Ggra4563.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A2V3IXL8 (DNA-directed RNA polymerase subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL8_9FLOR) HSP 1 Score: 297 bits (761), Expect = 1.530e-89 Identity = 166/279 (59.50%), Postives = 182/279 (65.23%), Query Frame = 0
Query: 1 MLPVSPLAVRLFVARNGLRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT----------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
+LPV P VR V R GLRNED+ T KLGDIVKNNNALR+LES GAVAHT+REQIDLVQYHVA YMNNEIPGVV +T LHEVGV RTIAQNLTYPE+ TTYNMAEMRKLV N PNEYPGA I+RE+G+K +LAYL+DRSMV++EVG+KVIRHI+DGDYV VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHC +SPQG
Sbjct: 220 LLPVPPPPVRPSVMRGGLRNEDDLTNKLGDIVKNNNALRILESNGAVAHTIREQIDLVQYHVATYMNNEIPGVVASTVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPRTIAQNLTYPEVVTTYNMAEMRKLVENGPNEYPGAKMIEREDGRKTNLAYLADRSMVQLEVGYKVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 498
BLAST of Ggra4563.t1 vs. uniprot
Match: O09451 (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Bonnemaisonia hamifera TaxID=31369 RepID=O09451_9FLOR) HSP 1 Score: 265 bits (678), Expect = 2.190e-78 Identity = 149/279 (53.41%), Postives = 176/279 (63.08%), Query Frame = 0
Query: 1 MLPVSPLAVRLFVARNGLRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT----------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
+LPV P VR V R GLRNED+ T KLGDIVKNNN LR LE+TGAVAH +REQIDLVQYHVA YMNNE+PG++ AT LHEVGV +IA+NLTYPE+ T+YN+ EM+KLV N P+EYPGA I+RE+G KV+LAY+ +RS +++E+G+KVIRHI+DGDYV VTSPYNADFDGDEMNLHVPQ+HQTRAEVQELMLVPHC +SPQG
Sbjct: 146 LLPVPPPQVRPSVMRGGLRNEDDLTNKLGDIVKNNNTLRNLEATGAVAHAIREQIDLVQYHVATYMNNELPGIMPATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPFSIARNLTYPEIVTSYNIDEMQKLVENGPDEYPGAKYIEREDGFKVNLAYVRNRSELQLELGYKVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTHQTRAEVQELMLVPHCIVSPQG 424
BLAST of Ggra4563.t1 vs. uniprot
Match: Q9AXN1 (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Botryocladia uvarioides TaxID=145666 RepID=Q9AXN1_9FLOR) HSP 1 Score: 261 bits (667), Expect = 6.600e-77 Identity = 148/279 (53.05%), Postives = 170/279 (60.93%), Query Frame = 0
Query: 1 MLPVSPLAVRLFVARNGLRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT----------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
+LPV PL VR V GLRNED+ T KLGDIVKNNN LR +E+ G VAH +REQ+DLVQYHVA YMNNEIPGV AT LHEVGV +IA+NLT+PE T+YN AEMRKLV N P EYPGA I+R++G+KV+L+Y++DR+ +E+GFKVIRHIKDGDYV VTSPYNADFDGDEMNLHVPQSH TRAEVQELMLVPHC +SPQG
Sbjct: 147 VLPVPPLQVRPSVMHGGLRNEDDLTNKLGDIVKNNNMLRDMEAQGTVAHLLREQLDLVQYHVATYMNNEIPGVSQATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLLLHEVGVPYSIAKNLTFPETVTSYNYAEMRKLVENGPTEYPGAKYIERDDGQKVNLSYVADRTSTNLEIGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHGTRAEVQELMLVPHCIVSPQG 425
BLAST of Ggra4563.t1 vs. uniprot
Match: R7QLG5 (DNA-directed RNA polymerase subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLG5_CHOCR) HSP 1 Score: 215 bits (548), Expect = 6.480e-61 Identity = 127/279 (45.52%), Postives = 155/279 (55.56%), Query Frame = 0
Query: 1 MLPVSPLAVRLFVARNGLRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT----------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
+LPV P VR V RNG RNED+ T KLGDI++NNN L+ LESTGAVAH ++EQ L+QYHV YMNNE GV+ AT LHEVGV +IA NLTYPE+ T +N ++ KLV+ P+ +PG + I+ E+ +V Y + + +++ VG KV RHI+DGDYV VTSPYNADFDGDEMNLHVPQSH TRAEVQELMLVPHC +SPQG
Sbjct: 220 LLPVPPPHVRPSVMRNGSRNEDDLTSKLGDILRNNNLLKTLESTGAVAHVLKEQEALLQYHVVTYMNNEFAGVIPATVKGGGRNIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPISIAMNLTYPEIVTPFNREDLTKLVMRGPHSHPGVNYIESED--RVFSLYFQNPADIQLTVGMKVFRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHLTRAEVQELMLVPHCIVSPQG 496
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A5J4YJT1 (DNA-directed RNA polymerase subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJT1_PORPP) HSP 1 Score: 206 bits (525), Expect = 7.980e-58 Identity = 125/277 (45.13%), Postives = 153/277 (55.23%), Query Frame = 0
Query: 3 PVSPLAVRLFVARNG-LRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPG-----------------------------------------VVTAT----LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
PV P VR + + +R ED+ T KLGDIVKNNNALR LE GA H + EQIDL+QYHVA YMNNE+PG V+TA L EVGV +TIA NLTYPE+ T +N EM +LV+N P+EYPGA + R++G ++ LAY +RS ++ G KV+RHI+DGD V VTSPYNADFDGDEMN+HVPQS TRAE+ ELM+VP C +SPQG
Sbjct: 226 PVPPPPVRPSIMMDATMRGEDDLTHKLGDIVKNNNALRHLELNGAPLHRINEQIDLLQYHVATYMNNEMPGLPRAEQKGGRPIKSINQRLKGKEGRVRGNIMGKRVNFSARTVITADPNLMLDEVGVPKTIAMNLTYPEVVTRFNYEEMMRLVVNGPDEYPGAKYVVRDDGTQIDLAYYRNRSDFDLQYGMKVVRHIRDGDCVMFNRQPSLHKMSIMGHRVRVLPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSTLTRAEILELMMVPRCIVSPQG 502
BLAST of Ggra4563.t1 vs. uniprot
Match: Q9AXN0 (DNA-directed RNA polymerase subunit n=1 Tax=Glaucosphaera vacuolata TaxID=38265 RepID=Q9AXN0_9RHOD) HSP 1 Score: 201 bits (510), Expect = 8.200e-56 Identity = 119/279 (42.65%), Postives = 154/279 (55.20%), Query Frame = 0
Query: 1 MLPVSPLAVRLFVARNG-LRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTA---------------------------------------------TLHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYVV-------------------------------TSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
+ PV P +R V + +R ED+ T KLGDIV+NNNALR +E TGA AH + EQI ++Q H+ MNN++PG+ A L +VGV +TIA NLTYPE+ T +N+ +MR+LV+N PNEYPGA I+R +G KV+LA++ +RS + + G KVIRH+ DGDYV+ TSPYNADFDGDEMNLHVPQS Q RAEV +LM+VP C +SPQG
Sbjct: 224 LFPVPPPHIRPSVMMDASMRGEDDLTYKLGDIVRNNNALREMERTGAPAHRLNEQIHVLQAHIITIMNNDLPGMPRAHQKSGRPIKSISQRLKGKEGRVRGNLMGKRVDFSGRTVISPDPNLRLDQVGVPQTIAMNLTYPEVVTPFNVEKMRRLVMNGPNEYPGAKYIERLDGSKVNLAFVKNRSDIHLNNGEKVIRHLLDGDYVIFNRQPSLHKMSIMGHRVKVMRYSSFRLNLSCTSPYNADFDGDEMNLHVPQSPQARAEVMQLMMVPRCIVSPQG 502
BLAST of Ggra4563.t1 vs. uniprot
Match: O04142 (DNA-directed RNA polymerase subunit (Fragment) n=2 Tax=Bangiaceae TaxID=31345 RepID=O04142_NEOYE) HSP 1 Score: 198 bits (503), Expect = 7.120e-55 Identity = 119/279 (42.65%), Postives = 155/279 (55.56%), Query Frame = 0
Query: 1 MLPVSPLAVRLFVARNGL-RNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT---------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYVV-------------------------------TSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
+LPV P VR + + R ED+ T L IVKNN ALR LE GA AH + EQI L+Q+HVA YMNN++PG+ A L +VGV +IA+NLT+PE T YN+ EM++LV N P+EYP A IQR++G +V+LAY+ +R+ V++E+G+KV+RHI +GD++V TSPYNADFDGDEMNLHVPQ+H TRAEV ELM+VP C +SPQG
Sbjct: 164 LLPVPPPHVRTSIMMDATQRGEDDLTHNLAVIVKNNTALRNLEGHGAPAHRLAEQIFLLQFHVATYMNNDLPGMPRAAQKSGRPLKSISQRLKGKEGRLRGNLMGKRVDFSARTVITPDPNLRLDQVGVPFSIAKNLTFPETVTAYNIEEMQQLVENGPDEYPDAKYIQRDDGYQVNLAYVRNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQG 442
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A7S3EQ85 (DNA-directed RNA polymerase subunit n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQ85_9RHOD) HSP 1 Score: 189 bits (480), Expect = 8.750e-52 Identity = 115/283 (40.64%), Postives = 149/283 (52.65%), Query Frame = 0
Query: 1 MLPVSPLAVRLFVARNGL-RNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT-------------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
+LPV P VR + + R ED+ T L DIVK NN LR E G +R+Q++L+Q+ VA Y+NNE+PG+ AT L EVGV R+IA NLTYPE+ T +N+ MR+LV N P+ YPGA I+R++G K+SL Y+++R V +EVG+KVIRH+ DGD V VTSPYNADFDGDEMN+HV ++HQTRAEV E+M VP C +SPQG
Sbjct: 221 LLPVPPPHVRPSIMLDATKRGEDDLTHALADIVKCNNLLRTYEEQGMAQQDIRKQVELLQFKVASYLNNELPGLPRATQGGKTGGKRPLKSISQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLWLDEVGVPRSIAMNLTYPEVVTPFNIERMRELVFNGPDTYPGAKFIERDDGFKMSLGYIANRGDVPLEVGYKVIRHLCDGDVVLFNRQPSLHKMSIMGHRVRVMPYSTFRLNLSVTSPYNADFDGDEMNMHVAETHQTRAEVHEIMKVPRCIVSPQG 503
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A7S1T799 (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T799_9RHOD) HSP 1 Score: 181 bits (459), Expect = 5.630e-49 Identity = 119/289 (41.18%), Postives = 151/289 (52.25%), Query Frame = 0
Query: 1 MLPVSPLAVRLFVARNGLRN-EDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGV-------------VTATLH--------------------------------EVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQ------GIVSD 206
+LPV P VR + + +R ED+ T KLGDI+ N LR LES G+ +H V EQ+ L+Q+HVA YMNNE+P + +T L EVGV R+IA NLT+PE+ T YN M ++V P+EYPGA I+ ++G+K S+ YL D+ + E+G+KVIRHI DGD V VTSPYNADFDGDEMN+HV QSHQTRAE+ ELM VP C +SPQ GIV D
Sbjct: 219 LLPVPPPHVRPSIMLDPVRRGEDDLTFKLGDIISANLQLRELESRGSASHLVDEQVKLLQFHVATYMNNELPNIPKAMQKGGRPIKSITQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLMPDEVGVPRSIAMNLTFPEVVTPYNYDRMMEVVARGPDEYPGAKYIETDDGQKFSILYLRDKPL---EIGWKVIRHIVDGDVVLFNRQPSLHKMSIMGHRIRVMEHSTFRLNLSVTSPYNADFDGDEMNMHVAQSHQTRAEIFELMSVPRCIVSPQSNKPVMGIVQD 504
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A6G0V624 (DNA-directed RNA polymerase subunit n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0V624_9BILA) HSP 1 Score: 178 bits (451), Expect = 6.890e-48 Identity = 113/289 (39.10%), Postives = 151/289 (52.25%), Query Frame = 0
Query: 1 MLPVSPLAVRLFVARNG-LRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT---------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYVV-------------------------------TSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQ------GIVSD 206
++PV PLAVR V G RN+D+ T KL DIVK NN LR ES GA AH + E + L+QYHVA ++N+IPG+ TAT + VGV RTIAQNLT+PEL T +N+ ++++V+ YPGA I RENG++V L Y + + ++ G++V RH++DGD VV T+PYNADFDGDEMNLH+PQS +TRAE+QE+ +VP ++PQ GIV D
Sbjct: 240 VMPVPPLAVRPAVVTFGSARNQDDLTHKLSDIVKTNNQLRKNESQGAAAHIIAEDVKLLQYHVATLVDNQIPGLPTATQKGGRPLKSVKQRLKGKEGRIRGNLMGKRVDFSARTVITPDPNLPIDHVGVPRTIAQNLTFPELVTPFNIDTLQEMVIRGDKSYPGAKYIIRENGERVDLRYHPRAADLHLQPGYRVERHMRDGDIVVFNRQPTLHKMSMMGHKVKVLPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQEIAMVPRQLITPQANKPVMGIVQD 528 The following BLAST results are available for this feature:
BLAST of Ggra4563.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra4563.t1 ID=Ggra4563.t1|Name=Ggra4563.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bpback to top |