Ggra8410.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8410.t1
Unique NameGgra8410.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length156
Homology
BLAST of Ggra8410.t1 vs. uniprot
Match: A0A2V3IKM4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKM4_9FLOR)

HSP 1 Score: 192 bits (488), Expect = 2.870e-60
Identity = 101/156 (64.74%), Postives = 124/156 (79.49%), Query Frame = 0
Query:    1 MKHCVQAFLAPAPI--ARSSFQNKAVSQTVPTSYVRRTTHVPPHPTVIRLTPTALDSLVLTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQDSEAEGIRL 154
            M+HC+ AF++ +PI   R S +N  VS + P  ++ R    P      R+ P AL  LVLTE++VNQALDEVKVKLGSIFGNS ENR+VGITGDV L++LDGPVVVLRLQGRFWHKR+DVLARVSAYL+ERIPEICD++IE+++QL+DSEAE  RL
Sbjct:    1 MEHCLSAFVSSSPINSLRPSHRNSPVSVSKPVPFIPRRRSTPCR-IAPRIVPKALHPLVLTEESVNQALDEVKVKLGSIFGNSQENRDVGITGDVALSSLDGPVVVLRLQGRFWHKRTDVLARVSAYLLERIPEICDIEIEDQRQLEDSEAESTRL 155          
BLAST of Ggra8410.t1 vs. uniprot
Match: A0A7S3EC75 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EC75_9RHOD)

HSP 1 Score: 134 bits (336), Expect = 2.720e-37
Identity = 66/99 (66.67%), Postives = 80/99 (80.81%), Query Frame = 0
Query:   58 LTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQDSE--AEGIRL 154
            L+E+N+N  L+E K++LG++FGNS ENREVGITGDV LA LDG  VVLRL GRFWHKRSDV+ARVS YL  RIPE+CDV IE+E QL D++   E +RL
Sbjct:   50 LSEENINIVLEEAKIELGTLFGNSEENREVGITGDVSLAELDGVTVVLRLTGRFWHKRSDVVARVSQYLQNRIPEVCDVMIEDESQLDDADEKVEKLRL 148          
BLAST of Ggra8410.t1 vs. uniprot
Match: L1JDA8 (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JDA8_GUITC)

HSP 1 Score: 119 bits (298), Expect = 2.780e-31
Identity = 61/105 (58.10%), Postives = 74/105 (70.48%), Query Frame = 0
Query:   50 PTALDSLVLTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQDSEAEGIRL 154
            P   + L LTE NV QAL+E K  LG++FGNS ENRE+GITGDV L  LDGP   +RL GRFWHKRSDVLARV  Y+  R+PEI +V IE+  QL D+  E  ++
Sbjct:   65 PMDKEPLDLTEDNVQQALEESKEILGTMFGNSQENREIGITGDVQLVNLDGPFASVRLVGRFWHKRSDVLARVENYVKTRVPEIVEVSIEDPMQLDDNLPENQKM 169          
BLAST of Ggra8410.t1 vs. uniprot
Match: A0A7S0DXW5 (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DXW5_9CRYP)

HSP 1 Score: 119 bits (298), Expect = 3.770e-31
Identity = 60/98 (61.22%), Postives = 71/98 (72.45%), Query Frame = 0
Query:   50 PTALDSLVLTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQDS 147
            P   + L LTE+NV  AL+E K  LG++FGNS ENRE+GITGDV L  LDGP   +RL GRFWHKR+DVLARV  YL  RIPEI +V IE+  QL D+
Sbjct:   76 PMDKEPLDLTEENVQNALEEAKEILGTMFGNSQENREIGITGDVKLINLDGPFATVRLVGRFWHKRADVLARVENYLKTRIPEIIEVSIEDPMQLDDN 173          
BLAST of Ggra8410.t1 vs. uniprot
Match: A0A0G4GKJ3 (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GKJ3_VITBC)

HSP 1 Score: 113 bits (282), Expect = 7.180e-29
Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 0
Query:   54 DSLVLTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQDS 147
            D L+LTE+NV + L+  + +L ++FGNS ENR VGITGDV  A LDGP+V+LRL+GRFWH R+ VL RV+A+L+ RIPE   V+IE+   L D+
Sbjct:   74 DQLILTEENVEKTLEACRQELSALFGNSEENRSVGITGDVEFAGLDGPLVILRLKGRFWHSRATVLERVTAFLLNRIPECLGVEIEDPAMLDDN 167          
BLAST of Ggra8410.t1 vs. uniprot
Match: R7QDY0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDY0_CHOCR)

HSP 1 Score: 110 bits (274), Expect = 8.050e-28
Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 0
Query:   54 DSLVLTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAY 125
            D+LVLTE+NV QAL+EV+VKLGS+FGNS ENR VGITGDV L+ LDGP+VVL L+GRFWHKR+DV++R   Y
Sbjct:   73 DTLVLTEENVVQALNEVRVKLGSVFGNSAENRGVGITGDVSLSELDGPIVVLSLKGRFWHKRADVVSRFLPY 144          
BLAST of Ggra8410.t1 vs. uniprot
Match: A0A1X6P4M3 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4M3_PORUM)

HSP 1 Score: 105 bits (261), Expect = 1.270e-26
Identity = 50/89 (56.18%), Postives = 65/89 (73.03%), Query Frame = 0
Query:   58 LTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQD 146
            L+  +V   L EV+  LG++FG+S ENR++GITGDV L  +DGP V LRL GRFWHKR+DV++RV+ YL  RIPEI DV +E   QL +
Sbjct:    3 LSPASVEAGLVEVREVLGTMFGSSAENRDIGITGDVSLVDVDGPFVTLRLSGRFWHKRTDVMSRVATYLQSRIPEIADVTVEHPDQLDE 91          
BLAST of Ggra8410.t1 vs. uniprot
Match: D7G2J7 (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2J7_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.690e-26
Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 0
Query:   52 ALDSLVLTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQDSE 148
            A ++L+LTE+NV   L E K +L ++FGN+ EN  VGITGD     LDGP VV+RL GRFWH+++ VLARV  ++  RIPE  DV+IE+  QL+D++
Sbjct:    2 AQETLILTEENVVAVLAEAKRELSTLFGNNAENTAVGITGDCEFVCLDGPSVVVRLTGRFWHEKTTVLARVGNFVQTRIPECVDVEIEDPSQLEDAD 98          
BLAST of Ggra8410.t1 vs. uniprot
Match: A0A803ME64 (Uncharacterized protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803ME64_CHEQI)

HSP 1 Score: 105 bits (262), Expect = 4.760e-26
Identity = 53/98 (54.08%), Postives = 72/98 (73.47%), Query Frame = 0
Query:   52 ALDSLVLTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQDSEA 149
            A+  L +TE+N+ + LD+ +V+L  +F     +REVGITG V LA LDGP V +RL+G+FWHKRS V+AR+  YL +RIPEI +V IE+E+QL DS A
Sbjct:   59 AMQPLDMTEENIEKVLDDARVELAQLF-----DREVGITGQVELAELDGPFVKIRLRGKFWHKRSTVVARLENYLKQRIPEILEVDIEDEKQLDDSPA 151          
BLAST of Ggra8410.t1 vs. uniprot
Match: D7TDC3 (Uncharacterized protein n=5 Tax=Vitis TaxID=3603 RepID=D7TDC3_VITVI)

HSP 1 Score: 103 bits (257), Expect = 1.080e-25
Identity = 56/96 (58.33%), Postives = 68/96 (70.83%), Query Frame = 0
Query:   52 ALDSLVLTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDGPVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQDS 147
            +L  L LTE NV Q L + +V+L  IF NS     VGITG+  LA LDGP V + L+GRFWHKRS VLARV+ YL +RIPEI +V IE+E+QL DS
Sbjct:   26 SLSPLDLTEDNVRQVLADARVELAQIFDNS-----VGITGEAELAELDGPFVKISLRGRFWHKRSTVLARVANYLKQRIPEILEVDIEDEKQLDDS 116          
The following BLAST results are available for this feature:
BLAST of Ggra8410.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKM42.870e-6064.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S3EC752.720e-3766.67Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
L1JDA82.780e-3158.10Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0DXW53.770e-3161.22Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A0G4GKJ37.180e-2956.38Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
R7QDY08.050e-2872.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6P4M31.270e-2656.18Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
D7G2J72.690e-2652.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A803ME644.760e-2654.08Uncharacterized protein n=2 Tax=Chenopodium quinoa... [more]
D7TDC31.080e-2558.33Uncharacterized protein n=5 Tax=Vitis TaxID=3603 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034904Fe-S cluster assembly domain superfamilyGENE3D3.30.300.130coord: 55..139
e-value: 1.2E-12
score: 49.8
IPR034904Fe-S cluster assembly domain superfamilySUPERFAMILY117916Fe-S cluster assembly (FSCA) domain-likecoord: 91..138
NoneNo IPR availablePANTHERPTHR36018OS09G0481800 PROTEINcoord: 34..149
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:494787..495372 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8410.t1Ggra8410.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 494787..495372 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8410.t1 ID=Ggra8410.t1|Name=Ggra8410.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=156bp
MKHCVQAFLAPAPIARSSFQNKAVSQTVPTSYVRRTTHVPPHPTVIRLTP
TALDSLVLTEQNVNQALDEVKVKLGSIFGNSHENREVGITGDVVLATLDG
PVVVLRLQGRFWHKRSDVLARVSAYLMERIPEICDVQIEEEQQLQDSEAE
GIRLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034904FSCA_dom_sf