Ggra2012.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra2012.t1
Unique NameGgra2012.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length402
Homology
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BLAST of Ggra2012.t1 vs. uniprot
Match: A0A2V3INH1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INH1_9FLOR)

HSP 1 Score: 60.8 bits (146), Expect = 2.760e-7
Identity = 36/114 (31.58%), Postives = 62/114 (54.39%), Query Frame = 0 
Query:  112 VSKRRRFRFKEQHDVAMLQTVLHTRAHVAPHGQALRLFEDATALLFERGALADVTDGPLPTAKTVWDRFRHLVHTHRGRALGASAGRGQLFR--ERAALLDAIVSDVDREREQR 223
            ++K++R RF E  D  +L+ V  + AHVAPHG+  + FE A  L  +    + + +   P   T+ DRF  +V   R    G +A  G + +  +R  LLD ++  +D+E+E++
Sbjct:   42 LAKKKRIRFPEAWDPLLLKAVTASDAHVAPHGETGKRFEQALKLFLDAAPSSQLVNITHPVPLTLRDRFTTIVEKRRVEVRGTAAASGIVEKRGQREELLDDVILAMDKEQERK 155
The following BLAST results are available for this feature:
BLAST of Ggra2012.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INH12.760e-731.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 326..346
NoneNo IPR availableCOILSCoilCoilcoord: 209..233
NoneNo IPR availableCOILSCoilCoilcoord: 370..390
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000925_piloncontigtig00000925_pilon:140862..142067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra2012.t1Ggra2012.t1Gracilaria gracilis GNS1m malemRNAtig00000925_pilon 140862..142067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra2012.t1 ID=Ggra2012.t1|Name=Ggra2012.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=402bp
MGEPQDDRPFVAANLYRTDVFHTALYDAPPPLPPPLTPSPSCSQPPPAPP
PPQPPPLPPSQPLAAPPQPLAAPRVDAVAGRERLSPLSEAVCAAEGSRAR
SAAATASVGARVSKRRRFRFKEQHDVAMLQTVLHTRAHVAPHGQALRLFE
DATALLFERGALADVTDGPLPTAKTVWDRFRHLVHTHRGRALGASAGRGQ
LFRERAALLDAIVSDVDREREQREEHQQRLQQQHFVIRQQCVQGALLSPS
ASGSASAKRAAIGLSGRVVRRKIMAHGALSTSEQVVSGVDGAEALNESNE
DVHAASSGAEGAALTQEALCESRGDVERLRLELELRRMEADEKERRRRFE
IEQRFVNIEERRTAVEVRRLQMEEDERKNARQERQLLTSLLTTLANGLLN
K*
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