Ggra909.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra909.t1
Unique NameGgra909.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length467
Homology
BLAST of Ggra909.t1 vs. uniprot
Match: A0A2V3IPN3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPN3_9FLOR)

HSP 1 Score: 285 bits (730), Expect = 5.980e-87
Identity = 182/463 (39.31%), Postives = 266/463 (57.45%), Query Frame = 0
Query:    1 MLVLTIPISSGIVNALVFLVFDFLLLTLFASALQALQWRSVRRRLLKESRIVQLSESPYGPLAVGIRNDHTFRHHVLVIVHFIFLLLLFLHALGINGRTAQTPRAISRSFVTGL-ANASQFGIDRISARQFSNCLTYS-EPSISYYPLAFDTIPPAIVSDPVGLRDENSSIVPFDHTSFVCQTF-NLDPLIVVPSCGESDLDCSNLNITSRTTLVATRST----------QPFVKSIVNLAGNPPPLLSFHLSARLEDVSQPEQHPLGSYNRLICRQLPKREVADAAA-NVVSFNCLFGKWNQNASLFTFRLGSATTTAEGS--SNETWNSLVDMG--LPIAFTATTAQMSIEWRADLAGEHIFVEGLFGLKNDRLTARAFLDLLVARAVVPTFADANNTELREQVPFNVTDIHVAAAAGYVIL----FVFVVSLTIVLRFIREGDEPNILTWGGLSRMLDNA 441
            M  LT+ I SG++NA V+++FD L++  F S L + Q   V R L  ++ +  + +S +  LA GIR+ ++  H  L+  H IFL ++F   LGINGRT QT R ISRSF++ L A+  +FGIDR+S R F++C T +   S++Y+P+AF+ +P   VSDP G RD    +VP D  SF CQ+F NL P++ VP CG +   C+N+      TL+A   T          +P+ +  + L+GNPPP + FHL AR+   S      + ++NRLICR+ P   + D    N    NC+FGKW+ N +LFTFR+G A      +  ++ TW+ L      L + F+ATTA  +++W A   GE  F E LF ++ND + A+AFLD LV RA  P+ A  +N  L E VP NVTDIH+ A   YVI+    F+  ++L +    +      NIL + GL  +  +A
Sbjct:   51 MAALTLNIPSGLINAGVYVLFDVLVVATFVSLLASFQAWRVSRTLFSDNTVT-VRDSRFSFLAPGIRSLNSHAHLPLIACHVIFLCIIFALNLGINGRTRQTTRPISRSFLSKLSASEFEFGIDRLSFRLFASCTTPNFNSSMTYFPVAFNAVPNRSVSDPTGFRDSQGKLVPLDVNSFQCQSFGNLPPILHVPRCGATPQQCTNVVTAPIHTLIANTMTPNSTNKITASKPWHRPTIFLSGNPPPTVRFHLPARVHSPSYHPNSTMLTFNRLICRETPYNPLPDPQRRNSFWLNCIFGKWDSNDTLFTFRVGHAVAPKLSTLPNSPTWDQLQSQNSYLFVNFSATTAVSTVQWPAHKYGESAFAEALFAIRNDLMPAKAFLDELVTRASAPS-ATGSNIALLEPVPENVTDIHLGAFVSYVIVLFAVFIPYLALHVHRNVLGTPRFRNILGYNGLGSVFMHA 511          
BLAST of Ggra909.t1 vs. uniprot
Match: A0A2V3IPL9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPL9_9FLOR)

HSP 1 Score: 181 bits (458), Expect = 6.810e-48
Identity = 151/463 (32.61%), Postives = 223/463 (48.16%), Query Frame = 0
Query:    5 TIPISSGIVNALVFLVFDFL-LLTLFASALQALQWRSVRRRLLKESRIVQLSESPYGPLAVGIRNDHTFRHHVLVIVHFIFLLLLFLHALGINGRTAQTPRAISRSFVTGLANAS-QFGIDRISARQFSNCLTYSEP--SISYYPLAFDTIPPAIVSDPVGLRDENSSIVPFDHTSFVCQTF-NLDPLIVVPSCGESDLDCSNLNITSRTTLVATRSTQPF------VKSIVNLAGNPPPLLSFHLSARLEDVSQPEQHPLGS--YNRLICRQLPKREVADAAANVVSFNCLFGKWNQNASLFTFRLGSATTTAEGSSNETW-NSLVDMGLP--IAFTATTAQMSIEWRADLAGEHIFVEGLFGLKNDRLTARAFLDLLVARAVVPTFADAN--NTELREQVPFNVTDIHVAAAAGYVILFVFVVSLTIVLR----FIREGDEPNILTWGGLSRMLDNAFSDE 445
            TIPI S  VNA+VFL+ D L  + +  S+LQ +Q R  RRRL +  R V L ES +     GI  D   R  +L++ + + +L++FL  L ING T    + ISR ++T LA A   +   R+    FS+C+  S    S++YYP AF+TI    + D +  R++    VP D  S  CQ+F N+  L+ +P CG+   +CSN+  +    L               VK +         L+ FH + +      P +  L +  YNRLIC Q P R    + A  V F C+ G W+Q A  FTFR+G A+      S   W +SL    +P   AF   T +  + W     GE   V  L  +  D ++AR+FLD LVARA++     A     +L E +   VT I    A GY + F+F    T+  R      R G + +I ++ G+ ++L     +E
Sbjct:    3 TIPIESKYVNAVVFLIVDLLCFMIIIGSSLQKVQARYTRRRLQRGYR-VHLRESRFAHFLPGILKDGLRRTRLLILSYLLLVLVVFLLTLTINGETEVMQKTISRQYITALAAAPFDYNSARLHPSVFSHCVETSTTTSSVTYYPTAFNTIENQTIFDRMAFRNKQGEPVPIDSESKQCQSFQNVPSLLTIPRCGKDMHECSNVEESDMFLLQILSKKNDIEDPWQSVKRLTTRGSGEDSLVLFHANVK------PIRPVLATTPYNRLICLQRPLRGSRFSGA-AVWFTCVLGTWSQFADRFTFRVGVASV-----SFLRWEDSLRQKFIPDVTAFQIMTTEAVLPWSYTTGGEDAIVNALVPVSEDTVSARSFLDGLVARALIAQEVSATPYKGQLFEPIEQAVTKIQAVGAWGYAV-FLFATVATLAFRGWFLVTRPGGQLDITSYSGMLQLLSYVSGNE 451          
The following BLAST results are available for this feature:
BLAST of Ggra909.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IPN35.980e-8739.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IPL96.810e-4832.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..394
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 395..420
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 37..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 421..466
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..36
NoneNo IPR availableTMHMMTMhelixcoord: 395..417
NoneNo IPR availableTMHMMTMhelixcoord: 11..33
NoneNo IPR availableTMHMMTMhelixcoord: 76..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:326350..327750 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra909.t1Ggra909.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 326350..327750 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra909.t1 ID=Ggra909.t1|Name=Ggra909.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=467bp
MLVLTIPISSGIVNALVFLVFDFLLLTLFASALQALQWRSVRRRLLKESR
IVQLSESPYGPLAVGIRNDHTFRHHVLVIVHFIFLLLLFLHALGINGRTA
QTPRAISRSFVTGLANASQFGIDRISARQFSNCLTYSEPSISYYPLAFDT
IPPAIVSDPVGLRDENSSIVPFDHTSFVCQTFNLDPLIVVPSCGESDLDC
SNLNITSRTTLVATRSTQPFVKSIVNLAGNPPPLLSFHLSARLEDVSQPE
QHPLGSYNRLICRQLPKREVADAAANVVSFNCLFGKWNQNASLFTFRLGS
ATTTAEGSSNETWNSLVDMGLPIAFTATTAQMSIEWRADLAGEHIFVEGL
FGLKNDRLTARAFLDLLVARAVVPTFADANNTELREQVPFNVTDIHVAAA
AGYVILFVFVVSLTIVLRFIREGDEPNILTWGGLSRMLDNAFSDETTRRD
GSLRVSMKSLEKHVFL*
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