|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1855.t1.stop1 | Ggra1855.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000050_pilon 953433..953435 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra1855.t1.start1 | Ggra1855.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000050_pilon 955935..955937 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1855.t1 ID=Ggra1855.t1|Name=Ggra1855.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=835bp MQATANSVTDVILRQHPCSPPVPLSLDPLTTGLHCIHAPLNSPPLSFSNL LSLFEYLRHLSARPAIEREKTIFRIARRSARVLGSIFDIPTVCGWAVFQK IAHVDTRLAALIGSTYVYASLPSALVPFDDVRPSKECHPEVAPYTQLASV LHEALDCLLLSSGQKHDLHLRNIYPHSVWSYGTLFSEGQVRRLAPIAPPP RIFSRYVECPVVGEMLGVPGEVCRHGWITFFHALVPTCVSGGLDFSCPAP LARFMPRSFPRQKAVPASLLLEDLTAPELYYLIRIEQVATGGDVTAVYHE ALQFTDKSQGLHQEFHDRVLHCEALAVKVKREQAEDTFDVDHLRKRSAEN NKVLAYAEQAMCEASSSDEEFEGYTDKGDFAFVYKRDARQPFAELDGYDG WCDEVLTEKKHKAWAVYHPEILMPSEVAALYLDIGVRLYCDSGRSVIIRE DAEAADAAMDGIDDTVIADDVLWTELKPLLDGFHAGVKNAADRFVVALLV SGQVRLYGLYGCVDPSEARHIGRSIGIFMDAPLQVLAFKLKERQLSARND DRDCLLIPVGPACTIVMRFVTEKYSGKYGRVHHSESVVVMPVGCRLGDRR QLKWYAVGAGLFEANGAAPVSLVEMSAHQLDVLSCSATAESDHVVVSAKK GAASVRLRDIGFEAGWTGWSPHLVISGKGKRIVTSVRAHSLTHLVDVLRR MRDGGKEVNLVYSIQEVAAAVVLREVLIGALRVTRVGAGLRWVPTWKMAE QGFVVAHEMELARGVGCRVGGEGEIGILVTNDTMALFAVRGERGGCWDLL FVRLDANIESEKLLVAPQFEGFCWRVCGGKMGAR* back to topspliced messenger RNA >Ggra1855.t1 ID=Ggra1855.t1|Name=Ggra1855.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2505bp|location=Sequence derived from alignment at tig00000050_pilon:953433..955937- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCAGGCAACTGCCAATTCAGTGACTGATGTCATCCTTCGACAACACCC GTGCTCTCCGCCTGTACCGTTGTCTCTTGATCCCCTCACAACCGGTTTGC ACTGCATACACGCTCCTTTAAACTCTCCTCCGCTCTCATTCTCCAACCTT CTCTCATTGTTTGAATACCTGCGTCATTTATCAGCTCGCCCTGCCATAGA ACGGGAGAAAACCATTTTCCGTATTGCTCGCCGCAGTGCACGCGTGCTTG GGTCCATCTTTGATATTCCCACTGTTTGTGGATGGGCCGTCTTTCAGAAG ATCGCTCATGTTGACACTCGACTTGCGGCTTTAATAGGCTCCACCTATGT CTATGCCAGTTTGCCATCCGCGCTCGTGCCGTTTGATGACGTGCGTCCTT CTAAAGAATGCCATCCAGAAGTAGCCCCCTACACTCAACTCGCCAGTGTG TTACATGAAGCGCTTGACTGTTTATTGCTATCTTCCGGTCAGAAGCACGA CCTCCATCTGCGCAATATATACCCTCATTCAGTTTGGTCGTACGGAACAC TCTTTTCAGAAGGACAAGTGCGACGCCTCGCTCCAATCGCTCCACCGCCG CGAATTTTCTCCCGATACGTCGAGTGTCCAGTCGTTGGGGAGATGCTGGG TGTACCCGGGGAAGTCTGTCGCCATGGCTGGATCACTTTCTTTCACGCGC TCGTTCCAACATGTGTGAGCGGCGGATTGGATTTCTCATGTCCAGCGCCA TTGGCGCGATTCATGCCGCGCTCTTTTCCCCGTCAAAAGGCTGTTCCTGC CTCGCTTTTGCTTGAAGATCTCACGGCGCCAGAACTATATTATCTGATTA GAATTGAACAAGTTGCTACTGGTGGAGATGTAACTGCTGTTTATCACGAG GCGCTACAGTTTACCGACAAATCGCAAGGACTGCATCAGGAGTTTCATGA TAGGGTTCTTCACTGCGAAGCACTCGCAGTTAAAGTGAAGAGGGAGCAAG CAGAAGACACATTCGATGTTGATCATCTTCGCAAACGATCGGCAGAAAAC AACAAGGTTCTCGCTTACGCAGAGCAGGCCATGTGTGAAGCGTCTTCAAG CGATGAAGAATTCGAAGGCTACACAGATAAGGGCGACTTTGCTTTTGTGT ATAAACGAGACGCCCGTCAGCCATTTGCTGAACTTGATGGCTATGACGGC TGGTGCGACGAGGTTCTTACGGAGAAGAAGCACAAGGCTTGGGCTGTGTA TCATCCCGAGATATTGATGCCATCTGAAGTGGCGGCACTTTACCTTGACA TTGGGGTCCGTCTGTATTGCGATTCCGGACGAAGCGTGATCATACGGGAA GATGCAGAAGCTGCAGACGCTGCAATGGATGGCATTGACGACACGGTGAT TGCTGACGACGTGCTATGGACGGAGCTTAAGCCGTTACTGGACGGCTTTC ACGCAGGAGTGAAGAATGCTGCGGATCGATTTGTGGTGGCACTACTTGTA TCAGGGCAGGTTCGTCTCTATGGGTTGTACGGGTGTGTGGACCCATCTGA AGCGCGTCATATTGGGAGGAGCATAGGGATCTTCATGGACGCACCATTGC AGGTGTTAGCTTTCAAGCTGAAAGAGCGGCAGTTGTCCGCTCGAAACGAC GATCGCGATTGTCTGTTGATCCCTGTTGGACCCGCGTGCACGATTGTGAT GCGCTTCGTGACGGAGAAGTACTCGGGCAAGTACGGCAGGGTGCACCACT CGGAGTCGGTGGTGGTGATGCCAGTGGGATGCAGACTGGGCGACCGCAGG CAGCTGAAATGGTACGCGGTGGGCGCAGGACTGTTCGAAGCGAATGGTGC GGCGCCGGTGTCTCTGGTGGAGATGAGCGCGCATCAGCTGGACGTGCTGT CGTGCTCGGCGACGGCGGAGAGCGACCACGTGGTGGTTTCCGCGAAGAAG GGGGCGGCGTCGGTGCGGCTACGCGACATTGGGTTCGAGGCCGGGTGGAC GGGGTGGTCGCCGCATCTGGTGATCTCTGGAAAGGGAAAGCGCATCGTGA CGTCGGTGCGCGCCCACAGCCTGACGCACCTGGTGGACGTGCTGCGGAGA ATGAGGGACGGCGGCAAGGAGGTGAATTTGGTGTATAGCATTCAGGAAGT GGCTGCGGCGGTGGTGCTTAGGGAGGTGCTGATTGGAGCGCTGCGCGTGA CGAGGGTGGGCGCGGGGCTGCGGTGGGTGCCGACGTGGAAGATGGCGGAG CAGGGCTTTGTGGTGGCGCATGAGATGGAGCTGGCACGCGGAGTGGGCTG TCGCGTGGGCGGTGAGGGCGAGATTGGAATTTTGGTGACGAACGACACGA TGGCGCTGTTTGCAGTGCGTGGGGAGAGGGGGGGCTGCTGGGATTTGTTG TTTGTGCGATTGGATGCGAACATCGAGTCGGAGAAACTGCTGGTGGCTCC GCAGTTTGAAGGCTTTTGCTGGCGCGTTTGCGGCGGGAAGATGGGCGCCC GGTAG back to topprotein sequence of Ggra1855.t1 >Ggra1855.t1 ID=Ggra1855.t1|Name=Ggra1855.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=835bp
MQATANSVTDVILRQHPCSPPVPLSLDPLTTGLHCIHAPLNSPPLSFSNL LSLFEYLRHLSARPAIEREKTIFRIARRSARVLGSIFDIPTVCGWAVFQK IAHVDTRLAALIGSTYVYASLPSALVPFDDVRPSKECHPEVAPYTQLASV LHEALDCLLLSSGQKHDLHLRNIYPHSVWSYGTLFSEGQVRRLAPIAPPP RIFSRYVECPVVGEMLGVPGEVCRHGWITFFHALVPTCVSGGLDFSCPAP LARFMPRSFPRQKAVPASLLLEDLTAPELYYLIRIEQVATGGDVTAVYHE ALQFTDKSQGLHQEFHDRVLHCEALAVKVKREQAEDTFDVDHLRKRSAEN NKVLAYAEQAMCEASSSDEEFEGYTDKGDFAFVYKRDARQPFAELDGYDG WCDEVLTEKKHKAWAVYHPEILMPSEVAALYLDIGVRLYCDSGRSVIIRE DAEAADAAMDGIDDTVIADDVLWTELKPLLDGFHAGVKNAADRFVVALLV SGQVRLYGLYGCVDPSEARHIGRSIGIFMDAPLQVLAFKLKERQLSARND DRDCLLIPVGPACTIVMRFVTEKYSGKYGRVHHSESVVVMPVGCRLGDRR QLKWYAVGAGLFEANGAAPVSLVEMSAHQLDVLSCSATAESDHVVVSAKK GAASVRLRDIGFEAGWTGWSPHLVISGKGKRIVTSVRAHSLTHLVDVLRR MRDGGKEVNLVYSIQEVAAAVVLREVLIGALRVTRVGAGLRWVPTWKMAE QGFVVAHEMELARGVGCRVGGEGEIGILVTNDTMALFAVRGERGGCWDLL FVRLDANIESEKLLVAPQFEGFCWRVCGGKMGAR* back to topmRNA from alignment at tig00000050_pilon:953433..955937- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1855.t1 ID=Ggra1855.t1|Name=Ggra1855.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2505bp|location=Sequence derived from alignment at tig00000050_pilon:953433..955937- (Gracilaria gracilis GNS1m male) ATGCAGGCAACTGCCAATTCAGTGACTGATGTCATCCTTCGACAACACCC
GTGCTCTCCGCCTGTACCGTTGTCTCTTGATCCCCTCACAACCGGTTTGC
ACTGCATACACGCTCCTTTAAACTCTCCTCCGCTCTCATTCTCCAACCTT
CTCTCATTGTTTGAATACCTGCGTCATTTATCAGCTCGCCCTGCCATAGA
ACGGGAGAAAACCATTTTCCGTATTGCTCGCCGCAGTGCACGCGTGCTTG
GGTCCATCTTTGATATTCCCACTGTTTGTGGATGGGCCGTCTTTCAGAAG
ATCGCTCATGTTGACACTCGACTTGCGGCTTTAATAGGCTCCACCTATGT
CTATGCCAGTTTGCCATCCGCGCTCGTGCCGTTTGATGACGTGCGTCCTT
CTAAAGAATGCCATCCAGAAGTAGCCCCCTACACTCAACTCGCCAGTGTG
TTACATGAAGCGCTTGACTGTTTATTGCTATCTTCCGGTCAGAAGCACGA
CCTCCATCTGCGCAATATATACCCTCATTCAGTTTGGTCGTACGGAACAC
TCTTTTCAGAAGGACAAGTGCGACGCCTCGCTCCAATCGCTCCACCGCCG
CGAATTTTCTCCCGATACGTCGAGTGTCCAGTCGTTGGGGAGATGCTGGG
TGTACCCGGGGAAGTCTGTCGCCATGGCTGGATCACTTTCTTTCACGCGC
TCGTTCCAACATGTGTGAGCGGCGGATTGGATTTCTCATGTCCAGCGCCA
TTGGCGCGATTCATGCCGCGCTCTTTTCCCCGTCAAAAGGCTGTTCCTGC
CTCGCTTTTGCTTGAAGATCTCACGGCGCCAGAACTATATTATCTGATTA
GAATTGAACAAGTTGCTACTGGTGGAGATGTAACTGCTGTTTATCACGAG
GCGCTACAGTTTACCGACAAATCGCAAGGACTGCATCAGGAGTTTCATGA
TAGGGTTCTTCACTGCGAAGCACTCGCAGTTAAAGTGAAGAGGGAGCAAG
CAGAAGACACATTCGATGTTGATCATCTTCGCAAACGATCGGCAGAAAAC
AACAAGGTTCTCGCTTACGCAGAGCAGGCCATGTGTGAAGCGTCTTCAAG
CGATGAAGAATTCGAAGGCTACACAGATAAGGGCGACTTTGCTTTTGTGT
ATAAACGAGACGCCCGTCAGCCATTTGCTGAACTTGATGGCTATGACGGC
TGGTGCGACGAGGTTCTTACGGAGAAGAAGCACAAGGCTTGGGCTGTGTA
TCATCCCGAGATATTGATGCCATCTGAAGTGGCGGCACTTTACCTTGACA
TTGGGGTCCGTCTGTATTGCGATTCCGGACGAAGCGTGATCATACGGGAA
GATGCAGAAGCTGCAGACGCTGCAATGGATGGCATTGACGACACGGTGAT
TGCTGACGACGTGCTATGGACGGAGCTTAAGCCGTTACTGGACGGCTTTC
ACGCAGGAGTGAAGAATGCTGCGGATCGATTTGTGGTGGCACTACTTGTA
TCAGGGCAGGTTCGTCTCTATGGGTTGTACGGGTGTGTGGACCCATCTGA
AGCGCGTCATATTGGGAGGAGCATAGGGATCTTCATGGACGCACCATTGC
AGGTGTTAGCTTTCAAGCTGAAAGAGCGGCAGTTGTCCGCTCGAAACGAC
GATCGCGATTGTCTGTTGATCCCTGTTGGACCCGCGTGCACGATTGTGAT
GCGCTTCGTGACGGAGAAGTACTCGGGCAAGTACGGCAGGGTGCACCACT
CGGAGTCGGTGGTGGTGATGCCAGTGGGATGCAGACTGGGCGACCGCAGG
CAGCTGAAATGGTACGCGGTGGGCGCAGGACTGTTCGAAGCGAATGGTGC
GGCGCCGGTGTCTCTGGTGGAGATGAGCGCGCATCAGCTGGACGTGCTGT
CGTGCTCGGCGACGGCGGAGAGCGACCACGTGGTGGTTTCCGCGAAGAAG
GGGGCGGCGTCGGTGCGGCTACGCGACATTGGGTTCGAGGCCGGGTGGAC
GGGGTGGTCGCCGCATCTGGTGATCTCTGGAAAGGGAAAGCGCATCGTGA
CGTCGGTGCGCGCCCACAGCCTGACGCACCTGGTGGACGTGCTGCGGAGA
ATGAGGGACGGCGGCAAGGAGGTGAATTTGGTGTATAGCATTCAGGAAGT
GGCTGCGGCGGTGGTGCTTAGGGAGGTGCTGATTGGAGCGCTGCGCGTGA
CGAGGGTGGGCGCGGGGCTGCGGTGGGTGCCGACGTGGAAGATGGCGGAG
CAGGGCTTTGTGGTGGCGCATGAGATGGAGCTGGCACGCGGAGTGGGCTG
TCGCGTGGGCGGTGAGGGCGAGATTGGAATTTTGGTGACGAACGACACGA
TGGCGCTGTTTGCAGTGCGTGGGGAGAGGGGGGGCTGCTGGGATTTGTTG
TTTGTGCGATTGGATGCGAACATCGAGTCGGAGAAACTGCTGGTGGCTCC
GCAGTTTGAAGGCTTTTGCTGGCGCGTTTGCGGCGGGAAGATGGGCGCCC
GGTAG back to topCoding sequence (CDS) from alignment at tig00000050_pilon:953433..955937- >Ggra1855.t1 ID=Ggra1855.t1|Name=Ggra1855.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2505bp|location=Sequence derived from alignment at tig00000050_pilon:953433..955937- (Gracilaria gracilis GNS1m male) ATGCAGGCAACTGCCAATTCAGTGACTGATGTCATCCTTCGACAACACCC GTGCTCTCCGCCTGTACCGTTGTCTCTTGATCCCCTCACAACCGGTTTGC ACTGCATACACGCTCCTTTAAACTCTCCTCCGCTCTCATTCTCCAACCTT CTCTCATTGTTTGAATACCTGCGTCATTTATCAGCTCGCCCTGCCATAGA ACGGGAGAAAACCATTTTCCGTATTGCTCGCCGCAGTGCACGCGTGCTTG GGTCCATCTTTGATATTCCCACTGTTTGTGGATGGGCCGTCTTTCAGAAG ATCGCTCATGTTGACACTCGACTTGCGGCTTTAATAGGCTCCACCTATGT CTATGCCAGTTTGCCATCCGCGCTCGTGCCGTTTGATGACGTGCGTCCTT CTAAAGAATGCCATCCAGAAGTAGCCCCCTACACTCAACTCGCCAGTGTG TTACATGAAGCGCTTGACTGTTTATTGCTATCTTCCGGTCAGAAGCACGA CCTCCATCTGCGCAATATATACCCTCATTCAGTTTGGTCGTACGGAACAC TCTTTTCAGAAGGACAAGTGCGACGCCTCGCTCCAATCGCTCCACCGCCG CGAATTTTCTCCCGATACGTCGAGTGTCCAGTCGTTGGGGAGATGCTGGG TGTACCCGGGGAAGTCTGTCGCCATGGCTGGATCACTTTCTTTCACGCGC TCGTTCCAACATGTGTGAGCGGCGGATTGGATTTCTCATGTCCAGCGCCA TTGGCGCGATTCATGCCGCGCTCTTTTCCCCGTCAAAAGGCTGTTCCTGC CTCGCTTTTGCTTGAAGATCTCACGGCGCCAGAACTATATTATCTGATTA GAATTGAACAAGTTGCTACTGGTGGAGATGTAACTGCTGTTTATCACGAG GCGCTACAGTTTACCGACAAATCGCAAGGACTGCATCAGGAGTTTCATGA TAGGGTTCTTCACTGCGAAGCACTCGCAGTTAAAGTGAAGAGGGAGCAAG CAGAAGACACATTCGATGTTGATCATCTTCGCAAACGATCGGCAGAAAAC AACAAGGTTCTCGCTTACGCAGAGCAGGCCATGTGTGAAGCGTCTTCAAG CGATGAAGAATTCGAAGGCTACACAGATAAGGGCGACTTTGCTTTTGTGT ATAAACGAGACGCCCGTCAGCCATTTGCTGAACTTGATGGCTATGACGGC TGGTGCGACGAGGTTCTTACGGAGAAGAAGCACAAGGCTTGGGCTGTGTA TCATCCCGAGATATTGATGCCATCTGAAGTGGCGGCACTTTACCTTGACA TTGGGGTCCGTCTGTATTGCGATTCCGGACGAAGCGTGATCATACGGGAA GATGCAGAAGCTGCAGACGCTGCAATGGATGGCATTGACGACACGGTGAT TGCTGACGACGTGCTATGGACGGAGCTTAAGCCGTTACTGGACGGCTTTC ACGCAGGAGTGAAGAATGCTGCGGATCGATTTGTGGTGGCACTACTTGTA TCAGGGCAGGTTCGTCTCTATGGGTTGTACGGGTGTGTGGACCCATCTGA AGCGCGTCATATTGGGAGGAGCATAGGGATCTTCATGGACGCACCATTGC AGGTGTTAGCTTTCAAGCTGAAAGAGCGGCAGTTGTCCGCTCGAAACGAC GATCGCGATTGTCTGTTGATCCCTGTTGGACCCGCGTGCACGATTGTGAT GCGCTTCGTGACGGAGAAGTACTCGGGCAAGTACGGCAGGGTGCACCACT CGGAGTCGGTGGTGGTGATGCCAGTGGGATGCAGACTGGGCGACCGCAGG CAGCTGAAATGGTACGCGGTGGGCGCAGGACTGTTCGAAGCGAATGGTGC GGCGCCGGTGTCTCTGGTGGAGATGAGCGCGCATCAGCTGGACGTGCTGT CGTGCTCGGCGACGGCGGAGAGCGACCACGTGGTGGTTTCCGCGAAGAAG GGGGCGGCGTCGGTGCGGCTACGCGACATTGGGTTCGAGGCCGGGTGGAC GGGGTGGTCGCCGCATCTGGTGATCTCTGGAAAGGGAAAGCGCATCGTGA CGTCGGTGCGCGCCCACAGCCTGACGCACCTGGTGGACGTGCTGCGGAGA ATGAGGGACGGCGGCAAGGAGGTGAATTTGGTGTATAGCATTCAGGAAGT GGCTGCGGCGGTGGTGCTTAGGGAGGTGCTGATTGGAGCGCTGCGCGTGA CGAGGGTGGGCGCGGGGCTGCGGTGGGTGCCGACGTGGAAGATGGCGGAG CAGGGCTTTGTGGTGGCGCATGAGATGGAGCTGGCACGCGGAGTGGGCTG TCGCGTGGGCGGTGAGGGCGAGATTGGAATTTTGGTGACGAACGACACGA TGGCGCTGTTTGCAGTGCGTGGGGAGAGGGGGGGCTGCTGGGATTTGTTG TTTGTGCGATTGGATGCGAACATCGAGTCGGAGAAACTGCTGGTGGCTCC GCAGTTTGAAGGCTTTTGCTGGCGCGTTTGCGGCGGGAAGATGGGCGCCC GGTAG back to top
|