Ggra6192.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6192.t1
Unique NameGgra6192.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length740
Homology
BLAST of Ggra6192.t1 vs. uniprot
Match: A0A2V3IZ40 (ATP-dependent DNA helicase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ40_9FLOR)

HSP 1 Score: 806 bits (2081), Expect = 8.890e-284
Identity = 420/658 (63.83%), Postives = 503/658 (76.44%), Query Frame = 0
Query:   10 DELARELGDSVREKREQVSEAQRRLXXLCXXXXXXXXXXXXRLKLLRERADAAFDWLHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEFKNQCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGPVRLQKMYEMYKYACSRGLGSGNLCRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTIGEEDVITNLDRIEIALWKENEARASLFAAK-VRRTEMKEAKAESSHVDDCEVILIE 666
            DEL   L   V  KR QV++A RRL    XXXXXXXXXXXXR KLL+ RADAAF+WL  C WD RL+ A +D F +SSFRPLQ  ALNATLMARDVFAILPTGAGKSLIYQLAAVVD GLTLVVSPL+SLSMDQR+AL    IRA+CLHSE++K++QKAIY  F+PS AF  +S HPR   +    W  DDV P+VLFVTPEQVARSKRLLSRLE L+E GHLSRIC+DEAHCCSSWGHDFR +YRKL ILRRQCPSTPI+AL+ATCD  TVEDV +VLEM+HPVIFRG ++RPNLFYEVR KADTD  VI DIA+W+ TEFK QCGIIYVLSRK+A  YA  LA+ G D  CYH D+D + R  VH QWS  +L +VVATIAFGLGIDHPHVRFIIHAT+A+SLEAYYQESGRAGRDGLP+KCIVL KP+DFARMSAFV DKG  R++K+Y MY+YACSRGL S +LCRR+LI  +FG+  P R+ EQ  +CCDLC AR G +  ++ S+DV+ +A+DL  MI  +   YP KKTTIL+ A DWGK++K   +R+K  + + +  ++VNTRV I+ +LVL GAL+E HRHSSY++ AYVT  +         I++ LWK++  R  L AAK   +TE  +   E    DD E+ +++
Sbjct:   23 DELVARLSQRVVHKRRQVADAHRRLTRXXXXXXXXXXXXXXRQKLLKRRADAAFNWLKPCPWDRRLKQA-TDAFGISSFRPLQPHALNATLMARDVFAILPTGAGKSLIYQLAAVVDAGLTLVVSPLLSLSMDQRAALRGYHIRAECLHSEITKQQQKAIYSHFIPSDAFAASSKHPRKKWSREQPWCPDDVEPLVLFVTPEQVARSKRLLSRLEILYENGHLSRICIDEAHCCSSWGHDFRHDYRKLAILRRQCPSTPILALTATCDPNTVEDVCNVLEMKHPVIFRGSIDRPNLFYEVRQKADTDKVVIQDIASWLKTEFKGQCGIIYVLSRKEAHTYATQLAQLGTDTDCYHSDMDITHRNAVHRQWSDNKLQVVVATIAFGLGIDHPHVRFIIHATIATSLEAYYQESGRAGRDGLPAKCIVLQKPKDFARMSAFVADKGQSRIRKLYAMYEYACSRGLHSRHLCRRQLIAKAFGDTAPNRTQEQLATCCDLCAARCGAVESSVVSIDVSYIARDLLSMIELYVEQYPDKKTTILKFATDWGKNSKSKAQRSKSDRSSMAKLVDVNTRVEILVQLVLSGALQETHRHSSYSMQAYVTTNDVQAALRRRSIDVTLWKKDAER--LLAAKSYLKTERSDEGMEKLPGDDKELSMVD 677          
BLAST of Ggra6192.t1 vs. uniprot
Match: R7QC18 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC18_CHOCR)

HSP 1 Score: 583 bits (1504), Expect = 4.210e-196
Identity = 313/628 (49.84%), Postives = 412/628 (65.61%), Query Frame = 0
Query:   19 SVREKREQVSEAQRRLXXLCXXXXXXXXXXXXRLKLLRERADAAFDW-LHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNK----------TSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEFKNQCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGPVRLQKMYEMYKYACSRGLGS--GNL--CRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTIGEEDVITNLDRIEIALWKEN 631
            SV  +R  V E  R L                R+  LR  AD AFDW   A  W   L   L  V+ +++FRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVD G+T+VV+PLISLS+DQ+ AL    IRA+ L S   K     IYD  LP    NK          +  + R        W+ DD+   ++FVTPEQ+A++K+L+SRLE ++E GHLSRI +DEAHCCS+WGHDFR +YR+LGIL+ QCP+TP++ALSATC   T  DV   L + + VIFRG ++RPNLFYEVR K D + +VI DIA  +  EFK+QCGI+YVLSRK+AE Y+  L   GI + CYHGD+    R+ +H  W  G+  + VATIAFGLGID+  VRF+IHATMA+S++ YYQESGRAGR+G P+KCIVLH+ +DFAR+SAFV   G  R++K+Y+MY+Y   R +G   GN+  CRR +I  +F E  P R+  Q  SCCDLC A        L+ +DV+ LA+ +  ++R  +  YP +K T+L IAN W  +  R G+R +  +      +++  R+ I+  LVL GAL+E++RHSSYAVNAYV+IG  DV+   +R ++ L K++
Sbjct:  139 SVSSQRAVVRERHRLLTEATAELTELERRAAARIAHLRRAADLAFDWNAPAFPWAPILARELHGVYNIAAFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDRGVTVVVTPLISLSVDQKMALRRLRIRAESLDSTTEKSALATIYDVILPRPRPNKQKGSNKKXXNSMENRRKREKRKGSWVQDDMEASIVFVTPEQIAKNKKLMSRLELMYEGGHLSRIVIDEAHCCSTWGHDFRADYRRLGILKAQCPNTPLLALSATCCPETTADVCKTLGVPNAVIFRGSIDRPNLFYEVRKKKDDEESVISDIAEMLLGEFKDQCGIVYVLSRKEAEVYSETLNTMGIQSGCYHGDMSQDDRSAIHEDWQDGKCLVAVATIAFGLGIDNQMVRFVIHATMATSIDGYYQESGRAGRNGKPAKCIVLHRAKDFARLSAFVAANGDGRVRKLYDMYRYCSGRTIGEDVGNISKCRRAVIAAAFNETPPPRNECQQSSCCDLCAAGDERK---LELLDVSPLAESIVAVVRHMSTTYPNEKATLLNIANIWTNTGLR-GKRMRGREPPLDRRVSLEARLEILIGLVLEGALEEYYRHSSYAVNAYVSIGN-DVLCESNRFKVLLSKKD 761          
BLAST of Ggra6192.t1 vs. uniprot
Match: A0A5J4YR95 (ATP-dependent DNA helicase Q1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YR95_PORPP)

HSP 1 Score: 395 bits (1015), Expect = 2.620e-124
Identity = 235/578 (40.66%), Postives = 329/578 (56.92%), Query Frame = 0
Query:   56 RERA---DAAFDWLHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEFKNQCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGP--VRLQKMYEMYKYACSRGLGSGN----LCRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTIGEEDVITNLDRIE 624
            RERA    AA DWL    WDA        VF + SFRPLQREALNA L   DV A+LPTG GKSLI+QL   ++GG+ LVVSPLISL  DQ  +L+ R + A+ L S+  K     IY + L + A  +                    P ++L+VTPE++A+SK L+++L++    G L  I +DEAHCCS+WGHDFR +Y K+GILR Q P  PI+AL+AT  +R VE++  +L +   V+FRG  +RPNLFY V  K +  AA++ +IA  +   ++ Q GIIY  SRK++   A  LA  GI AA YH  +D + R+ V+  W SG+  +VVATIAFGLGID P VRF+IH TM+ SLE+YYQESGRAGRDG  + CIVL+   D  R+S  V +     V +   Y+M ++      G  +    LCRR ++   F  K    + E+C   CD+C  R     P + +VD T  AKDL  M+ +       +K T L   + W  + K +   A+RG +     +N      +   +++ G L EF  ++ Y++ +Y+  G +  +  L R+E
Sbjct:   43 RERARSFQAAVDWLAPREWDADCVRVAQKVFGIVSFRPLQREALNAFLAGNDVIAVLPTGLGKSLIFQLPFALNGGIVLVVSPLISLMEDQVLSLQARGLSAKLLCSDTVKHDVNRIY-AILAADAATQ--------------------PRLLLYVTPERLAKSKMLMNKLQRAFANGILRAIAIDEAHCCSTWGHDFRPDYTKVGILRSQFPGVPIVALTATASARVVEEIKQMLLIPSAVVFRGLFDRPNLFYSVCHKPNK-AAIVSEIAALIKRLYEGQSGIIYCFSRKESSLVAGELAALGIKAAPYHAQMDVAARSNVYRAWKSGKTQVVVATIAFGLGIDKPDVRFVIHHTMSKSLESYYQESGRAGRDGKEADCIVLYSLSDITRVSTMVAESPNRNVAIGLFYDMIRFCLGMTRGDASTRVALCRRRILGGLFSWKGGAFTHERC---CDVCSTRNLSGRPAIPAVDRTTEAKDLLHMVLQAH--EADEKVTCLSFLDAWSSTGKNAS--ARRGSEVPRCTLNRLEMELVTGSMLVQGVLAEFFYYTPYSIISYLIPGPKHSV--LSRLE 589          
BLAST of Ggra6192.t1 vs. uniprot
Match: D8SVA0 (ATP-dependent DNA helicase (Fragment) n=10 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SVA0_SELML)

HSP 1 Score: 387 bits (995), Expect = 6.690e-121
Identity = 221/556 (39.75%), Postives = 310/556 (55.76%), Query Frame = 0
Query:   64 DWLHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEF-KNQCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGPVRLQKMYEMYKYACSRGLGSGNLCRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKR------GQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTIG 612
            DW     WD    + L +VF +S+FR  QRE +NA +  ++V  ++  G GKSL YQL A++  G+ LVVSPL+SL  DQ   L    + A  L S  SK+ +K IY          K   + R                 +L+VTPE++A+SKR +S+LEK +  G LS + +DEAHCCS WGHDFR +Y+ LGIL++Q P  P+IAL+AT   R   D+  +L++     F   VNRPNLFYEVR K    A VI DIA ++   +  N+ GI+Y  SRK+ E+ A AL +  I AA YH D+D  +RT VH +WSS QL ++V T+AFG+GI+ P VRF+IH T++ SLE YYQESGRAGRDGLPS+C++  +P D  R S  V  +    LQ +Y M +Y  S+       CRR      F E++ E     C   CD C     ++       DVT+  K L + + + A     KKTT+LQ+ + W    +++G             +T    ++ +    II +L+L G L +  +H++YA NAYV  G
Sbjct:   54 DWSGNFEWDNEASNLLLNVFGISTFRRNQREIVNALMSNKNVVVVMAAGGGKSLCYQLPALLRPGIALVVSPLLSLIQDQVMGLAALGVSAAMLTSTTSKEEEKEIY------RVLEKGDGNLR-----------------ILYVTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKKQFPKVPMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVRDKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHRRWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLYFRPADVPRQSCMVFSEN-TGLQNLYAMARYCQSK-----QRCRRAAFFQYFAEQVQE-----CNGMCDTCAFENDVV-----EKDVTEYGKSLVQSVMDVA--ESDKKTTLLQLVDLWRSQLRQAGNHMSGVYGHILQSQTGDKEMSKDDAEQIILQLILDGTLAKDFQHTAYATNAYVKAG 568          
BLAST of Ggra6192.t1 vs. uniprot
Match: A0A0D2RB67 (ATP-dependent DNA helicase n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2RB67_GOSRA)

HSP 1 Score: 381 bits (979), Expect = 2.960e-120
Identity = 213/552 (38.59%), Postives = 308/552 (55.80%), Query Frame = 0
Query:   62 AFDWLHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEFKN-QCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGPVRLQKMYEMYKYACSRGLGSGNLCRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTIG 612
            A DW  +  WD++ +    +VF +SS+RP QRE +NA +  RDV  I+  G GKSL YQL A++  G+ LVVSPL+SL  DQ   L    I A+ L S  SK+ +K IY +        K                       +L+VTPE+V++SKR +S+LEK H  G LS I +DEAHCCS WGHDFR +Y+ LGIL+ Q P+ P++AL+AT   +   D+  +L +   V F   VNRPNLFY VR K+     V+ +IA ++   + N + GI+Y  SRK+ E+ A+ L E GI A  YH D+D + R +VH +WS  +L ++V T+AFG+GI+ P VRF+IH +++ S+E YYQESGRAGRDGLPS+C++  +  D  R S  V  +    LQ +Y+M +Y  S+       CRR      F E + E     C   CD C          ++ VD +  +K L  ++RE  +    ++ T+LQ+            +R K  QK     +       ++ +L+L   LKE  +H++YA N+YVT+G
Sbjct:   63 AEDWSRSFDWDSQAEDIRFNVFGISSYRPNQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAILRQGIALVVSPLLSLIQDQVMGLVASGIPARMLTSTTSKEDEKFIYKALEKGEEGLK-----------------------LLYVTPEKVSKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPVVALTATATMKVQNDLIEMLHIPKCVKFVSTVNRPNLFYMVREKSSVGKIVVDEIAKYIKESYPNKESGIVYCFSRKECEQVASELCERGISADYYHADMDVNAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLFFRSADMPRQSTMVFHENS-GLQNLYDMVQYCQSK-----RQCRRSAFFRHFAEPLQE-----CNGMCDNCA-----FSSEIKEVDASGHSKLLISLVRE--MQEKDQRVTMLQLV-----------DRVKNKQKQLDFELKREEMEQLVVQLILDRVLKEEFQHTAYATNSYVTVG 562          
BLAST of Ggra6192.t1 vs. uniprot
Match: A0A2R6WQN6 (ATP-dependent DNA helicase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WQN6_MARPO)

HSP 1 Score: 388 bits (996), Expect = 2.330e-119
Identity = 218/549 (39.71%), Postives = 314/549 (57.19%), Query Frame = 0
Query:   64 DWLHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEF-KNQCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGPVRLQKMYEMYKYACSRGLGSGNLCRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTI 611
            DW  +  WD R      +VF +S++R  QRE +NA +  R+V  I+  G GKSL YQL A++  G+ L+VSPL+SL  DQ   L+   I A  L S  +K+ +KAIY S        K +   R                 +L+VTPE++A+SKR +S+LEK ++ G LS + +DEAHCCS WGHDFR +Y+ LGIL++Q P  PIIAL+AT   R   DV  +L++ +   F   VNRPNLFYEVR K    +A I DIA ++   + + Q GI+Y  +RK+ E+ A  L + GI A+ YH D+   VR  +HT+WS  ++ ++V T+AFG+GI+ P VRF+IH +++ SLE YYQESGRAGRDGLPS C++  +P D  R S+ V  +    +  ++ +Y  A +R   S   CRRE     FGE + +     C   CD C          +  +DVT  AK +  ++++       +KTT+LQ+ + W     RS +   RG+      ++      +I +LVL G LKE   H++YA NAYVT+
Sbjct:   67 DWTGSFEWDKRAADLRLNVFGISTYRTNQREIINAVMSGRNVMVIMAAGGGKSLCYQLPALLRSGIALIVSPLLSLIQDQVMGLKALGIPAGMLTSTTTKEEEKAIYLSL------EKGTGGLR-----------------ILYVTPEKIAKSKRFMSKLEKCNKAGRLSLMAIDEAHCCSQWGHDFRPDYKNLGILKKQFPKVPIIALTATATERVQTDVREMLQIPYSERFTSSVNRPNLFYEVREKKSNASAAIDDIADFIRGGYTEKQSGIVYCFTRKECEQVAEELRQRGISASHYHADMAPDVRANIHTRWSGNKIQVIVGTVAFGMGINKPDVRFVIHHSLSKSLETYYQESGRAGRDGLPSHCVLFFRPADIPRQSSMVFSE----VAGLHNLY--AIARFCQSKRSCRREAFFRHFGEPVQD-----CNGMCDNCA-----YAKEITELDVTAHAKSIVTLLKDS----DNQKTTMLQLVDSWRS---RSRQTEARGEAALVKELSKEDVERVIIQLVLDGILKEEFAHTAYATNAYVTV 569          
BLAST of Ggra6192.t1 vs. uniprot
Match: mediator of RNA polymerase II transcription subunit 34 isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E4F5E1 (mediator of RNA polymerase II transcription subunit 34 isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E4F5E1)

HSP 1 Score: 382 bits (982), Expect = 6.210e-119
Identity = 218/550 (39.64%), Postives = 307/550 (55.82%), Query Frame = 0
Query:   64 DWLHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEF-KNQCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGPVRLQKMYEMYKYACSRGLGSGNLCRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTIG 612
            DW     WDA       ++F +SS+R  QRE +NA +  RDV  I+  G GKSL YQL A++  G+TL+VSPL+SL  DQ   L    I A  L S  SK  +K IY +                           D    +L+VTPE++++SKR +S+LEK H  G LS I +DEAHCCS WGHDFR +Y+ LGIL+ Q P  P+IAL+AT   +   D+  +L +   V F   VNRPNLFY+V  K      VI  IA ++ + +  N+ GI+Y  SRK+ E+ A  L EHGI A  YH D+D   R +VH +WS+ +L ++V T+AFG+GI+ P VRF+IH +++ S+E YYQESGRAGRDGLPS+CI+ +KP D  R S+ V  +    LQ +Y++ +Y  S+       CRR  I + FGE       + C   CD C    G +   L+ +DVT  AK +  M+R+  +    ++ T+LQ+ + +    K  G          +  +       ++  L+L   LKE  +H++YA NAYVTIG
Sbjct:   64 DWSGTFEWDALADDTRLNIFGISSYRANQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAILRDGITLIVSPLLSLIQDQVMGLMALGIPAYMLTSATSKDDEKFIYKALEKG-----------------------DGDLRMLYVTPEKISKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKIQFPHVPLIALTATATYKVQTDLLEMLHIPKCVKFTSTVNRPNLFYKVHEKVSVGKVVIDQIAEYIRSSYTNNESGIVYCFSRKECEQVAKELREHGISADYYHADMDVVAREKVHLRWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILYYKPTDVPRQSSMVFYENS-GLQNLYDIVRYCQSK-----KCCRRSAIFHHFGEP-----PQDCNGMCDNCA--YGTV---LKEIDVTGHAKTIVTMLRD--MQEHEQRATMLQLVDKFKAKMKEMG-----ASSNPTPDLKKEQLENLVIRLLLDRVLKEEFQHTAYATNAYVTIG 567          
BLAST of Ggra6192.t1 vs. uniprot
Match: A0A6I9TEA8 (ATP-dependent DNA helicase n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TEA8_SESIN)

HSP 1 Score: 382 bits (980), Expect = 1.070e-118
Identity = 216/549 (39.34%), Postives = 306/549 (55.74%), Query Frame = 0
Query:   65 WLHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEF-KNQCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGPVRLQKMYEMYKYACSRGLGSGNLCRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTIG 612
            W     WDA       +VF +SS+R  QRE +NA +  RDV  I+  G GKSL YQL AV+  G+ LVVSPL+SL  DQ   L    IRA  L S  +K+ +K IY +        K                       +L+VTPE++++SKR +S+LEK H  G LS I +DEAHCCS WGHDFR +YR LGIL+ Q P  P++AL+AT   +  ED+  +L +   + F   VNRPNLFY VR K+    +VI  IA ++ T +  N+ GI+Y  SRK+ E+ A  L E GI A  YH D+D   R +VH +WSSG+L ++V T+AFG+GI+ P VRF++H +++ S+E YYQESGRAGRDGLPS+C++  +P D +R S+ V  +    LQ +Y++ +Y  S+       CRR      F E + +     C   CD C +        ++  DV+  AK +  M++E  +    ++ TILQ+            ++ K   K     +       +I +LV+   LKE  +HS+YA NAYVT+G
Sbjct:   67 WSGPFEWDAEADDVRFNVFGISSYRANQREIINAIMSGRDVLVIMAAGGGKSLCYQLPAVLRKGVALVVSPLLSLIQDQVMGLAALGIRACMLTSTTNKEDEKFIYKALEKGEGELK-----------------------ILYVTPEKISKSKRFMSKLEKCHHGGRLSLISIDEAHCCSQWGHDFRPDYRNLGILKTQFPDVPVVALTATATKKVQEDLMDMLHIPKCIRFVSSVNRPNLFYMVREKSSVGKSVIDGIAEYIQTSYPNNESGIVYCFSRKECEQVAKDLRERGISADYYHADMDVHAREKVHMRWSSGKLQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPADVSRQSSMVFFENS-GLQNLYDIVRYCLSK-----QQCRRGAFFRHFAEPLQD-----CNGMCDNCSS-----YDEIKEFDVSGHAKLIVSMLQE--MQENDQRVTILQLV-----------DKMKSRNKDLDPELKKEDLELLIVQLVVDHVLKEEFQHSAYATNAYVTVG 563          
BLAST of Ggra6192.t1 vs. uniprot
Match: A0A2H9ZRR7 (ATP-dependent DNA helicase n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZRR7_9ASPA)

HSP 1 Score: 381 bits (978), Expect = 2.000e-118
Identity = 218/550 (39.64%), Postives = 307/550 (55.82%), Query Frame = 0
Query:   64 DWLHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEFKN-QCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGPVRLQKMYEMYKYACSRGLGSGNLCRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTIG 612
            DW     WDAR      +VF ++S+R  QRE +NA +  RDV  I+  G GKSL YQL AV+  G+ LVVSPL+SL  DQ   L    I A  L S  SK  +K IY +                           DV   +L+VTPE++++SKR +S+LEK H+ G LS I +DEAHCCS WGHDFR +Y+ LGIL+ Q P  P+IAL+AT   +   D+  +L +   + F   VNRPNLFY+V  K+     VI  IA ++ + + N + GI+Y  SRK+ E+ A  L EHGI A  YH D+D + R +VH +WS   L ++V T+AFG+GI+ P VRF+IH +++ S+E YYQESGRAGRDGLPS+C++ +KP D  R S+ V  +    LQ +Y++ +Y  S+       CRR      FGE + +     C   CD C     L     + V+VTD AK +  ++R    L   ++ T+LQ+ +      K  G         ++  +       +I +L+L   LKE  +H++YA NAYVT+G
Sbjct:   64 DWSGTFEWDARAYDITFNVFGITSYRANQREIINALMSGRDVLVIMAAGGGKSLCYQLPAVLLDGIALVVSPLLSLIQDQVMGLSALGIPACMLTSTTSKDDEKFIYKALEKG-----------------------DVELKILYVTPEKISKSKRFMSKLEKCHKAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKIQFPQVPLIALTATATYKVQIDLMEMLHIPKCIKFETTVNRPNLFYKVHVKSPISKVVINQIADYIVSSYSNMESGIVYCFSRKECEQVARELQEHGISADYYHADMDIAAREKVHLRWSRNNLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYYKPSDVPRQSSMVFYENS-GLQNLYDIVRYCQSKS------CRRSAFFLHFGEPLQD-----CNDMCDNCAYGAKL-----EEVNVTDHAKAILSVLRSMQDL--DQRATVLQLVDKLKVKMKALGA-------PSTPELKKEHLEQLIIQLLLDRVLKEEFQHTAYATNAYVTLG 564          
BLAST of Ggra6192.t1 vs. uniprot
Match: A0A1U8BJL2 (ATP-dependent DNA helicase n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8BJL2_NELNU)

HSP 1 Score: 380 bits (975), Expect = 5.560e-118
Identity = 217/550 (39.45%), Postives = 307/550 (55.82%), Query Frame = 0
Query:   64 DWLHACAWDARLQHALSDVFALSSFRPLQREALNATLMARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHRSIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDDVPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDFRLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGVNRPNLFYEVRPKADTDAAVIVDIATWVSTEF-KNQCGIIYVLSRKDAEKYAAALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHPHVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVGDKGPVRLQKMYEMYKYACSRGLGSGNLCRRELIVNSFGEKMPERSAEQCKSCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQIANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRHSSYAVNAYVTIG 612
            +W     WD+       +VF +S++R  QRE +NA +  RDV  I+  G GKSL YQL A++  G+ LVVSPL+SL  DQ   L    I A  L S  SK+ +K IY                RA      E         +L+VTPE+V++SKR +S+LEK H  G LS I +DEAHCCS WGHDFR +Y+ LGIL+ Q PS P++AL+AT   +   D+  +L +   + F   VNRPNLFY VR K+     V+ +IA ++ + +  N+ GI+Y  SRK+ E+ A  L + GI A  YH D+D   R +VH +WSS +L ++V T+AFG+GI+ P VRF+IH +++ S+E YYQESGRAGRDGLPS+C++ ++P D  R S+ V  +    LQ +Y+M +Y C    G    CRR    + F E + +     C   CD C          L  VDVT  AK +  +++E  +    ++ T+LQ+ +      K SG   K+ +              +I +L+L   LKE  +H+ YA NAYVTIG
Sbjct:   64 NWSGPFGWDSEADDIRFNVFGISTYRANQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAILRDGVALVVSPLLSLIQDQVMGLSALGIPAYMLTSTTSKEDEKFIY----------------RALEKGEGEL-------KILYVTPEKVSKSKRFMSKLEKCHHGGRLSLIAIDEAHCCSQWGHDFRPDYKNLGILKTQFPSVPVVALTATATKKVQADLMEMLHISKCIKFVSTVNRPNLFYMVRDKSSVGKVVVDEIADFIRSSYPNNESGIVYCFSRKECEQVAEELCQRGISAGFYHADMDVGAREKVHLRWSSNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLYYRPGDVPRQSSMVFYEN-AGLQNLYDMVRY-CQSKRG----CRRSAFFHHFAEPLQD-----CNGMCDNCA-----FGTELNEVDVTRQAKAIVSLLQE--IQEKDQRATMLQLVDKVKVKYKESGSDLKKEETEQ-----------LIIQLILDRVLKEEFQHTPYATNAYVTIG 561          
The following BLAST results are available for this feature:
BLAST of Ggra6192.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZ408.890e-28463.83ATP-dependent DNA helicase n=1 Tax=Gracilariopsis ... [more]
R7QC184.210e-19649.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YR952.620e-12440.66ATP-dependent DNA helicase Q1 n=1 Tax=Porphyridium... [more]
D8SVA06.690e-12139.75ATP-dependent DNA helicase (Fragment) n=10 Tax=Sel... [more]
A0A0D2RB672.960e-12038.59ATP-dependent DNA helicase n=1 Tax=Gossypium raimo... [more]
A0A2R6WQN62.330e-11939.71ATP-dependent DNA helicase n=2 Tax=Marchantia poly... [more]
mediator of RNA polymerase II transcription subunit 34 isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E4F5E16.210e-11939.64mediator of RNA polymerase II transcription subuni... [more]
A0A6I9TEA81.070e-11839.34ATP-dependent DNA helicase n=2 Tax=Sesamum indicum... [more]
A0A2H9ZRR72.000e-11839.64ATP-dependent DNA helicase n=1 Tax=Apostasia shenz... [more]
A0A1U8BJL25.560e-11839.45ATP-dependent DNA helicase n=1 Tax=Nelumbo nucifer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 674..703
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 667..739
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR13710:SF72ATP-DEPENDENT DNA HELICASE Q1coord: 21..710
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 21..710
NoneNo IPR availableCDDcd18794SF2_C_RecQcoord: 302..436
e-value: 2.50535E-57
score: 189.342
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 84..310
e-value: 7.8E-23
score: 91.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 96..294
score: 20.606647
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 347..428
e-value: 5.7E-20
score: 82.3
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 332..427
e-value: 1.3E-14
score: 54.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 319..483
score: 17.002068
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 302..509
e-value: 7.6E-58
score: 197.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 56..301
e-value: 1.5E-73
score: 248.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 126..443
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 90..283
e-value: 6.2E-12
score: 45.6
IPR004589DNA helicase, ATP-dependent, RecQ typeTIGRFAMTIGR00614TIGR00614coord: 79..535
e-value: 4.9E-128
score: 425.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 517..627
e-value: 1.6E-8
score: 36.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:933244..935463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6192.t1Ggra6192.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 933244..935463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6192.t1 ID=Ggra6192.t1|Name=Ggra6192.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=740bp
MATDALPQRDELARELGDSVREKREQVSEAQRRLSELCAQLADAQRALSE
RLKLLRERADAAFDWLHACAWDARLQHALSDVFALSSFRPLQREALNATL
MARDVFAILPTGAGKSLIYQLAAVVDGGLTLVVSPLISLSMDQRSALEHR
SIRAQCLHSELSKKRQKAIYDSFLPSHAFNKTSNHPRANNTHSSEWINDD
VPPMVLFVTPEQVARSKRLLSRLEKLHEKGHLSRICVDEAHCCSSWGHDF
RLEYRKLGILRRQCPSTPIIALSATCDSRTVEDVTSVLEMQHPVIFRGGV
NRPNLFYEVRPKADTDAAVIVDIATWVSTEFKNQCGIIYVLSRKDAEKYA
AALAEHGIDAACYHGDLDFSVRTQVHTQWSSGQLNIVVATIAFGLGIDHP
HVRFIIHATMASSLEAYYQESGRAGRDGLPSKCIVLHKPRDFARMSAFVG
DKGPVRLQKMYEMYKYACSRGLGSGNLCRRELIVNSFGEKMPERSAEQCK
SCCDLCEARLGLMVPTLQSVDVTDLAKDLFKMIREFALLYPGKKTTILQI
ANDWGKSTKRSGERAKRGQKTASSAINVNTRVAIINELVLCGALKEFHRH
SSYAVNAYVTIGEEDVITNLDRIEIALWKENEARASLFAAKVRRTEMKEA
KAESSHVDDCEVILIEDSDEEQQDQNQDLKSERTVVESVKTEAKTEIFKH
DGSPSDIETNPNPPCDSPFAAEAKQLNSPPKKKQRRTLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR004589DNA_helicase_ATP-dep_RecQ
IPR036388WH-like_DNA-bd_sf