Ggra6193.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6193.t1
Unique NameGgra6193.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length593
Homology
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BLAST of Ggra6193.t1 vs. uniprot
Match: A0A0D9NJ18 (MYND-type zinc finger protein samB n=1 Tax=Metarhizium anisopliae BRIP 53293 TaxID=1291518 RepID=A0A0D9NJ18_METAN)

HSP 1 Score: 58.5 bits (140), Expect = 3.240e-6
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 0 
Query:  333 EAREEGHLKLV--------GQ-CQLCSNCGKREQ----QPRLLLRCGRCRVAWYCDRTCQRGDWAAHKKVCGKNPNIRP 398
            + +++G++ LV        GQ  ++CS CG+REQ    +PR+L RCGRC+  +YC++ CQ  DW  HK  C +   + P
Sbjct:  116 QVKKQGYVMLVAVETVLNRGQWAEVCSGCGRREQLDDEEPRML-RCGRCKERYYCNKECQTEDWPNHKGDCKRLRKVSP 193
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BLAST of Ggra6193.t1 vs. uniprot
Match: A0A0D2E4X7 (MYND-type zinc finger protein samB n=1 Tax=Exophiala xenobiotica TaxID=348802 RepID=A0A0D2E4X7_9EURO)

HSP 1 Score: 58.2 bits (139), Expect = 7.180e-6
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0 
Query:  349 CSNCGKREQQ--PRLLLRCGRCRVAWYCDRTCQRGDWAAHKKVCGKN 393
            C  CG+  Q   PR L++CGRC+ AWYC++ CQR +W  HK +C K+
Sbjct:  165 CFYCGRINQDLHPRSLMKCGRCKGAWYCNQECQRANWKNHKLICRKD 211
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BLAST of Ggra6193.t1 vs. uniprot
Match: A0A218Z726 (MYND-type zinc finger protein samB n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218Z726_9HELO)

HSP 1 Score: 57.8 bits (138), Expect = 9.300e-6
Identity = 25/45 (55.56%), Postives = 29/45 (64.44%), Query Frame = 0 
Query:  349 CSNCGKREQQ-PRLLLRCGRCRVAWYCDRTCQRGDWAAHKKVCGK 392
            C+ C K E Q P  L RC +C  A YC R CQ+ DW AHK+VCGK
Sbjct:   36 CATCFKPESQLPTSLKRCAKCHTAQYCSRDCQKEDWKAHKRVCGK 80
The following BLAST results are available for this feature:
BLAST of Ggra6193.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0D9NJ183.240e-637.97MYND-type zinc finger protein samB n=1 Tax=Metarhi... [more]
A0A0D2E4X77.180e-648.94MYND-type zinc finger protein samB n=1 Tax=Exophia... [more]
A0A218Z7269.300e-655.56MYND-type zinc finger protein samB n=1 Tax=Marsson... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 349..390
e-value: 1.2E-10
score: 41.3
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 349..390
score: 12.475519
NoneNo IPR availableGENE3D6.10.140.2220coord: 348..399
e-value: 5.1E-14
score: 53.7
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 345..393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:937006..938921 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6193.t1Ggra6193.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 937006..938921 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6193.t1 ID=Ggra6193.t1|Name=Ggra6193.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=593bp
MSIVPCYQLAVGREHLFTTHYTYVAVPDNVPPPEMTRLMLRDDAPMPTPR
FTGNVLALEQLQQRIQQQPHDIIVERRTSTYRFNIHPGASGARERLDAVY
NHSFVIYPCPEQCGEDAFEVRFGSPKSHRLSYERFPDWGEKELDCYIERA
VVLGHAHRLTTERLAEEDPLAFWAFLLRYRTYFPRLARASADQKWKKELM
LEVRAANRLGTGEFDEHGIMHTGRAIPAFKTWLDVLTTDNRQDHAETGFV
AAMSIAMKMGKNMPGSAVEREGAGIIMEMSENMRNSNIARAVCLAQQNGE
MMRDAGGDVDARRRAETLFSEKFGELFGEDMSEAREEGHLKLVGQCQLCS
NCGKREQQPRLLLRCGRCRVAWYCDRTCQRGDWAAHKKVCGKNPNIRPEP
SAVRAVVFPGDPAVKPYATWIRGRTYDDHRRYVANSVLKCEVNDIKRTAA
ALGVVQRGGDEDGKIVMLHAGSGRVNARACAVAERATLPSLQMTTFSIGR
LAKVRGNAVLVKVRRGSRSCHQQSMGDFSMQNYLDRWGVFSYLAPEDEDG
TSGDGGAHGDRKSFGFAVPIQTSPERVAGVMTVMRDAMRTMQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND