Ggra8414.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8414.t1
Unique NameGgra8414.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length609
Homology
BLAST of Ggra8414.t1 vs. uniprot
Match: A0A2V3IFC8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFC8_9FLOR)

HSP 1 Score: 745 bits (1924), Expect = 4.280e-264
Identity = 368/600 (61.33%), Postives = 468/600 (78.00%), Query Frame = 0
Query:    8 FEGVDAILDENIEKELRSYVSAGGNLTEACETLSQSYDGLPDMIRLLIEWIDSYGNGIQALEKAFQTVLTANEANIIPKLDDSLAKPGAKEFLATIVSSSRWSPVVSEMALRHKKSLLYDMLMREKRLKDADLSLSTVSSEQVFVKALQEQFSKFFESSACQTDVSLQALFERVTALCSYDEHTLVVGTRFLCYMSRNASQQLTTGVYTRVGEEVRKAVVERATTTTSVSEQEKRHELFRMFAMIDAAVAGAAVSRTVVDALVSILVCEGGKRSYSKEIETLVGVYGFLLGDIGASDMIPDGNSNSVVNATLDFSVKEKTFCIELLCHMEIVEGIMNATFSHYHRSYATERVPDIDRRKCLVLLLTYIDMFRTMPEQDIRAVLDNSSLRESFRNNLKSGTERINIVVAACEACPPGTPWFKIRRGHAKTLVQSVSNPLMAYGVYMWACEGLKGSSD-ARALIMTAPKHLAFLQAVAETHVQLRPKILDAVHEAFVRDYDGLDITQIEDMRDMYVKYIISLARIQMAPEVVDAFFDKWAGDERIDQAHLRRFVSGLLDTISLPFTKELEEKFARLVGHTRVNSALDGETKNRISRLQSALR 606
            F+  DAI ++N+   L ++V AGG L +ACE+L QSY+G P M+RL+ EWID YG+G   LE AFQT + ANEAN+I +L+++LAKPGAKE LA +VSS RWS +VS++A+RHK S L++ML+REKRLKDA L L  V+S   F+  ++EQFS FF S+A   D S++ L+ER++A+C+YDEHTL+VG R+LC +SR + Q   +G+Y R+GEEVR+ +V      TSVSEQEK+HE+FRMF +IDAA AG  + R++VDALV+++V  G  RS  +++  LV VYGF+ GDI  S +I DG+   +++ T D S  EK F IE LCH E+++ +MNATFSHYHRSY+ E+VPD  +R+C+VLLL YI+MFRTMPE  I +VLD   LRESFRNNLK+  ER + + AACEACPPGTPW+KI++GHAKTLV +V +PLMA  VYMWA EGLKG+ +  RAL  TAP+HLAFLQAVAE H+QLRP+ILDAVHEAFVRDY GLDITQIEDMRD Y+KYII+LARIQM PEVVDAF+  WAGDER+D+AHLRRF+SGLLDTIS+PF++EL  K +RLV H RV +ALD ETK RISRLQ A R
Sbjct:   12 FDADDAIFEDNLIDMLTTHVQAGGALFDACESLHQSYEGFPQMLRLVTEWIDIYGDGTNILESAFQTSILANEANMISRLNEALAKPGAKEILAQVVSSDRWSAIVSQIAMRHKGSNLHNMLIREKRLKDAGLDLDVVASADNFILGMEEQFSAFFSSAAVAKDKSVRHLWERISAMCAYDEHTLIVGLRYLCSLSRRSGQIAISGLYKRIGEEVRQRIVLNGVAGTSVSEQEKKHEIFRMFILIDAAAAGVTIRRSLVDALVNVMVSGGTIRSSEQDVRILVEVYGFIFGDIDMSGIIQDGDK--IMDGTADLSTAEKVFLIETLCHKEVLDDLMNATFSHYHRSYSKEKVPDTAKRRCMVLLLAYIEMFRTMPESSIHSVLDTPPLRESFRNNLKAIVERFDSIAAACEACPPGTPWYKIKKGHAKTLVDAVGDPLMASAVYMWAREGLKGTEENVRALEKTAPRHLAFLQAVAEVHLQLRPRILDAVHEAFVRDYPGLDITQIEDMRDNYIKYIIALARIQMTPEVVDAFYTNWAGDERVDKAHLRRFISGLLDTISIPFSEELWGKVSRLVRHERVEAALDNETKQRISRLQEAGR 609          
BLAST of Ggra8414.t1 vs. uniprot
Match: R7Q5S7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5S7_CHOCR)

HSP 1 Score: 422 bits (1086), Expect = 1.570e-136
Identity = 229/591 (38.75%), Postives = 351/591 (59.39%), Query Frame = 0
Query:    8 FEGVDAILDENIEKELRSYVSAGGNLTEACETLSQSYDGLPDMIRLLIEWIDSYGNGIQALEKAFQTVLTANEANIIPKLDDSLAKPGAK-EFLATIVSSSRWSPVVSEMALRHKKSLLYDMLMREKRLKDADLSLSTVSSEQVFVKALQEQFSKFFESSACQTDVSLQALFERVTALCSYDEHTLVVGTRFLCYMSRNASQQLTTGVYTRVGEEVRKAVVERATTTTSVSEQEKRHELFRMFAMIDAAVAGAAVSRTVVDALVSILVCEGG-----KRSYSKEIETLVGVYGFLLGDIGASDMIPDGNSNSVVNATLDF--SVKEKTFCIELLCHMEIVEGIMNATFSHYHRSYATERVPDIDRRKCLVLLLTYIDMFRTMPEQDIRAVLDNSSLRESFRNNLKSGTERINIVVAACEACPPGTPWFKIRRGHAKTLVQSVSNPLMAYGVYMWACEGLKGSSDARALIMTAPKHLAFLQAVAETHVQLRPKILDAVHEAFVRDYDGLDITQIEDMRDMYVKYIISLARIQMAPEVVDAFFDKWAGDERIDQAHLRRFVSGLLDTISLPFTKELEEKFARLVGHTRVNSAL 590
            F+  DAIL ++++ +L ++++   +  +A E L +SY+G+PDMIR L+EW D Y +G   LE+A +TVL  +E  IIP+LD++LA        + T+  S RW+PVV  MA R+K+S L+++L RE RL  A ++   + +   FV A+ EQF+K F      +D  L  L+ RV+ALC+YDE + +V  R    ++ +A      G+Y RVG+EVRK  V   T    +SE   R  + R+  + D   +  ++ + +VDAL+++    GG     +R +  E + L  VYG L+GDI   +   D     VV    +F  SV +K   I +LCH+E+ E I+ A FSH +R+Y  +  PDI +R CL +LL Y  +F    ++++  +L++   +E  RN +K+    I  V   CE+  PG P FKIR    + L++   +PL+A GV MWA EGL+G S+ R L++TAP HLAFL+A+AE H  L+ ++L+ + EAF+RDY  LD+ ++E +RD + K I  L RIQMAP++V  F   WA ++R+D AHLR F++GLL  IS PF++        L+ + RV SA+
Sbjct:   84 FDAFDAILSDDVDHQLSTFLNTHDDPRDATERLMESYEGVPDMIRALVEWSDIYADGTANLEQAVETVLLEHEQTIIPRLDEALATTEKSLPVVTTVTESKRWNPVVCSMAARNKESTLHNLLTRESRLSQAGINQEVLQTPASFVDAITEQFTKLFSPDKQVSDDELLGLYNRVSALCTYDECSTIVSLRMFNKLAHDADTPFMRGLYRRVGQEVRKEAVRVMTAANIMSEHMARQYVIRLAFITDCVESNVSMRKAIVDALLNLF---GGTDRSIRRRFETETKILRSVYGCLIGDIEIKEADSD-----VVETVQEFQGSVADKVVLIRMLCHVEVFEDILKALFSHKYRTYL-DGEPDISKRTCLCMLLAYSGVFICKDDKELPTMLEDEVAKEKLRNEMKTTFTEIRRVAEVCESLKPGCPRFKIRGPPVQVLLEGTKSPLIARGVLMWAKEGLEGGSNLRELLVTAPTHLAFLEAIAEKHPVLQGEVLEIIREAFMRDYPELDVIEVEKLRDKFTKTITGLVRIQMAPQIVRMFQGSWANNKRVDLAHLRHFINGLLQIISPPFSRTFAASVMELLNNERVASAI 665          
The following BLAST results are available for this feature:
BLAST of Ggra8414.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IFC84.280e-26461.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5S71.570e-13638.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006942TH1 proteinPFAMPF04858TH1coord: 7..596
e-value: 4.0E-32
score: 111.6
IPR006942TH1 proteinPANTHERPTHR12144NEGATIVE ELONGATION FACTOR Dcoord: 4..592

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:504989..506815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8414.t1Ggra8414.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 504989..506815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8414.t1 ID=Ggra8414.t1|Name=Ggra8414.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=609bp
MSTSLNFFEGVDAILDENIEKELRSYVSAGGNLTEACETLSQSYDGLPDM
IRLLIEWIDSYGNGIQALEKAFQTVLTANEANIIPKLDDSLAKPGAKEFL
ATIVSSSRWSPVVSEMALRHKKSLLYDMLMREKRLKDADLSLSTVSSEQV
FVKALQEQFSKFFESSACQTDVSLQALFERVTALCSYDEHTLVVGTRFLC
YMSRNASQQLTTGVYTRVGEEVRKAVVERATTTTSVSEQEKRHELFRMFA
MIDAAVAGAAVSRTVVDALVSILVCEGGKRSYSKEIETLVGVYGFLLGDI
GASDMIPDGNSNSVVNATLDFSVKEKTFCIELLCHMEIVEGIMNATFSHY
HRSYATERVPDIDRRKCLVLLLTYIDMFRTMPEQDIRAVLDNSSLRESFR
NNLKSGTERINIVVAACEACPPGTPWFKIRRGHAKTLVQSVSNPLMAYGV
YMWACEGLKGSSDARALIMTAPKHLAFLQAVAETHVQLRPKILDAVHEAF
VRDYDGLDITQIEDMRDMYVKYIISLARIQMAPEVVDAFFDKWAGDERID
QAHLRRFVSGLLDTISLPFTKELEEKFARLVGHTRVNSALDGETKNRISR
LQSALRAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006942TH1