Ggra8408.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8408.t1
Unique Name	Ggra8408.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	291

Homology

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BLAST of Ggra8408.t1 vs. uniprot
Match: A0A2V3IND0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IND0_9FLOR)

HSP 1 Score: 282 bits (721), Expect = 1.600e-91
Identity = 149/289 (51.56%), Postives = 212/289 (73.36%), Query Frame = 0

Query:    1 MIDEQAVISAERSVEAVTWLRNLLTTQVSAEEATRQTASLQATPTAIQTIEAVRKVVEHRQAQQRQTNKALDALAKQYDSVLQQWEDGGASILRDVLDPDALSETHKLADVCTALKLEPERALSRVHQMSALSRLAEQYLAVDHRHTQRKFALGTAQQAVRDAVDELRNAIAVLQRVSDEVQTQEREKGAMSEREQALRQDIDKYGAQRKEAEDEVGRTGLQAQFTHAKIAQDGERLRQVEHKLEVVKLQLEKYHGMPADMDICGEMVSGMKKQIDEIDREIEEAINSM 289
            + DE+AVISA+R++EA+TWLR  +T   SAEEA RQ  ++Q  PT IQ+IEA+RKVV+ R+ Q  +T +A+  L KQY+ + +QW+DGG +++RD+LDPDAL ET  LADV  ALKL+ E +LS+  Q++ALSRLAE+Y+  + R  +R++A+G A +A+RD ++ELRNA+  L  V  +V+  E     + E  +A+++++      R  A +EV + G++A   H  IA+DGERLR++E KLE +KL+LEKYHG+PADM+ICGEMVSGMK Q+ EID+EIEEAI SM
Sbjct:    2 IFDEEAVISADRALEAITWLRERITRHCSAEEAGRQMWNVQTKPTTIQSIEAIRKVVQEREKQHEETTRAIQTLTKQYEWLCKQWQDGGGNVIRDMLDPDALCETDTLADVFAALKLDAEHSLSKSAQVTALSRLAEEYVGAEDRRVEREYAVGQAHEAIRDGMEELRNAVQTLDGVQRDVRKGEVASERLLENTRAMQEEVRNCEEARVVASEEVEKCGVEAGVRHETIAKDGERLRELEQKLEAIKLELEKYHGLPADMEICGEMVSGMKAQVGEIDKEIEEAIASM 290

The following BLAST results are available for this feature:

BLAST of Ggra8408.t1 vs. uniprot

BLAST of Ggra8408.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IND0	1.600e-91	51.56	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 268..288
None	No IPR available	COILS	Coil	Coil	coord: 164..215
None	No IPR available	SUPERFAMILY	57997	Tropomyosin	coord: 113..284

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000041_pilon	contig	tig00000041_pilon:491819..492778 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8408.t1	Ggra8408.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000041_pilon 491819..492778 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8408.t1 ID=Ggra8408.t1|Name=Ggra8408.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=291bp
MIDEQAVISAERSVEAVTWLRNLLTTQVSAEEATRQTASLQATPTAIQTI
EAVRKVVEHRQAQQRQTNKALDALAKQYDSVLQQWEDGGASILRDVLDPD
ALSETHKLADVCTALKLEPERALSRVHQMSALSRLAEQYLAVDHRHTQRK
FALGTAQQAVRDAVDELRNAIAVLQRVSDEVQTQEREKGAMSEREQALRQ
DIDKYGAQRKEAEDEVGRTGLQAQFTHAKIAQDGERLRQVEHKLEVVKLQ
LEKYHGMPADMDICGEMVSGMKKQIDEIDREIEEAINSMN*