Ggra6408.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6408.t1
Unique NameGgra6408.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length586
Homology
BLAST of Ggra6408.t1 vs. uniprot
Match: A0A2V3ISX1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISX1_9FLOR)

HSP 1 Score: 425 bits (1092), Expect = 9.010e-141
Identity = 223/453 (49.23%), Postives = 307/453 (67.77%), Query Frame = 0
Query:   26 SQHSTEYL-YLGTMEDFRIKRGKVRARDARE--GNIRKVDVKRLSEIHGSGCSEWAERTEM-RFRMRKTAKNWTTLFLSEGIVLQGHYECANLLRASSCISSNPIIVEADAFFPYCSEYDRRVNGYKVGQVQDARNVTVVHLSERTSRQLTLEAGEVYLIGGLYDPQPY--CHVCRKSHDIEISPCAAALRFMPLPSHAHFKKQIYDRERPGARVLTLIPGKTTELSCYEADDELCRDCHDKAVRNGAMWLKMDGSCPDKRCPMFEWCECWDENEPDSGLCVHYVYVKECKYNNLPDEPLATAIATGLIKVVTGSIEPYLQRWTSGELRRVARKLFKQGKKVTLEELLEQYSMEFNGSTLRKSEVMALAMRDVKLADIIDGYNSYTLSKINGFVENTEMMEVGPWLTGRLVTDCDGVWWQTGRSEPVLVSTEGDVSTVWKASMASMRESDDLG 472
            S  S E+L YLGT+E+FRIKR  VRA  A++  G + +V ++R+S+I  S    W   + + RFRMRKTAK+WT  F+S+ I+LQG YECANLLR SS  SSNP++ EAD +FPYCS  +R V+G+ V +V    N+T VHLS R S ++TL+A  VYLIG + +      C++C   HD+  SPC +   F+PLPSHAH K +IYDR R GARVLT I G+ + L+C    ++LC  C  +AVR+G  W KMDG+C D  CP  E C+C +E    S  C HY+Y+ + K NN+ D+ LA A+A G ++V+TG++E   +R  S  +R++A K  K G +++++ L+  +S     S L K EVMA+AM D +LAD+IDG+ S+TL+ +NGFV N E  EVGPWL GRLV D +G+WWQT RSEP+LVST   +STV KAS++S++ SD+LG
Sbjct:   11 SLESDEHLLYLGTLEEFRIKRKHVRATRAKQPGGGVEQVKIRRMSDIDVSSEENWLRSSNLQRFRMRKTAKDWTAFFMSQDILLQGPYECANLLRNSS--SSNPLLFEADRYFPYCSTSERVVHGHVVAEVPMI-NLTKVHLSSRRSHRITLKAQCVYLIGKVEEEAQSKPCYLCWTKHDLNDSPCPSISIFVPLPSHAHLKTRIYDRVRCGARVLTKIAGQNSTLACSSGREDLCTSCLARAVRSGCTWFKMDGTCNDWYCPNDERCDCVEE----SDSCSHYIYIPDAKRNNIVDDDLAVAVAEGKVRVLTGALESEWRRKMSYTVRKLAMKALKSGAEISVDSLVRTFSAI--DSKLSKCEVMAMAMYDTRLADLIDGHKSFTLNDVNGFVRNAEATEVGPWLAGRLVRDAEGIWWQTARSEPLLVSTRDAISTVSKASVSSLQTSDELG 454          
BLAST of Ggra6408.t1 vs. uniprot
Match: A0A2V3J1S4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1S4_9FLOR)

HSP 1 Score: 140 bits (354), Expect = 8.570e-32
Identity = 68/115 (59.13%), Postives = 84/115 (73.04%), Query Frame = 0
Query:  471 LGWVELGNFRCIEHFLRLSTWSLPQIAVEKWIKSPPILSGVGATLSELIHSPGYRMYRTQLFYEAHIGVILSKMNAQFREKNADS--AHYFANGGQVYRQHLTDAAAVTSSRASI 583
            +GWVE GNF C   FLR   W+ P++ +++WI +PPI SGVG+TLSELIHS G+RMYRTQ  + AHIGV LSKMNAQFRE+NA +    YFA+G   Y Q L  AA VT+S AS+
Sbjct:  275 IGWVESGNFLCTHSFLRFMNWTFPRVGIQRWINNPPISSGVGSTLSELIHSSGHRMYRTQESFVAHIGVTLSKMNAQFRERNAPALLTKYFADGDHAYHQLLAQAATVTASIASL 389          
BLAST of Ggra6408.t1 vs. uniprot
Match: R7QQI2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQI2_CHOCR)

HSP 1 Score: 127 bits (318), Expect = 4.390e-27
Identity = 62/114 (54.39%), Postives = 80/114 (70.18%), Query Frame = 0
Query:  471 LGWVELGNFRCIEHFLRLSTWSLPQIAVEKWIKSPPILSGVGATLSELIHSPGYRMYRTQLFYEAHIGVILSKMNAQFREKNADS--AHYFANGGQVYRQHLTDAAAVTSSRAS 582
            +GWVE GNF C E FLR   WS P++ V++WI +P I SGVGAT SE+I+S G+RM+RTQ  + AH+GV +SKMNA+FR+KN  +    YFA+G   Y   L +AA VT S AS
Sbjct:  317 IGWVESGNFLCTEDFLRFMNWSFPRVPVKRWIDNPTISSGVGATFSEIIYSAGFRMFRTQKSFVAHVGVAMSKMNAEFRQKNVGALFTKYFADGDDSYGALLAEAATVTVSIAS 430          
BLAST of Ggra6408.t1 vs. uniprot
Match: A0A1X6PBU3 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBU3_PORUM)

HSP 1 Score: 90.9 bits (224), Expect = 2.160e-15
Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 0
Query:  470 DLGWVELGNFRCIEHFLRLSTWSLPQIAVEKWIKSPPILSGVGATLSELIHSPGYRMYRTQLFYEAHIGVILSKMNAQFREKNADSAHY---FANGGQVYRQHLTDAAAVTSSRASIAR 585
            ++GWVE GNF     FL    WS  +I   +W+++PPI SGVGA LS  +H   +R+YRT     AH+   +S+MNA FR  +AD+ H    FA+G   Y   L    +VT+S AS  R
Sbjct:  384 EVGWVESGNFMTTARFLDEFRWSFRRIDPSRWVRNPPISSGVGAELSTFLHRRRWRLYRTHGSLLAHVSPAVSQMNAPFRSGSADATHRTLRFADGQAAYDALLRRTPSVTASMASTYR 502          
BLAST of Ggra6408.t1 vs. uniprot
Match: M2XHM9 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XHM9_GALSU)

HSP 1 Score: 70.5 bits (171), Expect = 4.580e-9
Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 0
Query:  464 SMRESDDL----GWVELGNFRCIEHFLRLSTWSLPQIAVEKWIKSPPILSGVGATLSELIHSPGYRMYRTQLFYEAHIGVILSKMNAQFREKNADSAHYFANGGQVYRQHLTDAAAVTSSRAS 582
            S R+ D++    GWVE  NF C   FL    +S+P +   +W +     SGVG TLS L+H  GY MYRT      H     SKM+   R++     + F +G  V  +   + A VT S  S
Sbjct:  214 SSRQMDNIVVLSGWVESSNFLCERRFLEWINFSVPTVNPSRWYRRKYASSGVGETLSNLLHREGYNMYRTSYSLLYHTRAHESKMHPVIRKEEILETYAFIDGQIVSSRMELECATVTCSMVS 336          
The following BLAST results are available for this feature:
BLAST of Ggra6408.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3ISX19.010e-14149.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1S48.570e-3259.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQI24.390e-2754.39Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6PBU32.160e-1542.02Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
M2XHM94.580e-934.96Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000918_piloncontigtig00000918_pilon:90478..92471 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6408.t1Ggra6408.t1Gracilaria gracilis GNS1m malemRNAtig00000918_pilon 90478..92471 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6408.t1 ID=Ggra6408.t1|Name=Ggra6408.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=586bp
MAKRLLCMVSGDKIPCQVHKRVLFYSQHSTEYLYLGTMEDFRIKRGKVRA
RDAREGNIRKVDVKRLSEIHGSGCSEWAERTEMRFRMRKTAKNWTTLFLS
EGIVLQGHYECANLLRASSCISSNPIIVEADAFFPYCSEYDRRVNGYKVG
QVQDARNVTVVHLSERTSRQLTLEAGEVYLIGGLYDPQPYCHVCRKSHDI
EISPCAAALRFMPLPSHAHFKKQIYDRERPGARVLTLIPGKTTELSCYEA
DDELCRDCHDKAVRNGAMWLKMDGSCPDKRCPMFEWCECWDENEPDSGLC
VHYVYVKECKYNNLPDEPLATAIATGLIKVVTGSIEPYLQRWTSGELRRV
ARKLFKQGKKVTLEELLEQYSMEFNGSTLRKSEVMALAMRDVKLADIIDG
YNSYTLSKINGFVENTEMMEVGPWLTGRLVTDCDGVWWQTGRSEPVLVST
EGDVSTVWKASMASMRESDDLGWVELGNFRCIEHFLRLSTWSLPQIAVEK
WIKSPPILSGVGATLSELIHSPGYRMYRTQLFYEAHIGVILSKMNAQFRE
KNADSAHYFANGGQVYRQHLTDAAAVTSSRASIAR*
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