Ggra1759.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1759.t1
Unique NameGgra1759.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length430
Homology
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BLAST of Ggra1759.t1 vs. uniprot
Match: A0A2V3IWF1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWF1_9FLOR)

HSP 1 Score: 217 bits (552), Expect = 1.590e-64
Identity = 116/245 (47.35%), Postives = 163/245 (66.53%), Query Frame = 0 
Query:  191 KSMYESACLSPQLSEMLYATCRLANSNTKAMSFLSRSIRSMYKKVCEICRESGFVSADVQDVLKDIDRINSVAPLNPSPRQKERVDFLEKVCSEEKTVQDPFTMSGCGRNVYKQ------GVRMVDAIELNHGLEQKYAHINAVVSLKSVDELGLRVKGDPKEGIGMKLDLPVCDEPTTMNPKAESFELPGDIMGDQIEVYSVTYQEWRIAVVSGKLSDGRHVLNFNDGVVEHVMLYERLWRPVA 429
            KS+ +   LSPQLS++L+  CRLA ++ KAMSFLS SIRSMY  +C ICR++G V  DV+D+L  ID   S+ PL PSP+   RV FLE+ C +    +D  T S   +++ K+      GV MVDA++LN+  +     +N +V    V+++G+++  D K  +G +L +P+ D+ T+ NP+A   +L GDI+G+Q+EV+SV  Q WR AVVS KL DGRHVL + DGVVE VML E+LWRPVA
Sbjct:   24 KSISKHTPLSPQLSQLLHTACRLAAAHPKAMSFLSSSIRSMYDNLCAICRDTGCVPPDVEDILHTIDTARSIPPLQPSPQLNNRVKFLEEACED----RDVSTFSK--KHLLKEYRISNNGVEMVDAVQLNNLFDDDVDDMNVLVDSGDVEQIGIKLNADHKLFLGERLGIPIRDQRTSENPRAVLCDLTGDIIGEQVEVFSVADQTWRSAVVSYKLPDGRHVLVYFDGVVERVMLREKLWRPVA 262
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BLAST of Ggra1759.t1 vs. uniprot
Match: A0A2V3IWN7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWN7_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 1.460e-46
Identity = 79/124 (63.71%), Postives = 103/124 (83.06%), Query Frame = 0 
Query:   21 VPPRYHSQASAILRAIGDLKKAIDDFLNKIENALYVPYEAARARKDFDTISTMLLNLEKIIEERDILHMRDRDYIGPGKPNGSTIDELLDKAVKQKTTVDAEFHKLTSAAAXXXXXXXXASRWR 144
            +PPR+HSQ+ AILR + +LKK+ ++FLNKI++ALYVPY+AARAR DF+TI+ M+LNL+KI+EERDI+HMR+RD+IGPGK NGST++EL+D+A KQK  VDA+FHKL SA A         SRWR
Sbjct:  176 LPPRHHSQSVAILRLVNELKKSTNEFLNKIDSALYVPYDAARARHDFETINAMVLNLDKIMEERDIMHMRERDFIGPGKTNGSTVEELMDRAGKQKNEVDAQFHKLASAVASAANAAAATSRWR 299
The following BLAST results are available for this feature:
BLAST of Ggra1759.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IWF11.590e-6447.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IWN71.460e-4663.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000050_piloncontigtig00000050_pilon:559578..561104 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1759.t1Ggra1759.t1Gracilaria gracilis GNS1m malemRNAtig00000050_pilon 559578..561104 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1759.t1 ID=Ggra1759.t1|Name=Ggra1759.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=430bp
MSRPSSQAQAPSRQSSVPQPVPPRYHSQASAILRAIGDLKKAIDDFLNKI
ENALYVPYEAARARKDFDTISTMLLNLEKIIEERDILHMRDRDYIGPGKP
NGSTIDELLDKAVKQKTTVDAEFHKLTSAAAAAANAAAAASRWRAPFDAS
EFCENPNCLANLDLSLLARVCKCHKVFRADIHPRRIVQFEKSMYESACLS
PQLSEMLYATCRLANSNTKAMSFLSRSIRSMYKKVCEICRESGFVSADVQ
DVLKDIDRINSVAPLNPSPRQKERVDFLEKVCSEEKTVQDPFTMSGCGRN
VYKQGVRMVDAIELNHGLEQKYAHINAVVSLKSVDELGLRVKGDPKEGIG
MKLDLPVCDEPTTMNPKAESFELPGDIMGDQIEVYSVTYQEWRIAVVSGK
LSDGRHVLNFNDGVVEHVMLYERLWRPVA*
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