Ggra2003.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2003.t1
Unique NameGgra2003.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length452
Homology
BLAST of Ggra2003.t1 vs. uniprot
Match: A0A2V3J792 (Myb-related protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J792_9FLOR)

HSP 1 Score: 510 bits (1313), Expect = 7.260e-176
Identity = 285/486 (58.64%), Postives = 344/486 (70.78%), Query Frame = 0
Query:    1 MGRSENDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRKIRPDGSGLISTPSCSSRRG------------------------SLRDNKRSGLQLWRSSQRHTSDNAKARRSRTGAPKSDGHRSPRSTIHRISTPSRRKVHKSEDSSDKPEDKKPSAVYETPAQNPR-FPVIVLGSSLNVLSPQPLALKQEGTSLAGSESYSSVTDPHSPSAGTSSQFYGYLDETANLSSTDTALVTNSSGTPNISNGFVPELEPEQDFATNIPTSARRR-----------LSTEVDERSDGRPSHKRQKSDTVCTVEDDPIPPFLFESAIGDYGLETIPLADLGFAFSLADSDPISVNHSCLHSVGIGEDERMNEMGLGPFDDVSEEIRDHADNEEFSNIYSSASLNYPSLIASINPIANPDYG 450
            MGRSENDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRKIRPDGSGLI+TP+ ++RR                         SLR++KR+   LW+ + R  +D  + RR+     +SD HRS  ST+ ++STPSR    KS+D   + +D + SA  +   ++   F   +LGS LN+L+ QP+AL+Q  T L  S+++++VTD  SPS   SS      +E+AN S TDTALV +S GTP+ SN     L+ +QD   N P+S  R+           L     ER  GR ++KRQKSDTV ++E+D IPPFLFES + DYGL+  PLADLGFAFSLA+ DPISVNHS LH V I ED  + EMGL P DDV+ ++ DH  N++F+ IY+SA+LNYPSLIAS+NPIA PDYG
Sbjct:    1 MGRSENDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRKIRPDGSGLITTPTSNNRRSAASASTSDRTSISSQSHISKTRQNSLRESKRT-FHLWKPASRSGNDGLRMRRNVLS--RSDNHRSLTSTLRKLSTPSRSVASKSDDRPAQNDDPQSSAACQAALKSTTTFATSLLGSPLNLLASQPVALQQPQTPLVLSDTHTAVTDSCSPSQLVSSHLCLQPEESANFS-TDTALVADSVGTPSTSNVASSVLDTQQDCVVNTPSSCTRQEXXXXXXXXXELEQGEQERRGGRSANKRQKSDTVTSLEEDLIPPFLFESTMSDYGLDNAPLADLGFAFSLAEGDPISVNHSSLHPVDIVEDGPIKEMGLSPIDDVNIDMPDHLINDDFAGIYNSANLNYPSLIASVNPIAPPDYG 482          
BLAST of Ggra2003.t1 vs. uniprot
Match: S0F364 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F364_CHOCR)

HSP 1 Score: 258 bits (660), Expect = 2.070e-77
Identity = 193/503 (38.37%), Postives = 261/503 (51.89%), Query Frame = 0
Query:    1 MGRS-ENDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRKIRPDGSGLISTPSCSSRRGSLRDNKRSGLQLWRSSQRHTSDNAKARRSRTGAPKSDGHRSPRSTIHRISTPSRRKVHK---SEDSSDKPEDKK-PSAVYETPAQNPRFPVI---VLGS-----------SLNVLSPQPLALKQ-EGTSLAGSESYSSVTDPH---------SPSAGTSSQFYGYLDETANLSSTDTALVTNSSGTPNISNGFVPELEPEQDFATNI--------------PTSARRRLSTEVDERSDGRPSHKRQKSDTVCTVEDDPIPPFLFESAIGDYGLETIPLADLGF---AFSLADSDPISVNHSCLHSVGIGEDERM--NEMGLGPFDDVSEEIRDHA----DNEEFSNIYSSASLNYPSLIASINPIANPDYGF 451
            MGRS +ND++ARGPWTKDED+MLISLVNAHGPRNWT+LA+RM SRSGKQCRERWLNHLNP+IKKGAW+  EDE LV LH+T GNRWSEIA+HLPGRTDNAIKNHWNSTIKRKIRPDG GL+  P+      S R +  S   + ++++ HTS++ K   S T  P  D         H +S+    +  K   S + + +   K+   A+ +   +   F  +   V G            +++ LS   L  K+    S   SE Y   TD           S     S +    L E  +  + +    T + G   +      + + E +  T +              P+ +RRR   + D  +  R  HKR KS+   +    P+PPFLF     D+G++  PL + G     +      PI  ++  L  V     +    +    G     SE+I DH     D +   N+YS+ +LNYPSL+ SINP+A PDYGF
Sbjct:    1 MGRSSDNDSFARGPWTKDEDAMLISLVNAHGPRNWTSLATRMTSRSGKQCRERWLNHLNPDIKKGAWSVAEDETLVDLHRTHGNRWSEIARHLPGRTDNAIKNHWNSTIKRKIRPDGRGLMHVPTNRKTTLSERTSATSHSDVTKAAE-HTSNSVKDTHSPTSNPWKD----VMYDTHNVSSSKASRHGKDYLSRNITLRGTSKRYVGAIADHETKRGSFASLSSAVTGGMFIQDSKDKHDAMDELSRNRLLSKRTHKQSHPQSELYVERTDIELQELSSVFSSGGRAVSPRNIDALPENGSFGADEKPHSTTADGDDLVQYDQETDYDIESESPTTVLFGCPDQLKSTTESPSFSRRRRLNDADSPTH-RSLHKRHKSEPSVSPNCGPLPPFLFGLGSNDFGIDEPPLPEFGVILPGYEDVGILPIPGHNEDLSVVNHASSDAAASDAAAFGNSTSASEDI-DHQLPCDDLDAMVNVYSTDNLNYPSLMPSINPVAPPDYGF 496          
BLAST of Ggra2003.t1 vs. uniprot
Match: A0A0L8FYY5 (Uncharacterized protein (Fragment) n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8FYY5_OCTBM)

HSP 1 Score: 162 bits (410), Expect = 5.950e-44
Identity = 69/118 (58.47%), Postives = 87/118 (73.73%), Query Frame = 0
Query:    6 NDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRKIRPDGSGLISTP 123
            N    +GPWTK+ED  ++ LVN +GP+ WT+++ ++  R+GKQCRERW NHLNP IKK AWT +ED  +  LHKT GNRW+EIAK+LPGRTDNAIKNHWNST+K+K         S P
Sbjct:   40 NPELVKGPWTKEEDEKVLQLVNVYGPKRWTHISKQLKGRTGKQCRERWHNHLNPAIKKTAWTEEEDSIIYRLHKTHGNRWAEIAKNLPGRTDNAIKNHWNSTMKKKYESIDDQKSSCP 157          
BLAST of Ggra2003.t1 vs. uniprot
Match: V4AEU1 (Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AEU1_LOTGI)

HSP 1 Score: 159 bits (403), Expect = 9.210e-44
Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 0
Query:    6 NDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRK 111
            N    +GPWTK+ED  ++ LV  +GP+ WT ++  +  R+GKQCRERW NHLNP+IKK AWT  ED  +  LHKT GNRW+EIAK+LPGRTDNAIKNHWNST+KRK
Sbjct:   41 NPDLIKGPWTKEEDDKVVELVVTYGPKRWTLISKHLRGRTGKQCRERWHNHLNPDIKKTAWTEQEDNLIYHLHKTFGNRWAEIAKYLPGRTDNAIKNHWNSTMKRK 146          
BLAST of Ggra2003.t1 vs. uniprot
Match: A0A5J4Z547 (Transcriptional activator Myb n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z547_PORPP)

HSP 1 Score: 167 bits (424), Expect = 1.320e-43
Identity = 70/110 (63.64%), Postives = 88/110 (80.00%), Query Frame = 0
Query:    1 MGRSENDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKR 110
            + + ++    +GPWTK+ED  LI LVNA GP+NWT LA ++  RSGKQCRERWLNHLNP+IKK AW+ +ED K+  LH+ +GNRW+EIAK LPGRTDNAIKN WNST+K+
Sbjct:   44 LNKDQSAPLVKGPWTKEEDQTLIELVNAEGPKNWTKLAMKLTKRSGKQCRERWLNHLNPDIKKDAWSPEEDAKMYLLHQEMGNRWAEIAKELPGRTDNAIKNRWNSTVKK 153          
BLAST of Ggra2003.t1 vs. uniprot
Match: A0A7S1EQJ0 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQJ0_9RHOD)

HSP 1 Score: 165 bits (417), Expect = 1.610e-43
Identity = 71/104 (68.27%), Postives = 85/104 (81.73%), Query Frame = 0
Query:    7 DTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKR 110
            D + +GPWTK+ED  L+ LV+  G RNWT LAS++  RSGKQCRERWLNHLNP+IKK AW+ DED+ L  LH+ +GNRW+EIAK LPGRTDNAIKN WNS+IKR
Sbjct:   35 DNFVKGPWTKEEDEELMRLVHKEGARNWTKLASKLVRRSGKQCRERWLNHLNPDIKKEAWSKDEDQTLFRLHEQLGNRWAEIAKELPGRTDNAIKNRWNSSIKR 138          
BLAST of Ggra2003.t1 vs. uniprot
Match: T1EI44 (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EI44_HELRO)

HSP 1 Score: 159 bits (401), Expect = 2.050e-43
Identity = 65/110 (59.09%), Postives = 84/110 (76.36%), Query Frame = 0
Query:    6 NDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRKIRPD 115
            N    +G WTK+ED  ++ LV+ HGP+ WT ++  +  R+GKQCRERW NHLNP IKK AWT +ED+ +  LH+ +GNRW++IAK+LPGRTDNAIKNHWNSTI+RK   D
Sbjct:   41 NPDLIKGSWTKEEDKKVLELVSEHGPKRWTIISKYIKGRTGKQCRERWHNHLNPEIKKTAWTEEEDQMIYELHQNLGNRWAKIAKYLPGRTDNAIKNHWNSTIRRKFESD 150          
BLAST of Ggra2003.t1 vs. uniprot
Match: C4V6R4 (Uncharacterized protein n=2 Tax=Nosema ceranae TaxID=40302 RepID=C4V6R4_NOSCE)

HSP 1 Score: 159 bits (403), Expect = 3.800e-43
Identity = 68/116 (58.62%), Postives = 92/116 (79.31%), Query Frame = 0
Query:    1 MGRSENDT-YARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRKIRPD 115
            +G S N++   +GPWTK+ED  L++L+N + P+NW+ ++ +M +R GKQCRERW NHLNP I K  ++ +ED K+V LHK  GNRWSEIAKHLPGRTDNAIKN+WNSTI+R+++ D
Sbjct:    2 LGSSANESKIIKGPWTKEEDQKLLNLINKYSPKNWSFISKKMETRLGKQCRERWHNHLNPKICKKPFSDEEDLKIVELHKKYGNRWSEIAKHLPGRTDNAIKNYWNSTIQRRVQKD 117          
BLAST of Ggra2003.t1 vs. uniprot
Match: A0A433SUY0 (Uncharacterized protein (Fragment) n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A433SUY0_ELYCH)

HSP 1 Score: 157 bits (398), Expect = 4.850e-43
Identity = 64/106 (60.38%), Postives = 85/106 (80.19%), Query Frame = 0
Query:    6 NDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRK 111
            N    +GPWT++ ++ +I LVN +GP+ WT ++  +  R+GKQCRERW NHLNP+IKK AWT +ED+ +  LH+ +GNRW+EIAK+LPGRTDNAIKNHWNST+KRK
Sbjct:   40 NPDLIKGPWTREANNRVIQLVNEYGPKRWTLISKHLKGRTGKQCRERWHNHLNPSIKKTAWTEEEDQLIYQLHRRLGNRWAEIAKYLPGRTDNAIKNHWNSTMKRK 145          
BLAST of Ggra2003.t1 vs. uniprot
Match: A0A1R2B4U6 (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B4U6_9CILI)

HSP 1 Score: 162 bits (409), Expect = 5.780e-43
Identity = 66/108 (61.11%), Postives = 87/108 (80.56%), Query Frame = 0
Query:    6 NDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCRERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAIKNHWNSTIKRKIR 113
            N T  +GPWT +ED M+I LV  +GP +W+ +A+++P R GKQCRERW NHLNPNIK+  W ++ED K+++ H  +GN+W+EIAK LPGRTDNAIKNHWNST+KRKI+
Sbjct:   73 NPTIIKGPWTSEEDEMVIKLVQTYGPHHWSIIANKLPGRIGKQCRERWHNHLNPNIKQDEWNAEEDIKIINAHIQLGNKWAEIAKLLPGRTDNAIKNHWNSTLKRKIK 180          
The following BLAST results are available for this feature:
BLAST of Ggra2003.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J7927.260e-17658.64Myb-related protein A n=1 Tax=Gracilariopsis chord... [more]
S0F3642.070e-7738.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0L8FYY55.950e-4458.47Uncharacterized protein (Fragment) n=2 Tax=Octopus... [more]
V4AEU19.210e-4463.21Uncharacterized protein (Fragment) n=1 Tax=Lottia ... [more]
A0A5J4Z5471.320e-4363.64Transcriptional activator Myb n=1 Tax=Porphyridium... [more]
A0A7S1EQJ01.610e-4368.27Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
T1EI442.050e-4359.09Uncharacterized protein n=1 Tax=Helobdella robusta... [more]
C4V6R43.800e-4358.62Uncharacterized protein n=2 Tax=Nosema ceranae Tax... [more]
A0A433SUY04.850e-4360.38Uncharacterized protein (Fragment) n=1 Tax=Elysia ... [more]
A0A1R2B4U65.780e-4361.11Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 10..59
e-value: 3.1E-18
score: 76.6
coord: 62..110
e-value: 1.2E-17
score: 74.6
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 6..57
score: 12.705374
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 58..108
score: 12.345389
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 65..105
e-value: 6.82902E-14
score: 63.7486
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 13..57
e-value: 1.49117E-16
score: 71.0674
NoneNo IPR availableGENE3D1.10.10.60coord: 11..62
e-value: 1.3E-23
score: 84.6
NoneNo IPR availableGENE3D1.10.10.60coord: 64..138
e-value: 1.4E-22
score: 81.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 150..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..337
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..337
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 8..303
NoneNo IPR availablePANTHERPTHR45614:SF88TRANSCRIPTION FACTOR MYB119-RELATEDcoord: 8..303
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 63..106
e-value: 1.2E-16
score: 60.7
coord: 11..57
e-value: 1.5E-16
score: 60.3
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 58..112
score: 29.180592
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 6..57
score: 20.615093
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 10..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000925_piloncontigtig00000925_pilon:123387..124907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2003.t1Ggra2003.t1Gracilaria gracilis GNS1m malemRNAtig00000925_pilon 123387..124907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2003.t1 ID=Ggra2003.t1|Name=Ggra2003.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=452bp
MGRSENDTYARGPWTKDEDSMLISLVNAHGPRNWTNLASRMPSRSGKQCR
ERWLNHLNPNIKKGAWTSDEDEKLVSLHKTIGNRWSEIAKHLPGRTDNAI
KNHWNSTIKRKIRPDGSGLISTPSCSSRRGSLRDNKRSGLQLWRSSQRHT
SDNAKARRSRTGAPKSDGHRSPRSTIHRISTPSRRKVHKSEDSSDKPEDK
KPSAVYETPAQNPRFPVIVLGSSLNVLSPQPLALKQEGTSLAGSESYSSV
TDPHSPSAGTSSQFYGYLDETANLSSTDTALVTNSSGTPNISNGFVPELE
PEQDFATNIPTSARRRLSTEVDERSDGRPSHKRQKSDTVCTVEDDPIPPF
LFESAIGDYGLETIPLADLGFAFSLADSDPISVNHSCLHSVGIGEDERMN
EMGLGPFDDVSEEIRDHADNEEFSNIYSSASLNYPSLIASINPIANPDYG
F*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf