTL  +DLR     K KL++  D+ +++LLSLAVL +    V G+  G LN+Y+   ++D  D        R  GHPE+V+ ++  + DED +I+ASSDG++R++ +   +LVGV+    D+P
Sbjct:   16 KHSDYISALSGGGSFDGGEHTLLATSGDGTLSGFDLR-----KGKLEHRSDNQEDELLSLAVLKRGRKVVTGSTEGVLNIYSWGHLEDCSD--------RLPGHPESVSALV--KVDEDRLITASSDGLLRVVSIQPNRLVGVIGEHSDFP 151          
BLAST of Ggra6666.t1 vs. uniprot
Match: A0A5J4XDF7 (Uncharacterized protein (Fragment) n=2 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XDF7_9CHLO)

HSP 1 Score: 98.2 bits (243), Expect = 7.230e-19
Identity = 83/280 (29.64%), Postives = 139/280 (49.64%), Query Frame = 0
Query:   33 HPSKPSLLSGFSEGEVVLNVFSSTCGANGPQHMQKELYTIENSCIQTTFHGSENFVVASSKGKLLTFDVSRTTPLETKQLPNDEEGNPRTATTFWVLDESSFLVGDDCGGLHLFDIRTSQNAAVRTGETLGGSTCSCLEQADYISAIAPVCAFDKDAFLVTSGDGTLCAYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVL 312
            HP++  L +G   G+V ++ +S   GA   +  QK L++   SC    F    + +++ S  K +    + T  ++  Q    +  +P   +   VL E+SF+ GDD G +  +D R  +            ST S     D++S +  V    +   +  SGDGTL   DLR     K++ Q   D+  ++LLS+ ++      V+GT +G +NLY+   MDD  D        RF GHP +V+ ++ +  D D +I+ SSDGIIRI+++   +++GVL
Sbjct:    7 HPAECLLATGIITGQVRISEYSEN-GAT--RKSQKRLHS--ESCRAVQFSALGDALLSGSADKSIVLLDTGTCKVQRTQ----QNAHPTGISRMAVLSETSFVSGDDNGLIKTWDQRQPE------------STASFEAHTDFVSDM--VLHEREQCLVAVSGDGTLTINDLR---TNKVRAQSENDA-DDELLSVVLVKGDKKVVSGTQSGVINLYSWGHMDDCSD--------RFPGHPSSVDALVKY--DADTVITGSSDGIIRIVNILPNRMLGVL 249          
BLAST of Ggra6666.t1 vs. uniprot
Match: A0A7R9Y5L9 (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y5L9_9VIRI)

HSP 1 Score: 95.9 bits (237), Expect = 7.340e-18
Identity = 66/193 (34.20%), Postives = 101/193 (52.33%), Query Frame = 0
Query:  133 SFLVGDDCGGLHLFDIRTSQNAAVRTGETLGGSTCSCLEQADYISAIAPVCAFDKDAFLVTSGDGTLCAYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVLDYPVHTEESKFDS 325
            +F  GDD G + ++D R   ++   +               D+IS +  V   DK   L TSGDGTL  YDLR     + KL++  D+ +++LLS+ VL +    V G+  G L++Y+   ++DS D        RF GHPE+V  +     DED +I+AS DG++R++ V   KL+GV+      E SKF +
Sbjct:  195 TFASGDDEGEIKVWDSRVCASSGSSSKPVHSFDA-----HEDFISDLTYVA--DKQMLLATSGDGTLSGYDLR-----RGKLEHRSDNQEDELLSVCVLKQGKKVVTGSTEGVLSIYSWGHLEDSTD--------RFPGHPESVAALRAL--DEDTLITASGDGVLRVVSVQPNKLLGVIG-----EHSKFST 360          
BLAST of Ggra6666.t1 vs. uniprot
Match: A0A484DTI7 (ANAPC4_WD40 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTI7_BRELC)

HSP 1 Score: 93.6 bits (231), Expect = 2.300e-17
Identity = 70/204 (34.31%), Postives = 100/204 (49.02%), Query Frame = 0
Query:  129 LDESSFLVGDDCGGLHLFDIRTSQNAAVRTGETLGGSTCSCL----EQADYISAIAPVCAFDKDAFLVTSGDGTLCAYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPVHTEESKFD 324
            L ++ F+ GDD G + ++D R  +                CL    E  DYIS  A   A  +D  L TSGDG L AYDLR     K  L    D   ++LLS+AV+      V G+  G L +++     D  D        RF GHP++V  VL  + DED I++ SSDGI+R++ +   KL+GV+    D+PV   +  +D
Sbjct:  110 LSDNVFVSGDDQGCIKIWDTRQHR----------------CLSEFKEHTDYISGFATTSA--QDHLLATSGDGRLSAYDLR-----KNALVGKSDELDDELLSIAVIKNGRKIVCGSQDGVLVIFSWGIWGDMSD--------RFPGHPDSVEAVL--KVDEDTILTGSSDGIVRVVQLHPNKLLGVIGDHEDFPVENLKFTYD 280          
BLAST of Ggra6666.t1 vs. uniprot
Match: A0A3M6VF45 (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VF45_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.310e-15
Identity = 66/200 (33.00%), Postives = 98/200 (49.00%), Query Frame = 0
Query:  129 LDESSFLVGDDCGGLHLFDIRTSQNAAVRTGETLGGSTCSCLEQADYISAIAPVCAFDKDAFLVTSGDGTLCAYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPVHTEESKFD 324
            L  + F  GDD G + ++D R  +  A               E  DYIS  A   A  +D  L TSGDG L AYDLR     K  L    D   ++LLS+AV+      V G+  G L +++     D  D        RF GHP++V+ +L  + DED +++ SSDGI+R++ +   KL+G++    D+PV   +  +D
Sbjct:  110 LSANVFASGDDLGCIKIWDTRQHRCLA------------EFKEHTDYISGFATNPA--QDHLLATSGDGRLTAYDLR-----KNVLAGKSDELDDELLSVAVIKNGRKIVCGSQNGVLVIFSWDTWGDMSD--------RFPGHPDSVDALL--KVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVENLKFSYD 280          
BLAST of Ggra6666.t1 vs. uniprot
Match: A0A662WRV0 (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRV0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 5.710e-15
Identity = 66/196 (33.67%), Postives = 95/196 (48.47%), Query Frame = 0
Query:  137 GDDCGGLHLFDIRTSQNAAVRTGETLGGSTCSCL----EQADYISAIAPVCAFDKDAFLVTSGDGTLCAYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPVHTEESKFD 324
            GDD G + ++D R  +                CL    E  DYIS  A   A  +D  L TSGDG L AYDLR     K  L    D   ++LLS++V+      V G+  G L +++     D  D        RF GHP++V  +L  + DED I++ SSDGI+R++ +   KL+G++    D+PV T +   D
Sbjct:   17 GDDQGCIKIWDTRQHR----------------CLSEFKEHTDYISGFATNPA--QDHLLATSGDGRLSAYDLR-----KNVLAGKSDELDDELLSVSVIKNGKKIVCGSQDGVLVIFSWGTWGDMSD--------RFPGHPDSVEAIL--KVDEDTILTGSSDGIVRVVQLHPNKLLGLIGDHEDFPVETLKFSHD 179          
BLAST of Ggra6666.t1 vs. uniprot
Match: B7FSL1 (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FSL1_PHATC)

HSP 1 Score: 84.0 bits (206), Expect = 5.760e-15
Identity = 59/184 (32.07%), Postives = 91/184 (49.46%), Query Frame = 0
Query:  132 SSFLVGDDCGGLHLFDIRTSQNAAVRTGETLGGSTCSCLEQADYISAIAPVCAFDKDAFLVTSGDGTLCAYDLRFPPK---PKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVL 312
            S    GD+ G + L+D R   ++    G    G      E  DY+SA     + D    L +S D T+  YDLR   +    K K+    D  +++LLSL V+ +    VAGT  G L +++     D  D        RF GHP +++ +L  + DED +++ SSDG+IR++ +   KL+GVL
Sbjct:    8 SVMATGDESGCVRLWDTRLMGSSTASKGMLPAGCVQQWKEHNDYVSAFET--SSDGFTLLASSADCTMSIYDLRMAQQGETDKTKVVRRSDDQEDELLSLLVMKRGKKVVAGTGEGVLAVWSWGTWGDVSD--------RFPGHPASIDALL--KVDEDTLLTGSSDGLIRVVQIHPDKLLGVL 179          
BLAST of Ggra6666.t1 vs. uniprot
Match: A0A6G0RY91 (ANAPC4_WD40 domain-containing protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=A0A6G0RY91_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.030e-14
Identity = 70/203 (34.48%), Postives = 98/203 (48.28%), Query Frame = 0
Query:  129 LDESSFLVGDDCGGLHLFDIRTSQNAAVRTGETLGGSTCSCL----EQADYISAIAPVCAFDKDAFLVTSGDGTLCAYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPVHTEESKF 323
            L  + F  GDD G + ++D R  +                CL    E  DYIS  A   A  +D  L TSGDG L AYDLR     K  L    D   ++LLS+AV+      V G+  G L +++     D  D        RF GHPE+V  +L  + DED +++ SSDGI+R++ +   KL+G++    D+PV  E  KF
Sbjct:  110 LSANVFASGDDQGCVKIWDTRQHR----------------CLSEFKEHTDYISGFATNPA--QDHLLATSGDGRLSAYDLR-----KNVLAGKSDELDDELLSVAVIKNGRKIVCGSQDGVLVIFSWGTWGDMSD--------RFPGHPESVEALL--KVDEDTVLTGSSDGIVRVVQLHPNKLLGLIGDHEDFPV--ENMKF 277          
BLAST of Ggra6666.t1 vs. uniprot
Match: A0A6U1LDK1 (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1LDK1_9CHLO)

HSP 1 Score: 85.9 bits (211), Expect = 1.030e-14
Identity = 62/198 (31.31%), Postives = 104/198 (52.53%), Query Frame = 0
Query:  125 TFWVLDESSFLVGDDCGGLHLFDIRTSQNAAVRTGETLGGSTCSCLEQADYIS--AIAPVCAFDKDAFLVTSGDGTLCAYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYNLRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRIIDVPSRKLVGVL----DYPV 316
            T   +D +    GDD G + L+D+R  Q  A+ T ET G          D+IS    +P    D ++ + +SGDG++  YDL      +  +  + D   ++LLS+AVL      V G+  G + +Y+  + +D  D        RF GHP +++ ++ +  DED II+ SSDG+IRI+++   K++GV+    +YP+
Sbjct:  104 TLECIDAAVLASGDDDGVIKLWDVR--QREAIGTFETHG----------DFISDFTYSP----DNNSLVASSGDGSISVYDLG----TRKLIAQSEDDADDELLSVAVLKNGKKVVCGSQEGVVFIYSWGYFNDCSD--------RFPGHPNSIDALVKF--DEDTIITGSSDGLIRILNILPNKMLGVVGEHDEYPI 271          
The following BLAST results are available for this feature:
BLAST of Ggra6666.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX051.080e-13957.97WD repeat-containing protein JIP5 n=1 Tax=Gracilar... [more]
A0A7S3B5K86.120e-2039.07Hypothetical protein (Fragment) n=2 Tax=Prasinoder... [more]
A0A5J4XDF77.230e-1929.64Uncharacterized protein (Fragment) n=2 Tax=Treboux... [more]
A0A7R9Y5L97.340e-1834.20Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A484DTI72.300e-1734.31ANAPC4_WD40 domain-containing protein n=1 Tax=Brem... [more]
A0A3M6VF451.310e-1533.00Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A662WRV05.710e-1533.67Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
B7FSL15.760e-1532.07Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A6G0RY911.030e-1434.48ANAPC4_WD40 domain-containing protein n=23 Tax=Per... [more]
A0A6U1LDK11.030e-1431.31Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 57..332
e-value: 1.2E-19
score: 72.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..404
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 425..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..440
NoneNo IPR availablePANTHERPTHR19855WD40 REPEAT PROTEIN 12, 37coord: 168..312
NoneNo IPR availablePANTHERPTHR19855:SF23WD REPEAT-CONTAINING PROTEIN JIP5coord: 168..312
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000056_piloncontigtig00000056_pilon:65833..67155 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6666.t1Ggra6666.t1Gracilaria gracilis GNS1m malemRNAtig00000056_pilon 65833..67155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6666.t1 ID=Ggra6666.t1|Name=Ggra6666.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=441bp
MTQDGTPNSYPENSSVEEWYLELKYAPICVAAHPSKPSLLSGFSEGEVVL
NVFSSTCGANGPQHMQKELYTIENSCIQTTFHGSENFVVASSKGKLLTFD
VSRTTPLETKQLPNDEEGNPRTATTFWVLDESSFLVGDDCGGLHLFDIRT
SQNAAVRTGETLGGSTCSCLEQADYISAIAPVCAFDKDAFLVTSGDGTLC
AYDLRFPPKPKLKLQYAFDSFQEDLLSLAVLPKHSLAVAGTLTGPLNLYN
LRFMDDSCDPDSAAHVDRFYGHPEAVNVVLPWEEDEDVIISASSDGIIRI
IDVPSRKLVGVLDYPVHTEESKFDSLDSLGKKKKKKKRKEERWPVEDMVR
MRGLNVPVFALLGHGSGIQFCDGSGLAEGNPTEQVDTERKSREVDLKQDD
QENSGGEAEVSGSSRKKKRRRKGFDDDKKKADQPSFFEGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf