Ggra3417.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3417.t1
Unique NameGgra3417.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length523
Homology
BLAST of Ggra3417.t1 vs. uniprot
Match: A0A2V3IRT9 (U3 small nucleolar RNA-associated protein 15-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRT9_9FLOR)

HSP 1 Score: 738 bits (1906), Expect = 3.600e-264
Identity = 360/520 (69.23%), Postives = 422/520 (81.15%), Query Frame = 0
Query:    1 MAEQFLPLPIKRQTPRVQLANPRQLAKWKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFKDREFEGWGRGFERVGEGDRPPLPGTKRYFDRGRNAKPSNDDILITQLSRPTLAKYDRSLRSFKFGKALDLAVETGKPQVLVCVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQACQKLSILRGSVESILSTIQY 520
            MAE F+PLP+ R  PRVQ+A+P QL KW+H+HKVA H YDQAVT + FSPLKP+ELAV+HDFSISLVNPSDGYTRK+LT FRDVAYSP YKKDGRLLVAGCAD SA VFD+AHRTVLRTFKAH GSVRTSKFSADGLR                 STSLF L++A D+VQAQ SSP SMHVWMT            RS+ECIFELDHSS+I+DVHILPGGARA+T+GG+E+RVWDFFVGGRVVYNLQPH+K +TCG  DV+GN F+TGGLDGYVKVHDLSSFQS GLMSF+SPI+SV +  +GKRYAAGM++GKLEIRAH KL  K H PFR DPFK+R+FEGWGRGFE++GE +    PGTKRYF+RG NAKPS DD+LI+ +S+P LA+YDRSL+ F F +AL LAVET KP+V+V V+EELIIRG LKGA+S R   ELVPLL++IRKHIR P  ++YL+YLMH ILDLY SEFG G +AD+ V  I RQL+ EV+ C +L+ ++GSVESIL TI+Y
Sbjct:    1 MAEPFVPLPVHRTRPRVQVAHPLQLTKWRHVHKVADHTYDQAVTHLHFSPLKPHELAVSHDFSISLVNPSDGYTRKNLTSFRDVAYSPYYKKDGRLLVAGCADASAHVFDIAHRTVLRTFKAHTGSVRTSKFSADGLRXXXXXXXXXXXXXXXXXSTSLFVLRDATDFVQAQTSSPTSMHVWMTXXXXXXXXXXXXRSKECIFELDHSSAITDVHILPGGARAITVGGSEVRVWDFFVGGRVVYNLQPHAKAVTCGAVDVIGNNFMTGGLDGYVKVHDLSSFQSKGLMSFSSPIMSVAVSPDGKRYAAGMADGKLEIRAHEKLVGKTHAPFRHDPFKERDFEGWGRGFEKIGEENTRLFPGTKRYFNRGPNAKPSIDDVLISHMSKPKLAQYDRSLKKFAFSEALSLAVETRKPEVVVRVIEELIIRGSLKGALSGRTQQELVPLLIIIRKHIRDPQHSDYLAYLMHAILDLYGSEFGRGGKADDFVVSILRQLKNEVRTCYQLNAIKGSVESILCTIRY 520          
BLAST of Ggra3417.t1 vs. uniprot
Match: R7Q520 (UTP15_C domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q520_CHOCR)

HSP 1 Score: 482 bits (1241), Expect = 2.870e-163
Identity = 251/523 (47.99%), Postives = 343/523 (65.58%), Query Frame = 0
Query:    1 MAEQFLPLPIKRQTPRVQLANPRQLAK----WKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFK-DREFEGWGRGFERVGEGDRPPLPGTKRYFDRGRNAKPSND-DILITQLSRPTLAKYDRSLRSFKFGKALDLAVETGKPQVLVCVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQACQKLSILRGSVESILST 517
            M E F PL + R      L+ P +L +    W  +  VA+H     VT V FSP+ PY++A +  FS+ L+    G   +SL RFRD AYSP YK DG+LLVAG + G A+VFD+  R VLR FK H+G VR++ FS+DG RV+TGSDD  V+ WDLATS  L +LK+ANDYV+ QA SPAS HVWM GS DRKARLYDLRS  C+F LDH   + DV ILPGGARA+TIGG E+++WDFF GG++++ L  H+K +T GV+DV G+   T GLDG VKVHDL +FQ+ G M F S ILS+ + S+G +YAAGM++G +E+R+  K  +K  +   Q   +  REFEG+GRGFE++   ++ P PG++RYF+RG  AKP+ D D ++    +  L  YD+SL+ F  G A+D AV T  P V++ VV+EL+ RG L  A++  K   L  +L +I+++IR P +T  L+ L++ ILD+Y +E G     D  +  I   +R EV  C  L  L+G+ E+ILS+
Sbjct:    1 MGEAFAPLLVPRPG---SLSTPFRLHQEASLWSSVGLVASHHLLSPVTHVTFSPVAPYDVAASSGFSVELIGSRAGNRLRSLARFRDTAYSPGYKPDGKLLVAGDSGGGARVFDLGSRAVLREFKGHKGPVRSAMFSSDGRRVMTGSDDSVVKAWDLATSRLLLSLKDANDYVRCQAHSPASQHVWMVGSLDRKARLYDLRSTNCLFTLDHGYQVDDVLILPGGARAITIGGPEVKIWDFFSGGKMIHRLGSHAKAVTSGVADVAGHCLATAGLDGVVKVHDLDTFQAKGRMRFASEILSLAVSSDGVKYAAGMADGTVEVRS-TKTSSKHISSVPQSTARRQREFEGYGRGFEKMRMEEKGPKPGSRRYFERGTRAKPTEDQDFVMKDYRKAELKDYDKSLQKFAHGDAIDQAVATRSPSVVISVVQELLTRGVLTSALAGHKQSSLDSILGVIQRNIRKPLYTNRLAQLLNAILDVYGAELGKNIAVDRKLGAILSAVRREVNECHDLMQLQGAAEAILSS 519          
BLAST of Ggra3417.t1 vs. uniprot
Match: A0A8J4H1B0 (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4H1B0_9CHLO)

HSP 1 Score: 301 bits (770), Expect = 1.570e-92
Identity = 179/518 (34.56%), Postives = 277/518 (53.47%), Query Frame = 0
Query:    8 LPIKRQTPRVQLANPRQLAKWKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNP-SDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRS-RECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITC-------GVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFKDREFEGWGRGFERVGEGDRPPLPGTKRYFDRGRNAKPSNDDILITQLSRPTLAKYDRSLRSFKFGKALDLAVETGKPQVLVCVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQACQKLSILRGSVESILS 516
            L I+R  PR  +    +   W+H       +   AV+ + F    P++LAV     + L N  +     ++++RF+DVAYS  ++ DGRL+VAG  DG  +VFD   R+VLR FKAH+   R ++F AD L VL+GSDD T R WD+++ T +  L    DYV+A A SP S  VW TG+ D   +L+DLR+    I  LDH + + DV   P GA AVT GG  + VWD   GGR++  L    K +TC       G       R L G LDG+VK+ +L SF+      + +P++S+ +  + +  A G+++G L +R HA+ K     P    P  +R+++             R       RYF RG++++ +  D  + +  +  L  YD+ LR F++ +ALD A+ T +PQV+V ++EEL  RG L  A++ R  + L PLL  + K+I  P +T+ LS + H +LD Y+   G     D L+  +  ++  E+    +L+ L G +E +L+
Sbjct:   11 LQIRRYAPR-SIRETAEGKYWRHFKTPIVSKQFGAVSHIDFCQQYPFDLAVTASTRVILYNGRAPNVVGRTISRFKDVAYSGCFRSDGRLVVAGGQDGIVQVFDANSRSVLRQFKAHKRPTRVARFGADKLHVLSGSDDVTARWWDVSSGTQVLRLDGHRDYVRAAAGSPNSPDVWATGAYDHCVKLWDLRAGNSAILGLDHGAPVEDVVFFPTGALAVTAGGNYLCVWDILGGGRLLKRLDNFQKTVTCIRLSPLAGPESAAAPRMLAGSLDGHVKIFELDSFRVTHASKYPAPVMSLGLSPDCRLLAVGLADGTLSVRKHARPKVVPGAPGLPKP--ERKYQ-------------RRLTAANYRYFIRGQSSRAAATDFRVLRQRQARLQPYDKLLRRFRYREALDAALATRQPQVVVSLLEELAARGGLVAALAGRNAEGLRPLLRHLVKYIGEPRYTKLLSNVGHRLLDTYAEVVGASPAVDRLLRALHNRIAEELGVMGQLAQLAGVLEPLLA 512          
BLAST of Ggra3417.t1 vs. uniprot
Match: A0A835Z7W5 (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W5_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.690e-90
Identity = 177/526 (33.65%), Postives = 274/526 (52.09%), Query Frame = 0
Query:    1 MAEQFLPLPIKRQTPRVQLANPRQLAKWKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFKDREFEGWGRGFERVGEGDRP---PLPGTKRYFDRG-RNAKPSNDDILITQLSRPTLAKYDRSLRSFKFGKALDLAVETGKPQVLVCVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQACQKLSILRGSVESILSTIQYSA 522
            M  +F  L +K Q P++Q  +  +   W+         +D   T++ +SP  PY+LAV+    +S+ + + G   ++++RF+ VAYS  ++ DGRL+  G A GS  V D   + +LRTF  H  +VR  ++SADGLR+ + SDD +VR+WDL T   +   +   DYV+A  +S AS   W+TG  D   RL+D R+   +  ++H + +  V  LPGG+   + GG  +++WD   GG++V+    H K ITC   +    R LTGGLDG VK+  LS++Q    + F +P+LS+ + ++G + AAG ++  L  R      A                         V   +RP   P  GT  Y  RG RNA P  DD L+ Q     L  YD+SLR F++ +ALDLA+ T  P V+  V+EELI R  L  A++ R    L P+L  + ++I  P +   L  + H + D Y+S  G  E  D L   + RQ+  EV   + +  L GS++++++     A
Sbjct:    1 MGTEFKRLALK-QFPQIQEKDTPEAKYWRKFSGPVVETHDAHCTSLHYSPAAPYDLAVSCGSHVSIRSGATGAKLRAISRFQGVAYSGVFRGDGRLIAGGDAKGSVIVADATSKAMLRTFAGHAAAVRAVRWSADGLRLASASDDKSVRLWDLPTGAHVGMREGHTDYVRAMDASAASADAWVTGGYDGTVRLWDARAAGAVRVMEHGAPVEAVLCLPGGSLVASAGGNVLKIWDAMGGGKLVHECSHHQKTITCLALNGSRTRLLTGGLDGLVKICSLSTYQVMHGLRFQAPLLSLALSADGVQMAAGTADCALTQRRRPAPSAAA-----------------------VRRAERPLYAPQRGTPAYLKRGSRNAVPGLDDTLVEQKRHKPLQPYDQSLRKFRYQEALDLALATRSPIVVASVLEELIQRRGLNIALAGRDEVTLEPILAFLARYIASPRYAPLLIDVTHAVADAYASALGESEGVDELFARLQRQIHCEVDFQKDMHALLGSMDAVIAAASLGA 502          
BLAST of Ggra3417.t1 vs. uniprot
Match: U3 small nucleolar RNA-associated protein 15 homolog n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BCFD9 (U3 small nucleolar RNA-associated protein 15 homolog n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BCFD9)

HSP 1 Score: 289 bits (739), Expect = 4.650e-88
Identity = 161/508 (31.69%), Postives = 265/508 (52.17%), Query Frame = 0
Query:   10 IKRQTPRVQLANPRQLAKWKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFKDREFEGWGRGFERVGEGDRPPLPGTKRYFDRGRNAKPSNDDILITQLSRPTLAKYDRSLRSFKFGKALDLAVETG-KPQVLVCVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQACQKLSILRGSVESILS 516
            + +  PR+          W         +   A++ V FS  +P++ AV     + + + +    +K+L+RF++ AYS  ++ DG+LLVAG  +G AKVFD + R VLR F  H  +V +++FS DGL+VL+ SDD +VR+WDL+    +F   E  DYV+    S +S ++W+TGS D   +++D RS   +  +DH   + D+ + P G    + G   +++WD   GGR+V     H K IT    D    R L+  LD +VK++D+  ++    + + SPILSV I    K    GMS+G L I+       K  +  R  P                      P  G+ RYF RG+N KP  DD ++T   +P L+ +D+ L++F++  ALD  ++    P V++ ++ ELI R  L+ A+S R  D L+P+L  + KHI  P +T  L  + +TILD+Y    G   + D+++  +  ++  E+   ++   L GS+++I +
Sbjct:    8 VVKSYPRIASRETSDTKYWNKYSFPITVKESSAISFVNFSQTQPHDFAVTTSNKVQIYSSTTNEVKKTLSRFKEQAYSGCFRPDGKLLVAGTENGIAKVFDASSRVVLREFTGHTRAVHSTRFSLDGLQVLSTSDDCSVRLWDLSGEKEIFKATEHKDYVRTSDVSSSSNNIWLTGSYDHTVKMWDNRSPASVMTIDHGHPVEDILVFPSGGLCASAGHNMIKIWDILAGGRLVAAFTNHQKTITSLCFDGQCTRLLSASLDRHVKIYDVKDYKVVHSIHYPSPILSVGISLNDKHIVVGMSDGLLSIKYRTPSSEKGESAVRSMP---------------------APRAGSYRYFLRGKNQKPEQDDFVVTSTRKPKLSAHDKFLKNFEYTNALDSVLQGRLNPPVVISLIMELIRRQGLQIALSGRDEDTLLPILSFLNKHICNPRYTPTLIDVTNTILDIYGPVLGQSPKLDDMLAKLKMKIASELNYQKQAFELMGSLDTIFA 494          
BLAST of Ggra3417.t1 vs. uniprot
Match: A0A0L0FNH1 (UTP15_C domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FNH1_9EUKA)

HSP 1 Score: 288 bits (737), Expect = 8.960e-88
Identity = 161/505 (31.88%), Postives = 275/505 (54.46%), Query Frame = 0
Query:   12 RQTPRVQLANPRQLAKWKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFKDREFEGWGRGFERVGEGDRPPLPGTKRYFDRGRNAKPSNDDILITQLSRPTLAKYDRSLRSFKFGKALDLAVETGKPQVLVCVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQACQKLSILRGSVESILS 516
            ++ PR+      +   W+        +   A++++ F   KP++ A++    + +   +    +K+++RF+DVA+SP  + DG+L+VAG   G  ++F ++ R V R F  H   VR ++F A    V+TGSDD TVR +D+ +    F LK  +DYV+  A +PAS  + ++GS D   +L+D R+ EC   +DH + + DV + PGG   V+ GG  ++VWD  +GGR+V++   H K +T    D   NR L+G LD +VK++D+ +++    + +++P++S+ +  E      GM++G L IR H   K+  +     D  K                  + P  GT++YF RG++ K S DD  +    +  LA+YD  ++ F++G ALD A+  G+P ++V ++EEL  R  LK AIS R    L PLLV + KH+  P ++  L  + + +LD+Y+   G  +  D LV  +  ++  E++  ++L  L G+ E IL+
Sbjct:   13 KRFPRLSQRATAETRYWRKFKFPITVKEYGAISSISFCNAKPHDFAISSSTRVQVFAANTNKVKKTVSRFKDVAHSPHIRDDGKLMVAGDDSGLVQIFSMSSREVFRQFSTHIRPVRWTRF-ASFTGVVTGSDDMTVRGFDIPSGEETFCLKGHSDYVRCGAVNPASNDLVLSGSYDHTVKLWDTRTSECSMTMDHGAPVEDVLMFPGGGMVVSCGGNTIKVWDMLMGGRMVHSFSNHQKTVTSLGFDGSSNRLLSGSLDHHVKIYDVKNYKVVHSIKYSAPVMSLAMSPEDTHLVVGMADGTLSIR-HKPNKSITNKGLAGDKAK------------------KAPRGGTQQYFKRGQDTKASEDDFRVEVRRKKGLAEYDVFMKKFQYGLALDAALVHGRPVIIVSLIEELAHRDGLKIAISGRDEAALTPLLVFLLKHVNNPRYSSLLIEVTNMVLDVYARVLGKSQAIDELVLKLRNKVHQELEFQKRLMELSGAFELILA 497          
BLAST of Ggra3417.t1 vs. uniprot
Match: A0A1X2H797 (WD40-repeat-containing domain protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H797_SYNRA)

HSP 1 Score: 286 bits (733), Expect = 5.010e-87
Identity = 160/492 (32.52%), Postives = 270/492 (54.88%), Query Frame = 0
Query:   28 WKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFKDREFEGWGRGFERVGEGDRPPLPGTKRYFDRGRNAK-PSNDDILITQLSRPTLAKYDRSLRSFKFGKALDLAVETGKPQVLV--CVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQACQKLSILRGSVESILS 516
            WK        +   AV++V FSP+ PY+ A+A    + + +      +K+++RF+D+AYS  +++DG+L+VAG   G  +VFDV  R +LRTF+ H   VR +KFS++  +++T SDD TVR+WD+    S+   ++  DYV+A   S  + H+ +TGS D+  +++D R   C+  + H + +  V + PGG   V+ GG  ++VWD   GGR ++ +    K +T    D   +R +TG LD +VKV+++  ++      + +PILSV +  +     AGM+N  L IR   ++K+++ T         ++ + + RG             GT +YF RG NA  P+ DD  +    R  LA YD+ L+  KF  ALD A+ T +  V +   +++ELI  G L+ A+  R    L P+L  + KHI+ P FT  +  +   +LDLY+  FG     D+L+ D+ R++R E++  ++L+    ++E + +
Sbjct:   25 WKKFKSPILIKEYGAVSSVYFSPVAPYDFAIASSTRVQIYSSKTHQPKKTISRFKDIAYSASFRQDGKLVVAGDETGLVQVFDVNSRAILRTFREHTLPVRVTKFSSENTQIMTASDDRTVRLWDIPAEKSIHVFEDHQDYVRAGVVSQDNPHMLVTGSYDQTIKIWDTRQNGCVMTMQHDAPVESVLMYPGGGAVVSAGGPGIKVWDLLSGGRCMHAVSNQQKTVTSLCFDSTASRLVTGSLDQHVKVYNVQDYKVAYSFKYPAPILSVALSPDDTHLVAGMTNSLLSIRKR-QVKSEERTA-------QQKKQQYIRG-------------GTYKYFMRGANAGLPAEDDFAVEHTRRRRLASYDKLLKKNKFSDALDEAIGTSRRTVSIGMALLQELIHVGGLEAALQGRDDVTLEPILRFLVKHIQDPRFTALVVDVSEVLLDLYTPSFGQSPLIDDLLKDLKRKVRKEIELQRQLAQTTAALEMLFA 495          
BLAST of Ggra3417.t1 vs. uniprot
Match: A7SWE8 (U3 small nucleolar RNA-associated protein 15 homolog n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SWE8_NEMVE)

HSP 1 Score: 285 bits (729), Expect = 1.500e-86
Identity = 166/515 (32.23%), Postives = 266/515 (51.65%), Query Frame = 0
Query:    1 MAEQFLPLPIKRQTPRVQLANPRQLAKWKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHT--PFRQDPFKDREFEGWGRGFERVGEGDRPPLPGTKRYFDRGRNAKPSNDDILITQLSRPTLAKYDRSLRSFKFGKALDLAVE--TGKPQVLVCVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVND----IFRQLRYEVQACQKLSIL 507
            MA +F  + +KR  P+V+         WK        R   AVT V F   KP++ AV     + + + +     K+++RF++VAY   ++ DG+L++AG  DG  ++FD+  R VLR FK H G V  +KF  D L +++ SDD  V  WD+AT  +    KE  DYV+   +S  +  +++TGS D   R++D R    +  LDH + +  + + P GA A+T G   +++WD   GGR+V +   H K IT    D    R L+G +D  VKV+DL  ++    M + SPILS+ +  +      GMS+G L I+       +  T  P R                         P PG+ +YF RG+N KP+ DD+++++  +  L KYD+ +++F++  ALD  ++  +  P V+V +++ELI RG L+ A+S R  + LVP+L  + ++I  P +T  L  + + +LD+YS   G     D L       I ++L +  QAC+ L  L
Sbjct:    1 MASEFHKIQVKRY-PKVERKQNSDSKYWKKFSSPIFAREYGAVTHVDFCNSKPHDFAVTGSTRVQIYSSTTHQVNKTISRFKEVAYCGTFRSDGQLMIAGGEDGLIQLFDLNSRAVLRQFKGHSGPVHVTKFLQDNLHIVSASDDKLVNCWDIATEQTTATYKEHEDYVRTGVASQVTSDIFLTGSYDHTVRMWDRRCNASVNTLDHGAPVECIQVYPNGAMAITAGENVIKIWDILSGGRLVTSFSNHQKTITSLCFDGAYKRLLSGSIDRNVKVYDLQDYKVVHSMDYPSPILSLAVSPDDSHIVVGMSDGLLSIKHRNNNMEETSTLPPPR-------------------------PRPGSFKYFIRGQNYKPTEDDVVVSEKRKTYLNKYDKLVKNFEYAAALDAILQPLSNHPPVVVAILQELIRRGGLERALSGRDEEGLVPILYFLIRNITNPRYTVVLIDVANILLDMYSPIIGQSPNIDQLFTSLREGITKELDFSQQACELLGAL 489          
BLAST of Ggra3417.t1 vs. uniprot
Match: A0A0D2UI43 (U3 small nucleolar RNA-associated protein 15 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UI43_CAPO3)

HSP 1 Score: 281 bits (720), Expect = 4.960e-85
Identity = 157/509 (30.84%), Postives = 260/509 (51.08%), Query Frame = 0
Query:   12 RQTPRVQLANPRQLAKWKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFKDREFEGWGRGFERVGEGDRPPLPGTKRYFDRGRNAKPSNDDILITQLSRPTLAKYDRSLRSFKFGKALDLAVETG-KPQVLVCVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQACQKLSILRGSVESILSTIQ 519
            +Q PR+      +   WK        +   AV+ + FSP  P++ AV     I + +      +K+L+RF+DVAY   +++DG+LLVAG   G  ++ D   R+VLRTF  HQ +V  ++F+ D  ++++  DD  VR WD+     + AL    DY++A   SP +  VW+TG  D   +L+D R+  C   ++H + +  +   PGG  A++ G  +++VWD   GGR++     H K IT    D  G R LT  LD +VK+HD++ +     + + +PILS+ +  +      GM+NG L IR H  +K  +                      R  + +R    GT RYF RG+  +PS DD  +    +  L  ++  L+ F++  ALD  + TG +P +++ ++EEL+ R  L+ A++ R    L PL+V + K+I  P ++  L  L + + D+Y+   G     D L   + R +  E+   ++L  L GS++ ILS+ Q
Sbjct:   40 KQYPRLARRETSESRYWKRFKFPVVVKEYSAVSHIHFSPTAPWDFAVTSSTRIQIYSKKSNTVKKTLSRFKDVAYCGTFRRDGKLLVAGDESGLVQLLDPNSRSVLRTFAGHQRAVHVTRFATDDNQIMSAGDDAVVRCWDIPAERQVLALTGHTDYIRAGVVSPVASDVWLTGGYDHMVKLWDTRAGSCTMSMNHGAPVEQILFFPGGGLALSAGSNQIKVWDVLAGGRLLQTFSNHQKTITSMCLDSQGKRLLTASLDQHVKIHDVTDYSVTHSIKYTAPILSMSLSPDDTHLVVGMANGLLSIR-HRAVKTAEVV--------------------RQLKSERAVRGGTYRYFVRGKTHQPSQDDFKVEVRRKRRLKPFEVFLKKFQYQNALDAVLNTGQRPIIVISLLEELVHRDGLRIALAGRDEITLEPLIVFLIKNIANPRYSSLLIDLSNMLFDIYTPALGQSIVIDELFVKLQRVIATEIAFQKQLYQLIGSLDMILSSSQ 527          
BLAST of Ggra3417.t1 vs. uniprot
Match: A0A1Y1WQ39 (WD40 repeat-like protein n=4 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1WQ39_9FUNG)

HSP 1 Score: 280 bits (716), Expect = 2.330e-84
Identity = 163/516 (31.59%), Postives = 270/516 (52.33%), Query Frame = 0
Query:    5 FLPLPIKRQTPRVQLANPRQLAKWKHIHKVAAHRYDQAVTTVRFSPLKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAGCADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRVWDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRECIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHSKGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDICSEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFKDREFEGWGRGFERVGEGDRPPLPGTKRYFDRGRNAKPSNDDILITQLSRPTLAKYDRSLRSFKFGKALDLAVETGKPQ---VLVCVVEELIIRGCLKGAISERKTDELVPLLVMIRKHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQACQKLSILRGSVESILST 517
            F  L IK+  PR++     +   W+        +    + ++ FSP++P+  AV     + + +P     +K+++RF D+AYS   + DG+LLVAG A G  ++FD+  R +LRTF+ H   V  +KFS++  ++L+ SDD TV++ D+   + L    E NDYV++   S  + ++ ++GS D   +L+D R  +C   LDH + +  V + PGG  AV++G   M++WD   GGR +  L  H K IT  + D    + LTG LD +VK++D+  F     + + SPILS+ +  +      GM++G L IR                    R        FER    +  P PGT  YF RG   KP + D+ + +  R  L  YDR L++F++G+ALD  +++ K     V++ ++EELI R  L+ A++ R    L P++  I ++I  P +TE L  + + ILD+Y    G     D L + I  ++R E++  +K+    G+++ I S+
Sbjct:    4 FQRLVIKKY-PRIETGYTNEYY-WRKFKNPILVKEHGPINSIYFSPVEPHNFAVTSSARVQIYSPVSHTVKKTISRFNDIAYSGHIRSDGQLLVAGDATGLIQMFDLNSRAILRTFREHSKPVHVTKFSSNKTQILSASDDKTVKLLDIPGQSVLNNFDEHNDYVRSALVSQDNSNIILSGSYDHTVKLWDARENKCTLTLDHGAPVESVLLYPGGGLAVSVGSNYMKIWDILAGGRTLKTLSNHQKTITSVIFDNSCTKILTGSLDHHVKIYDVQDFNVEHSLKYESPILSLGLSPDDTHLVVGMASGLLSIR-------------------QRIVHSEEMAFERE---NTMPFPGTYNYFMRGTTTKPKHTDLKVEKTRRIKLKNYDRYLKTFRYGQALDAVLDSSKTHNTAVVISMLEELINREGLRIALAGRDDVSLEPIVKFIMRNIINPNYTELLVNVTNVILDMYIHVIGQSVIVDELFSKIQTKVRSELKFERKIYQTLGALDMIFSS 495          
The following BLAST results are available for this feature:
BLAST of Ggra3417.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRT93.600e-26469.23U3 small nucleolar RNA-associated protein 15-like ... [more]
R7Q5202.870e-16347.99UTP15_C domain-containing protein n=1 Tax=Chondrus... [more]
A0A8J4H1B01.570e-9234.56Uncharacterized protein n=2 Tax=Volvox TaxID=3066 ... [more]
A0A835Z7W51.690e-9033.65WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
U3 small nucleolar RNA-associated protein 15 homolog n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106BCFD94.650e-8831.69U3 small nucleolar RNA-associated protein 15 homol... [more]
A0A0L0FNH18.960e-8831.88UTP15_C domain-containing protein n=1 Tax=Sphaerof... [more]
A0A1X2H7975.010e-8732.52WD40-repeat-containing domain protein n=1 Tax=Sync... [more]
A7SWE81.500e-8632.23U3 small nucleolar RNA-associated protein 15 homol... [more]
A0A0D2UI434.960e-8530.84U3 small nucleolar RNA-associated protein 15 n=1 T... [more]
A0A1Y1WQ392.330e-8431.59WD40 repeat-like protein n=4 Tax=Neocallimastigace... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 239..278
e-value: 0.012
score: 24.9
coord: 113..152
e-value: 2.6E-9
score: 46.9
coord: 27..68
e-value: 11.0
score: 10.4
coord: 155..195
e-value: 24.0
score: 8.2
coord: 198..235
e-value: 0.71
score: 17.9
coord: 71..110
e-value: 1.6
score: 15.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 116..152
e-value: 3.4E-7
score: 30.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 120..161
score: 15.821944
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 234..334
e-value: 3.4E-8
score: 35.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 16..233
e-value: 3.2E-40
score: 139.9
IPR018983U3 small nucleolar RNA-associated protein 15, C-terminalPFAMPF09384UTP15_Ccoord: 372..514
e-value: 6.9E-32
score: 110.2
NoneNo IPR availablePANTHERPTHR19924:SF26U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 HOMOLOGcoord: 24..517
NoneNo IPR availablePANTHERPTHR19924UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBERcoord: 24..517
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 120..155
score: 12.367405
NoneNo IPR availableCDDcd00200WD40coord: 82..317
e-value: 3.83237E-40
score: 145.17
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 139..153
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 27..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000905_piloncontigtig00000905_pilon:268653..270413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3417.t1Ggra3417.t1Gracilaria gracilis GNS1m malemRNAtig00000905_pilon 268653..270413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3417.t1 ID=Ggra3417.t1|Name=Ggra3417.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=523bp
MAEQFLPLPIKRQTPRVQLANPRQLAKWKHIHKVAAHRYDQAVTTVRFSP
LKPYELAVAHDFSISLVNPSDGYTRKSLTRFRDVAYSPDYKKDGRLLVAG
CADGSAKVFDVAHRTVLRTFKAHQGSVRTSKFSADGLRVLTGSDDHTVRV
WDLATSTSLFALKEANDYVQAQASSPASMHVWMTGSADRKARLYDLRSRE
CIFELDHSSSISDVHILPGGARAVTIGGTEMRVWDFFVGGRVVYNLQPHS
KGITCGVSDVLGNRFLTGGLDGYVKVHDLSSFQSNGLMSFNSPILSVDIC
SEGKRYAAGMSNGKLEIRAHAKLKAKQHTPFRQDPFKDREFEGWGRGFER
VGEGDRPPLPGTKRYFDRGRNAKPSNDDILITQLSRPTLAKYDRSLRSFK
FGKALDLAVETGKPQVLVCVVEELIIRGCLKGAISERKTDELVPLLVMIR
KHIRMPPFTEYLSYLMHTILDLYSSEFGGGEQADNLVNDIFRQLRYEVQA
CQKLSILRGSVESILSTIQYSA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR018983U3_snoRNA-assocProt_15_C
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf