Ggra6119.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6119.t1
Unique NameGgra6119.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length562
Homology
BLAST of Ggra6119.t1 vs. uniprot
Match: A0A2V3IJ16 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ16_9FLOR)

HSP 1 Score: 311 bits (798), Expect = 5.210e-95
Identity = 362/572 (63.29%), Postives = 421/572 (73.60%), Query Frame = 0
Query:   17 RRTSRSATDAKTPSR-HGIPTPNRRQSAAAESGXXXXXXVSGAASVVPRSSTTSRLRTPAQDRSDPSRLPAKSPRVLPDRGTPTLSG-VGPSPSRTPLQASPYARRTSTGASRNNTVNRKLNMGDTNPRRASGASGT-RLASQKPRGAKSFLADRKDASSAAGG--------RDSLTG-IDAINARRESLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISSGSARVQAGVTALESFRAARRASLQAQESENEE----ENGEIDHAETQPQAKEEK-SDQPSDSITYPDRLDPIVPSSY---PSRKGPTISERFNDSDINLENVERLRRSLGGRRSIGPNEEMPEEVPQLRRNSLESYMDDGQLR--QDSPPHLGGITSGIENLHCTN-----DGIDHDHSYRRQRSPLKSIEANTDVPKATEWVSKRYSSGENMRRSSILVPDIDDEKAGWPTDDEDVEDLGAW 561
            RR  ++ATD  TP+R   +PT  RR S A              ++  PR++T++RLRTPA+DR DP+RLP KSPRVLPDRGT  L+  V PSP+R PLQASPYARRTS+GA+R  TVNRKLNMGD +PRR SGAS   R    KPR   +F+ADR+D  S A G        R+SLT  +D I ARRE   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    S G+AR Q G+TALESFRAARRASLQA E++N+     EN +      Q  A +   +D+PS+ +T+PDRLDPIVP+     P+R+   +S+RFND++INLE+VERLR SLGGRRSIGPN++MPEEVPQLRR+SLESY +DG LR  ++   +        +    TN        D D   +RQRSPL+SIEANTD  K+TEW+S +  +  + R S + VPDIDDEKAGWPTDDE+VEDLGAW
Sbjct:   60 RRVMKAATDVATPNRLSALPTAARRHSGADAHVRPPRTH----STATPRAATSTRLRTPAKDRLDPARLPVKSPRVLPDRGTANLAAAVTPSPARAPLQASPYARRTSSGAART-TVNRKLNMGDPSPRRLSGASAAVRGNVTKPRTTSTFMADRRDGKSGAVGTATVKGARRESLTTTMDTIAARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----SGGNARGQNGMTALESFRAARRASLQADENDNQNVLRGENDKPASPTIQKGAADSGLADRPSECVTFPDRLDPIVPTGSAFTPARRERRVSDRFNDANINLEHVERLRVSLGGRRSIGPNDQMPEEVPQLRRHSLESYNEDGTLRTAEEYAAYQREKEQKEQREAATNHTSFVQHFDPDSVLKRQRSPLRSIEANTDGVKSTEWLSHKVGTEASKRASMMAVPDIDDEKAGWPTDDEEVEDLGAW 622          
BLAST of Ggra6119.t1 vs. uniprot
Match: A0A2V3IBY4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBY4_9FLOR)

HSP 1 Score: 132 bits (332), Expect = 2.740e-31
Identity = 84/134 (62.69%), Postives = 100/134 (74.63%), Query Frame = 0
Query:   63 PRSSTTSRLRTPAQDRSDPSRLPAKSPRVLPDRGTPTLSG-VGPSPSRTPLQASPYARRTSTGASRNNTVNRKLNMGDTNPRRASGASGT-RLASQKPRGAKSFLADRKDASSAAGGRDSLTGIDAINARRESL 194
            PR++T++RLRTPA+DR DP+RLP KSPRVLPDRGT  L+  V PSP+R PLQASPYARRTS+GA+R  TVNRKLNMGD +PRR SGAS   R    KPR   +F+ADR+D  S A G  ++ G     ARRESL
Sbjct:   13 PRAATSTRLRTPAKDRLDPARLPVKSPRVLPDRGTANLAAAVTPSPARAPLQASPYARRTSSGAART-TVNRKLNMGDPSPRRLSGASAAVRGNVTKPR-THTFMADRRDGKSGAVGTATVKG-----ARRESL 139          
The following BLAST results are available for this feature:
BLAST of Ggra6119.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJ165.210e-9563.29Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IBY42.740e-3162.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 356..376
NoneNo IPR availableCOILSCoilCoilcoord: 247..288
NoneNo IPR availableCOILSCoilCoilcoord: 184..218
NoneNo IPR availableGENE3D1.10.287.1490coord: 179..333
e-value: 1.3E-5
score: 26.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 435..458
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 528..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 546..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..389
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..420

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:598078..599763 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6119.t1Ggra6119.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 598078..599763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6119.t1 ID=Ggra6119.t1|Name=Ggra6119.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=562bp
MADATTPTRSSAIPSTRRTSRSATDAKTPSRHGIPTPNRRQSAAAESGIP
TPRRVSGAASVVPRSSTTSRLRTPAQDRSDPSRLPAKSPRVLPDRGTPTL
SGVGPSPSRTPLQASPYARRTSTGASRNNTVNRKLNMGDTNPRRASGASG
TRLASQKPRGAKSFLADRKDASSAAGGRDSLTGIDAINARRESLKVRRES
LAARRESLAARREALKARKESLPDRRDPASDRTEPSSARRESITARRDSL
TTRRDSLNARRESLAARRESLNARRDSLNARRESFKARRGNLNVKRDSLT
GRHDSLTARRENPGVRRDSLNSRRDSAGRRISSGSARVQAGVTALESFRA
ARRASLQAQESENEEENGEIDHAETQPQAKEEKSDQPSDSITYPDRLDPI
VPSSYPSRKGPTISERFNDSDINLENVERLRRSLGGRRSIGPNEEMPEEV
PQLRRNSLESYMDDGQLRQDSPPHLGGITSGIENLHCTNDGIDHDHSYRR
QRSPLKSIEANTDVPKATEWVSKRYSSGENMRRSSILVPDIDDEKAGWPT
DDEDVEDLGAW*
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