Ggra900.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra900.t1
Unique NameGgra900.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length316
Homology
BLAST of Ggra900.t1 vs. uniprot
Match: A0A2V3J4L9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4L9_9FLOR)

HSP 1 Score: 223 bits (567), Expect = 9.600e-68
Identity = 124/280 (44.29%), Postives = 179/280 (63.93%), Query Frame = 0
Query:   49 PTSAKLA--LLTNDSLLEELSD-NKQFVYFPSANVLLASIAKGGSTSLYHWFFHGLLG-QEYDNRRCREHVSPNVQNIRGPCWNSEAKYLSDLSKREQRSVLTSHNTLRMAVQRDPFERLISAFNDKVECITDKYNADL-GYSVIVPTLREQARLPHSPRPCMNISEFATALDRIRQ-----------QKVIPLDMINAHFRPQQLYFDEVPYDMVLDVGEIGNVTILKPVLERLPYREMVKDGIPHFNKVGRGELVIPENAAKKLYRFAMESQLGELRH 312
            P SA+L   L  +D+LL+ ++D N+ FVY PSA++LLA++AKGGSTSL+   F G+ G   Y  ++C  +V     N+  PCWN++A YL +LS   +R VLT   TLR+A+QR+P++RL+SAF  K  C T  Y  D+     +VPTLR QA LP +   CMNISEFA ALDR RQ            K+  L  ++ H RPQQ +F+ + Y +VLDV ++ NVT L P+L RLP+ ++V DG+   +      L++PE AA +L+RFA+ES++G +++
Sbjct:   23 PGSARLTSPLADDDALLKLITDKNRDFVYIPSADILLATLAKGGSTSLFQCIFAGVTGVPRYSVKQCGSYV----HNVHSPCWNNQATYLYNLSLPHRRKVLTGATTLRVAIQRNPYDRLLSAFKSKFTCNTTLYGTDVRNRESMVPTLRRQAALPLTQPNCMNISEFAEALDRCRQIVTSNRTLPFASKLKHLRKLDIHIRPQQFFFEYISYHIVLDVDDLSNVTNLTPLLRRLPFVDLVSDGVRQEHASKSYNLLVPELAAGQLHRFALESKVGAIKY 298          
BLAST of Ggra900.t1 vs. uniprot
Match: A0A2V3ISN0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISN0_9FLOR)

HSP 1 Score: 149 bits (377), Expect = 8.550e-39
Identity = 94/303 (31.02%), Postives = 156/303 (51.49%), Query Frame = 0
Query:    8 TQSRCQQLAVLLISLIVLALSPISFLFLSSRLPLPRPPVESPTSAKL----ALLTNDSLLEELSDNKQFVYFPSANVLLASIAKGGSTSLYHWFFHGLLGQEYDNRRCREHVSPNVQNIRGPCWNSEAKYLSDLSKREQRSVLTSHNTLRMAVQRDPFERLISAFNDKVECITDKYNADLGYSV-IVPTLREQARLPHSPRPCMNISEFATALDRIR---QQKVIPLDMINAHFRPQQLYFDEVPYDMVLDVGEIGNVTILKPVLERLPYREMVKDGIPHFNKVGRGELVIPENAAKKLYRFA 302
            ++SR      LL  +  L L+ + F   +  +PL  P   SP    L    + LT   + +  SD   F+Y P   +L+ + AK  ST+L+ W    ++G    N  C    +  +Q+   PCW  +  + S+LS+ ++ S+L S + LR+A+ RDPF+RL+SA+  KV C +  +  D+   V  VP L  QA +  +   C++++ FA  LDR+R   +Q    L  +N HFRPQ  YF  + YD+++D+  + N ++  P+L RL +  +  D     +   +    IPE  A +L++FA
Sbjct:   56 SRSRTPWRVALLCIVCTLFLAALHFFTHTRCIPLAHP---SPALHSLQPYHSFLTAPDIFDATSD---FIYIPYGRLLITTTAKVASTALWTWLHPAIVGHRSQNP-CN---TTYIQHFAHPCWQGKPIHPSNLSRHQKYSLLKSASVLRVAITRDPFQRLLSAWKSKVACDSHDFGTDVQDRVKFVPRLLRQAGMNRTQDQCLSLAGFAQVLDRLRIKAEQNRFDLRTLNIHFRPQLSYFSVIDYDIIMDISHVSNASVFAPILRRLQFPALADDQPAKMHASSQRLQAIPETTAVQLFKFA 348          
BLAST of Ggra900.t1 vs. uniprot
Match: R7QUW9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUW9_CHOCR)

HSP 1 Score: 143 bits (360), Expect = 2.050e-36
Identity = 71/240 (29.58%), Postives = 132/240 (55.00%), Query Frame = 0
Query:   68 DNKQFVYFPSANVLLASIAKGGSTSLYHWFFHGLLGQEYDNRRCREHVSPNVQNIRGPCWNSEAKYLSDLSKREQRSVLTSHNTLRMAVQRDPFERLISAFNDKVECITDKYNADLGY-SVIVPTLREQARLPHSPRPCMNISEFATALDRIRQQKV---IPLDMINAHFRPQQLYFDEVPYDMVLDVGEIGNVTILKPVLERLPYREMVKDGIPHFNKVGRGELVIPENAAKKLYRFAM 303
            ++  F Y P + + + + +K GST+L+ W   GL G+  D + C+      V N + PCW  +  +  +++  E+  +L     LR+A+ R+PFER++SA+  K  C +D +  D+     ++P +  QA++      C++I+ FA  LD++R+        + +++ HFRPQ+ +FD + Y  +LDV  + NVT L+P++ R+P+ E++ +G    +        + E  A  LY+FA+
Sbjct:  106 EDSDFAYIPESKIFMTTTSKVGSTTLWTWLHKGLSGKSSD-KECK---GSQVTNFQAPCWQGKVLHPHNMTDLERWKILNDPEVLRIAITRNPFERILSAWKSKAACESDDFGTDVRERDRLIPGMLRQAQM-RKGASCLSITSFAEVLDKLRRMSERDDFDMTLLDKHFRPQEFHFDIINYQYILDVSMLDNVTALQPIVRRMPFPELLTEGPTKLSSSRPAYQTLSEPTAALLYKFAI 340          
BLAST of Ggra900.t1 vs. uniprot
Match: A0A7S0QSV2 (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QSV2_9CHLO)

HSP 1 Score: 101 bits (251), Expect = 4.780e-21
Identity = 72/275 (26.18%), Postives = 126/275 (45.82%), Query Frame = 0
Query:   74 YFPSANVLLASIAKGGSTSLYHWFFHGLLGQEYD------------NRRCREHVSPNVQNIRGPCWNSEAKYLSDLSKREQRSVLTSHNTLRMAVQRDPFERLISAFNDKVEC-----------------ITDKYNADLGYSVIVPT----------LREQAR-----LPHSPRPCMNISEFATALDRIRQQKVIPLDMINAHFRPQQLYFDEVPYDMVLDVGEIGNVTILKPVLERLPYREMVKDGIP--HFNKVGRGELVIPENAAKKLYRFA 302
            Y P A++++    KGG+TSL++W + G+ G+E+             ++ C+      VQ+   PCW     + +    +  +  L +  T ++A+ RDP++RL+SA+  K+ C                 +     + L ++   P+          LR++       L H   PC+++ ++  ALD IR +       INAHFRPQ  +FD++ YD  L++  + +   L+P+ E L +       IP  H    G  +L +P    KKL +FA
Sbjct:   35 YIPEADLVICIAPKGGTTSLFNWIYRGMFGREHGLPGDPDPPGVPWDQNCKF----GVQHFEEPCWKGRVIHYNQSGVQANKWRLKNAAT-KVAIFRDPYDRLLSAYKSKIACDDGALIDIEGYARGLLGLAGLNTSALAWTKYGPSCRPGNPCEGGLRQEMTNLYGPLWHYGYPCLSMHDYVRALDLIRTKH--RAREINAHFRPQDCFFDQIDYDYHLNITGLSSAQALRPIAESLHFSAANAQPIPIMHQTAPGTVKLWMPPEDQKKLTQFA 302          
The following BLAST results are available for this feature:
BLAST of Ggra900.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J4L99.600e-6844.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISN08.550e-3931.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUW92.050e-3629.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0QSV24.780e-2126.18Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005331SulfotransferasePFAMPF03567Sulfotransfer_2coord: 71..240
e-value: 1.2E-10
score: 42.0
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..315
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:183463..184410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra900.t1Ggra900.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 183463..184410 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra900.t1 ID=Ggra900.t1|Name=Ggra900.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=316bp
MYYSFVPTQSRCQQLAVLLISLIVLALSPISFLFLSSRLPLPRPPVESPT
SAKLALLTNDSLLEELSDNKQFVYFPSANVLLASIAKGGSTSLYHWFFHG
LLGQEYDNRRCREHVSPNVQNIRGPCWNSEAKYLSDLSKREQRSVLTSHN
TLRMAVQRDPFERLISAFNDKVECITDKYNADLGYSVIVPTLREQARLPH
SPRPCMNISEFATALDRIRQQKVIPLDMINAHFRPQQLYFDEVPYDMVLD
VGEIGNVTILKPVLERLPYREMVKDGIPHFNKVGRGELVIPENAAKKLYR
FAMESQLGELRHLSP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005331Sulfotransferase