Ggra4549.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4549.t1
Unique NameGgra4549.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length228
Homology
BLAST of Ggra4549.t1 vs. uniprot
Match: R7QAK6 (Phosphoglycolate phosphatase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAK6_CHOCR)

HSP 1 Score: 178 bits (451), Expect = 1.430e-52
Identity = 98/215 (45.58%), Postives = 131/215 (60.93%), Query Frame = 0
Query:    4 RGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGTQRLMSALLAERLGAAPDAATLGAAVDLKLRFEEHSE-HSGSVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADI 217
            R  +FDLDGTLVDSL DIAA+ NHAL  LG  P+ +  Y  +AGGG  +LM+ LL   LG  P +  +   V +K  +E   + H  +  F GV  ML  L  + V +A+LSNK +  VR VV    P + + Y+AGA +  PLKP P  AL+I+  + DGV  + C+FVGDT++DM T  +AGMT VGV WGFR  ++L+Q GA  V+  A  I
Sbjct:    2 RAAIFDLDGTLVDSLGDIAASANHALSFLGTQPRTIEEYRFLAGGGNTKLMTRLLQSVLGKEPPSDLVARCVQIKRNYENGPQGHVHTTVFPGVLDMLHALQQAGVQLAILSNKTEPNVREVVADHLPGIEWKYIAGARDDVPLKPDPTAALNIMRQHMDGVEVKDCVFVGDTDIDMKTGIAAGMTPVGVSWGFRPVDELKQHGAEIVVETALQI 216          
BLAST of Ggra4549.t1 vs. uniprot
Match: HAD family hydrolase n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCF0A8D (HAD family hydrolase n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCF0A8D)

HSP 1 Score: 157 bits (397), Expect = 1.640e-44
Identity = 99/224 (44.20%), Postives = 126/224 (56.25%), Query Frame = 0
Query:    1 MAFRGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGTQRLMSALLAERLGAAPDAATLGAAVDLKLR--FEEHSEHSGSVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADICAMVR 222
            M  R  +FDLDGTLVDSL DIAAA NH+L   G    P+  Y    G G + L+      R    PD   L  ++    R  +E+H     + PF G+  +L QLAA +V +AVLSNK     RR+V+G+ P VPF  + G     P KP P  AL +      G AP +C FVGDT VDM TA +AGM GVGV WGFRSAE+LR  GA  +   A ++ A++R
Sbjct:    1 MHLRAAIFDLDGTLVDSLADIAAAMNHSLASHGLPTHPVDDYRHYVGEGVRVLV------RKATPPDQVALHDSILAAYRAYYEDHL-FDRTRPFPGIPAVLSQLAAEDVRLAVLSNKADAFTRRLVEGLLPGVPFTAIYGERPGVPRKPDPTAALAVATEL--GAAPAECAFVGDTSVDMNTARNAGMYGVGVTWGFRSAEELRAEGARALATTADELLAVLR 215          
BLAST of Ggra4549.t1 vs. uniprot
Match: H8MMQ4 (Phosphoglycolate phosphatase n=31 Tax=Myxococcaceae TaxID=31 RepID=H8MMQ4_CORCM)

HSP 1 Score: 147 bits (371), Expect = 1.330e-40
Identity = 104/229 (45.41%), Postives = 125/229 (54.59%), Query Frame = 0
Query:    1 MAFRGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGTQRLMSALLAERL--GAAPDA-----ATLGAAVDLKLRFEEHSEHSGSVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADICAMVR 222
            M  R VLFDLDGTLVDSL DIA A NHAL++ G  P P   Y +  G G  +L     AER   GAAP       AT  A  D  L F+       +  + GV   L +LAA  V + VLSNK    V+R+   + P V F  V G     P KP P  AL +      GVAP  C FVGDT VDM TA +AGM GVGV WGFR+AE+LR  GA  V+ +A ++ A +R
Sbjct:    1 MLLRAVLFDLDGTLVDSLGDIATAMNHALQQHGLPPHPEAAYLRFVGEGVAKL-----AERATGGAAPSLQGQVLATYHAYYDTHL-FDR------TCAYPGVEAALAELAADGVRLGVLSNKSDDFVKRLAARLLPGVTFSAVYGERPGIPRKPDPTAALALAAEL--GVAPDACGFVGDTSVDMDTAKAAGMYGVGVTWGFRTAEELRAHGARAVVSSAGELLAALR 215          
BLAST of Ggra4549.t1 vs. uniprot
Match: A0A841RAM6 (Phosphoglycolate phosphatase n=1 Tax=Spirochaeta isovalerica TaxID=150 RepID=A0A841RAM6_9SPIO)

HSP 1 Score: 146 bits (368), Expect = 3.740e-40
Identity = 82/223 (36.77%), Postives = 127/223 (56.95%), Query Frame = 0
Query:    1 MAFRGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGTQRLMSALLAERLGAAPDAATLGAAVDLKLRFEEHSEHSGSVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADICAMVRE 223
            M ++ V+FD+DGTL+D++ DIA A N  L+E+G+   P   Y    G G ++L+   L E +    D        + ++ +    +++ +  ++G+  ML +L A  +PMA++SNK    V+ + D  F    FV +AG  +H P KP P  A     +   GV+P +CLFVGD+ VDM TA +AGMTGVGV WGFRS E+L+   A+ +I A   + ++  E
Sbjct:    1 MKYKAVIFDMDGTLLDTIDDIADASNRILKEMGYPEHPRESYFMFVGNGARKLIDRALPEEV--VTDELVDRLLSEFRVGYRS-IQYNKTDLYEGIGDMLSKLKALRIPMAIVSNKPDEMVKEIADHYFDPGLFVSIAGQKDHIPAKPDPQGAFAAARDL--GVSPDECLFVGDSSVDMDTALNAGMTGVGVSWGFRSVEELKAHKAAFIIDAPGQLLSLFSE 218          
BLAST of Ggra4549.t1 vs. uniprot
Match: Q1CX97 (Phosphoglycolate phosphatase n=16 Tax=Myxococcaceae TaxID=31 RepID=Q1CX97_MYXXD)

HSP 1 Score: 140 bits (353), Expect = 6.640e-38
Identity = 89/223 (39.91%), Postives = 116/223 (52.02%), Query Frame = 0
Query:    1 MAFRGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGTQRLMSALLAERLGAAPDAATLGAAVDLKLRFEEHSEHSGSVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADICAMVRE 223
            M  R V+FDLDGTLVDSL DIA A NHAL   G    P   Y +  G G + L+       + +  DA         K  +++H     +  + G+ +ML  LAA    +AVLSNK    V+R+V  + P   F  V G     P KP P  AL +      GV P  C FVGDT +DM TA +AGM GVGV WGFR  ++L+  GA  V   AA++ A +R+
Sbjct:    1 MLLRAVIFDLDGTLVDSLGDIADATNHALAHHGLPTHPESAYLRFVGSGVRELIR----RAVPSGQDALIEPVLASYKAYYDDHL-FDRTAHYPGIPEMLTALAAQGTKLAVLSNKSDDFVKRLVARLLPQASFAAVYGERPELPRKPDPTAALALASEL--GVPPAACGFVGDTSIDMDTARAAGMYGVGVAWGFREVDELKAHGARAVAATAAELLAALRD 216          
BLAST of Ggra4549.t1 vs. uniprot
Match: A0A2D9TCS7 (Haloacid dehalogenase n=1 Tax=Sandaracinus sp. TaxID=2024858 RepID=A0A2D9TCS7_9DELT)

HSP 1 Score: 139 bits (351), Expect = 1.060e-37
Identity = 92/214 (42.99%), Postives = 122/214 (57.01%), Query Frame = 0
Query:    4 RGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGTQRLMSALLAERLGAAPDAATLGAAVDLKLRFEEHSEHSGSVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADI 217
            R VLFDLDGTLVDSL DIA A NH L   G    P+  Y    G G   L+  +L +   A P    L  A   + R+  H   + + P+ GVH +L +LA   VP+AVLSNK + +V RVV+ +F DVPF  V GA E  P KP P   L +      G+ P +C +VGDTE+D+ T  +AGM  VGV WGFR  E+L +  A+ ++ A +D+
Sbjct:    3 RAVLFDLDGTLVDSLQDIADALNHVLGSEGLPTHPVETYRFHVGWGADDLVRRVLPDE--AKPRTEELLRA--FRARYTAHLVDA-TAPYPGVHALLAELARREVPIAVLSNKPEESVHRVVETLFADVPFQVVRGAREGVPHKPDPTSVLEVAAAM--GLEPGECFYVGDTEIDIQTGHAAGMVPVGVAWGFRP-EKLGE--AAHILEAPSDL 206          
BLAST of Ggra4549.t1 vs. uniprot
Match: A0A1V5IRD9 (Phosphoglycolate phosphatase n=1 Tax=Actinobacteria bacterium ADurb.BinA094 TaxID=1852790 RepID=A0A1V5IRD9_9ACTN)

HSP 1 Score: 139 bits (351), Expect = 1.290e-37
Identity = 90/222 (40.54%), Postives = 123/222 (55.41%), Query Frame = 0
Query:    1 MAFRGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGTQRLMSALLAERLGAAPDAATLGAAVDLKLRFEEHSEHS--GSVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADICAM 220
            M F GV+FDLDGTLVD+L DIA A +  L   G    P  RY  + G G + L+   L   L +A       A +      E++  H    +  ++GV ++LR L A  VP+A+ SNK  +  R +V  +     FV VAGA   APLKP P +AL I   +  G+ P +  +VGD+ VDM TA +AGM  VG  WGFR+ E+L ++GA  VI A AD+ A+
Sbjct:    1 MEFDGVIFDLDGTLVDTLEDIADAMDRVLAREGAPGHPYARYRYLIGRGIRNLVVEALPAELRSAERVDRCYARM-----LEDYGAHLLVKTHVYEGVPELLRALRAGGVPLAIHSNKADQPTRAIVAALLDPDAFVLVAGARPDAPLKPDPTVALRIAARF--GLPPARVAYVGDSSVDMQTATAAGMIAVGAAWGFRTREELVENGARAVIDAPADLLAL 215          
BLAST of Ggra4549.t1 vs. uniprot
Match: A0A7Y5GZZ7 (HAD-IA family hydrolase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y5GZZ7_9DELT)

HSP 1 Score: 139 bits (349), Expect = 2.860e-37
Identity = 90/228 (39.47%), Postives = 123/228 (53.95%), Query Frame = 0
Query:    4 RGVLFDLDGTLVDSLHDIAAACNHALRELG---HAPQPLRRYAQIAGGGTQRLM-SALLAERLGAAPDAATLGAAVDLKLRFEEHSEHSG---SVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADICAMVREQ 224
              V+FDLDGTLVD+L DI+ A N AL+ LG   H P  +R +    G G ++LM SAL  +R    P A TL         F  H +  G   S P+ G+  ML+QL  + +P+A+LSNK +   R++V  +FP   F  V G     PLKP+P  AL I H    GV P  C  VGD   D+  A SA MT +GV WGF +   LR  GA  ++ + A++  ++R +
Sbjct:    7 HAVIFDLDGTLVDTLQDISIAVNSALQHLGAPLHEPDTIRGFV---GQGVEQLMASALPHDRRTDVPQAVTL---------FRSHYDKHGLGHSKPYPGIMDMLQQLVDTTIPLAILSNKYEPATRQIVSALFPPQWFADVRGQRPDVPLKPNPTSALQICHRL--GVHPSNCAMVGDLAADIEVAKSADMTPIGVAWGFGTVSLLRDLGAHEIVYSPAELTEVLRRR 220          
BLAST of Ggra4549.t1 vs. uniprot
Match: A0A7W8FFI8 (Phosphoglycolate phosphatase n=1 Tax=Desulfovibrio intestinalis TaxID=58621 RepID=A0A7W8FFI8_9DELT)

HSP 1 Score: 138 bits (348), Expect = 3.620e-37
Identity = 84/220 (38.18%), Postives = 121/220 (55.00%), Query Frame = 0
Query:    4 RGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGTQRLMSALLAERLGAAPDAATLGAAVDLKLRFEEHSEHSGSVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADICAMVRE 223
            +   FDLDGTL+DSL DI  ACN  L + G+   PL +Y    G G  +L+ A L     AA D  T    V+   ++     +  + P+DGV   L +L+A+  P+A+LSNK +     +V   F  +PF  V GA +  PLKP PH  L ++       A  Q L+VGD++VD+ TA +AG+  VGV WGFR A++LRQ+GA  +I   + +  +  E
Sbjct:    2 KAFFFDLDGTLLDSLADIGNACNAILEKHGYPTHPLPKYRHFVGNGFGKLVRATLPA--DAALDDQTKAQLVEEARQYYGLHMYDCTRPYDGVIPALEKLSAAGHPLAILSNKPEEHTLEIVQRYFSAIPFTLVRGARKDVPLKPQPHALLDMMKTMNTSAA--QTLYVGDSDVDVLTARNAGVISVGVAWGFRGADELRQAGADHIIDTPSQLPKLAEE 217          
BLAST of Ggra4549.t1 vs. uniprot
Match: A0A0H4XAS1 (Phosphoglycolate phosphatase n=1 Tax=Myxococcus hansupus TaxID=1297742 RepID=A0A0H4XAS1_9DELT)

HSP 1 Score: 138 bits (347), Expect = 5.250e-37
Identity = 89/223 (39.91%), Postives = 114/223 (51.12%), Query Frame = 0
Query:    1 MAFRGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGTQRLMSALLAERLGAAPDAATLGAAVDLKLRFEEHSEHSGSVPFDGVHQMLRQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHPHMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAEQLRQSGASRVIGAAADICAMVRE 223
            M  R V+FDLDGTLVDSL DIA A NHAL   G    P   Y +  G G + L+       + A  +          K  +++H     +  + G+ +ML  LA     MAVLSNK    V+R+V  + P VPF  V G     P KP P  AL +      GVAP +C FVGDT +DM TA +AGM GVGV WGFR   +L+  GA  V   A  +   +R+
Sbjct:    1 MLLRAVIFDLDGTLVDSLGDIADATNHALTLHGLPTHPESAYLRFVGSGVRELIR----RAVPAGREDLLEPVLASYKAYYDDHL-FDRTAHYPGIPEMLTALAGDGARMAVLSNKSDDFVKRLVARLLPGVPFAAVYGERPDLPRKPDPTAALALAREL--GVAPTECAFVGDTSIDMDTARAAGMYGVGVAWGFREVAELKAHGARAVADTAQSLLTALRD 216          
The following BLAST results are available for this feature:
BLAST of Ggra4549.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QAK61.430e-5245.58Phosphoglycolate phosphatase n=1 Tax=Chondrus cris... [more]
HAD family hydrolase n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CCF0A8D1.640e-4444.20HAD family hydrolase n=1 Tax=Cystobacter gracilis ... [more]
H8MMQ41.330e-4045.41Phosphoglycolate phosphatase n=31 Tax=Myxococcacea... [more]
A0A841RAM63.740e-4036.77Phosphoglycolate phosphatase n=1 Tax=Spirochaeta i... [more]
Q1CX976.640e-3839.91Phosphoglycolate phosphatase n=16 Tax=Myxococcacea... [more]
A0A2D9TCS71.060e-3742.99Haloacid dehalogenase n=1 Tax=Sandaracinus sp. Tax... [more]
A0A1V5IRD91.290e-3740.54Phosphoglycolate phosphatase n=1 Tax=Actinobacteri... [more]
A0A7Y5GZZ72.860e-3739.47HAD-IA family hydrolase n=1 Tax=Myxococcales bacte... [more]
A0A7W8FFI83.620e-3738.18Phosphoglycolate phosphatase n=1 Tax=Desulfovibrio... [more]
A0A0H4XAS15.250e-3739.91Phosphoglycolate phosphatase n=1 Tax=Myxococcus ha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006439HAD hydrolase, subfamily IAPRINTSPR00413HADHALOGNASEcoord: 103..116
score: 33.93
coord: 3..14
score: 56.94
coord: 134..150
score: 24.51
IPR006439HAD hydrolase, subfamily IATIGRFAMTIGR01549TIGR01549coord: 96..186
e-value: 9.2E-7
score: 27.3
IPR041492Haloacid dehalogenase-like hydrolasePFAMPF13419HAD_2coord: 6..191
e-value: 6.4E-25
score: 88.3
IPR023198Phosphoglycolate phosphatase-like, domain 2GENE3D1.10.150.240Putative phosphatase; domain 2coord: 18..88
e-value: 4.3E-51
score: 175.9
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 6..211
e-value: 4.3E-51
score: 175.9
NoneNo IPR availableSFLDSFLDG01129C1.5:_HAD,_Beta-PGM,_Phosphatcoord: 3..217
e-value: 3.6E-28
score: 93.4
NoneNo IPR availableSFLDSFLDS00003Haloacid_Dehalogenasecoord: 3..217
e-value: 3.6E-28
score: 93.4
NoneNo IPR availablePANTHERPTHR43434:SF15PHOSPHOGLYCOLATE PHOSPHATASEcoord: 6..219
NoneNo IPR availablePANTHERPTHR43434PHOSPHOGLYCOLATE PHOSPHATASEcoord: 6..219
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 3..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:974384..975067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4549.t1Ggra4549.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 974384..975067 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4549.t1 ID=Ggra4549.t1|Name=Ggra4549.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=228bp
MAFRGVLFDLDGTLVDSLHDIAAACNHALRELGHAPQPLRRYAQIAGGGT
QRLMSALLAERLGAAPDAATLGAAVDLKLRFEEHSEHSGSVPFDGVHQML
RQLAASNVPMAVLSNKLQRTVRRVVDGVFPDVPFVYVAGATEHAPLKPHP
HMALHIVHNYFDGVAPQQCLFVGDTEVDMGTAASAGMTGVGVPWGFRSAE
QLRQSGASRVIGAAADICAMVREQPRQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006439HAD-SF_hydro_IA
IPR041492HAD_2
IPR023198PGP-like_dom2
IPR023214HAD_sf
IPR036412HAD-like_sf