Ggra6115.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6115.t1
Unique NameGgra6115.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length361
Homology
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BLAST of Ggra6115.t1 vs. uniprot
Match: A0A2V3IJ21 (C2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ21_9FLOR)

HSP 1 Score: 471 bits (1213), Expect = 5.000e-164
Identity = 228/361 (63.16%), Postives = 287/361 (79.50%), Query Frame = 0 
Query:    1 MKHVELFLSASTSSEQTDRKARTFAVVFTQHGFENEFEQLGRTETISHSDNLHYCTSFQVPYNGRFPDETVLRFELYHRRTEEIEKLTEHTQLGKATLSLPDLLLAPGNHLTTQLSHPSLEKKVGVLTVSAEKVQMDSAESQSDVLFDLSTSVLRRKDWNKTLLHQRYELKRAHRHTDMEGHTVWLPIYRSDRIGKQRDSNTTIEFTTANVKYRHLCNGDDERQLKICLYATAPTCKRNTSEVLLGSVTFCLRDICELDPTEEVLSLESNVEGSEDAGHVAIVKAEPTDYGSHFSLHVNYENTVKYSIGGSQDRRKPMQKGKKRLSMS-RLSIG-RGKSSPGGAKLPAINSIENLFKHQPT 359
            MK +ELFLS  T +  T++  RTFAV+F + G + +F +LGRTET+  SD+ HYCTSF+VPYN R  DET+LR E+Y R+TE+ E+L +H    KAT+S+PD+L+APGNHLTTQLSHPSLEKKVGVLT+SAE+V  D AE+ SDVL D+S  VLRR+DWNKT+L QRYEL RAH H DMEGHTVWLPI++SDRIGKQRDSNTTIEF+T +VKYRHLCNGDDER+++I +Y+T  + KR  +E L+G   F LRDICELDPTEEVL LE   +  E+ GHV+IVKAEPTDYGSHFSLHVNYENT +Y I GS+++RK ++K KKRLS++ RLS+  + KS+P   ++  +  ++NLF HQPT
Sbjct:    1 MKLIELFLSCDTLAHLTEKPLRTFAVLFKKDGHDRDFTELGRTETVCQSDSPHYCTSFEVPYNQRAADETILRVEIYQRKTEQTERLKDHDFFAKATISMPDVLMAPGNHLTTQLSHPSLEKKVGVLTLSAEQVDADRAENNSDVLIDMSACVLRRRDWNKTILCQRYELHRAHNHEDMEGHTVWLPIHKSDRIGKQRDSNTTIEFSTVSVKYRHLCNGDDERRMRISMYSTPQSNKRPCTEALIGLAIFTLRDICELDPTEEVLQLERIGDDCEELGHVSIVKAEPTDYGSHFSLHVNYENTSRYCIAGSEEKRKQVKKMKKRLSITKRLSLSSKDKSNPASTRICDLGGVDNLFTHQPT 361
The following BLAST results are available for this feature:
BLAST of Ggra6115.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJ215.000e-16463.16C2 domain-containing protein n=1 Tax=Gracilariopsi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 9..145
e-value: 8.2E-6
score: 27.7
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 25..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..348
NoneNo IPR availablePANTHERPTHR10857:SF106COPINE-8coord: 3..286
IPR045052CopinePANTHERPTHR10857COPINEcoord: 3..286
IPR000008C2 domainPROSITEPS50004C2coord: 1..113
score: 9.285421

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:590114..591196 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6115.t1Ggra6115.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 590114..591196 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6115.t1 ID=Ggra6115.t1|Name=Ggra6115.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=361bp
MKHVELFLSASTSSEQTDRKARTFAVVFTQHGFENEFEQLGRTETISHSD
NLHYCTSFQVPYNGRFPDETVLRFELYHRRTEEIEKLTEHTQLGKATLSL
PDLLLAPGNHLTTQLSHPSLEKKVGVLTVSAEKVQMDSAESQSDVLFDLS
TSVLRRKDWNKTLLHQRYELKRAHRHTDMEGHTVWLPIYRSDRIGKQRDS
NTTIEFTTANVKYRHLCNGDDERQLKICLYATAPTCKRNTSEVLLGSVTF
CLRDICELDPTEEVLSLESNVEGSEDAGHVAIVKAEPTDYGSHFSLHVNY
ENTVKYSIGGSQDRRKPMQKGKKRLSMSRLSIGRGKSSPGGAKLPAINSI
ENLFKHQPTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR045052Copine
IPR000008C2_dom