Ggra4563.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4563.t1
Unique NameGgra4563.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length215
Homology
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A2V3IXL8 (DNA-directed RNA polymerase subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL8_9FLOR)

HSP 1 Score: 297 bits (761), Expect = 1.530e-89
Identity = 166/279 (59.50%), Postives = 182/279 (65.23%), Query Frame = 0
Query:    1 MLPVSPLAVRLFVARNGLRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT----------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
            +LPV P  VR  V R GLRNED+ T KLGDIVKNNNALR+LES GAVAHT+REQIDLVQYHVA YMNNEIPGVV +T                                              LHEVGV RTIAQNLTYPE+ TTYNMAEMRKLV N PNEYPGA  I+RE+G+K +LAYL+DRSMV++EVG+KVIRHI+DGDYV                               VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHC +SPQG
Sbjct:  220 LLPVPPPPVRPSVMRGGLRNEDDLTNKLGDIVKNNNALRILESNGAVAHTIREQIDLVQYHVATYMNNEIPGVVASTVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPRTIAQNLTYPEVVTTYNMAEMRKLVENGPNEYPGAKMIEREDGRKTNLAYLADRSMVQLEVGYKVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQG 498          
BLAST of Ggra4563.t1 vs. uniprot
Match: O09451 (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Bonnemaisonia hamifera TaxID=31369 RepID=O09451_9FLOR)

HSP 1 Score: 265 bits (678), Expect = 2.190e-78
Identity = 149/279 (53.41%), Postives = 176/279 (63.08%), Query Frame = 0
Query:    1 MLPVSPLAVRLFVARNGLRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT----------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
            +LPV P  VR  V R GLRNED+ T KLGDIVKNNN LR LE+TGAVAH +REQIDLVQYHVA YMNNE+PG++ AT                                              LHEVGV  +IA+NLTYPE+ T+YN+ EM+KLV N P+EYPGA  I+RE+G KV+LAY+ +RS +++E+G+KVIRHI+DGDYV                               VTSPYNADFDGDEMNLHVPQ+HQTRAEVQELMLVPHC +SPQG
Sbjct:  146 LLPVPPPQVRPSVMRGGLRNEDDLTNKLGDIVKNNNTLRNLEATGAVAHAIREQIDLVQYHVATYMNNELPGIMPATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPFSIARNLTYPEIVTSYNIDEMQKLVENGPDEYPGAKYIEREDGFKVNLAYVRNRSELQLELGYKVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTHQTRAEVQELMLVPHCIVSPQG 424          
BLAST of Ggra4563.t1 vs. uniprot
Match: Q9AXN1 (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Botryocladia uvarioides TaxID=145666 RepID=Q9AXN1_9FLOR)

HSP 1 Score: 261 bits (667), Expect = 6.600e-77
Identity = 148/279 (53.05%), Postives = 170/279 (60.93%), Query Frame = 0
Query:    1 MLPVSPLAVRLFVARNGLRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT----------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
            +LPV PL VR  V   GLRNED+ T KLGDIVKNNN LR +E+ G VAH +REQ+DLVQYHVA YMNNEIPGV  AT                                              LHEVGV  +IA+NLT+PE  T+YN AEMRKLV N P EYPGA  I+R++G+KV+L+Y++DR+   +E+GFKVIRHIKDGDYV                               VTSPYNADFDGDEMNLHVPQSH TRAEVQELMLVPHC +SPQG
Sbjct:  147 VLPVPPLQVRPSVMHGGLRNEDDLTNKLGDIVKNNNMLRDMEAQGTVAHLLREQLDLVQYHVATYMNNEIPGVSQATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLLLHEVGVPYSIAKNLTFPETVTSYNYAEMRKLVENGPTEYPGAKYIERDDGQKVNLSYVADRTSTNLEIGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHGTRAEVQELMLVPHCIVSPQG 425          
BLAST of Ggra4563.t1 vs. uniprot
Match: R7QLG5 (DNA-directed RNA polymerase subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLG5_CHOCR)

HSP 1 Score: 215 bits (548), Expect = 6.480e-61
Identity = 127/279 (45.52%), Postives = 155/279 (55.56%), Query Frame = 0
Query:    1 MLPVSPLAVRLFVARNGLRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT----------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
            +LPV P  VR  V RNG RNED+ T KLGDI++NNN L+ LESTGAVAH ++EQ  L+QYHV  YMNNE  GV+ AT                                              LHEVGV  +IA NLTYPE+ T +N  ++ KLV+  P+ +PG + I+ E+  +V   Y  + + +++ VG KV RHI+DGDYV                               VTSPYNADFDGDEMNLHVPQSH TRAEVQELMLVPHC +SPQG
Sbjct:  220 LLPVPPPHVRPSVMRNGSRNEDDLTSKLGDILRNNNLLKTLESTGAVAHVLKEQEALLQYHVVTYMNNEFAGVIPATVKGGGRNIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPISIAMNLTYPEIVTPFNREDLTKLVMRGPHSHPGVNYIESED--RVFSLYFQNPADIQLTVGMKVFRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHLTRAEVQELMLVPHCIVSPQG 496          
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A5J4YJT1 (DNA-directed RNA polymerase subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJT1_PORPP)

HSP 1 Score: 206 bits (525), Expect = 7.980e-58
Identity = 125/277 (45.13%), Postives = 153/277 (55.23%), Query Frame = 0
Query:    3 PVSPLAVRLFVARNG-LRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPG-----------------------------------------VVTAT----LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
            PV P  VR  +  +  +R ED+ T KLGDIVKNNNALR LE  GA  H + EQIDL+QYHVA YMNNE+PG                                         V+TA     L EVGV +TIA NLTYPE+ T +N  EM +LV+N P+EYPGA  + R++G ++ LAY  +RS   ++ G KV+RHI+DGD V                               VTSPYNADFDGDEMN+HVPQS  TRAE+ ELM+VP C +SPQG
Sbjct:  226 PVPPPPVRPSIMMDATMRGEDDLTHKLGDIVKNNNALRHLELNGAPLHRINEQIDLLQYHVATYMNNEMPGLPRAEQKGGRPIKSINQRLKGKEGRVRGNIMGKRVNFSARTVITADPNLMLDEVGVPKTIAMNLTYPEVVTRFNYEEMMRLVVNGPDEYPGAKYVVRDDGTQIDLAYYRNRSDFDLQYGMKVVRHIRDGDCVMFNRQPSLHKMSIMGHRVRVLPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSTLTRAEILELMMVPRCIVSPQG 502          
BLAST of Ggra4563.t1 vs. uniprot
Match: Q9AXN0 (DNA-directed RNA polymerase subunit n=1 Tax=Glaucosphaera vacuolata TaxID=38265 RepID=Q9AXN0_9RHOD)

HSP 1 Score: 201 bits (510), Expect = 8.200e-56
Identity = 119/279 (42.65%), Postives = 154/279 (55.20%), Query Frame = 0
Query:    1 MLPVSPLAVRLFVARNG-LRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTA---------------------------------------------TLHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYVV-------------------------------TSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
            + PV P  +R  V  +  +R ED+ T KLGDIV+NNNALR +E TGA AH + EQI ++Q H+   MNN++PG+  A                                              L +VGV +TIA NLTYPE+ T +N+ +MR+LV+N PNEYPGA  I+R +G KV+LA++ +RS + +  G KVIRH+ DGDYV+                               TSPYNADFDGDEMNLHVPQS Q RAEV +LM+VP C +SPQG
Sbjct:  224 LFPVPPPHIRPSVMMDASMRGEDDLTYKLGDIVRNNNALREMERTGAPAHRLNEQIHVLQAHIITIMNNDLPGMPRAHQKSGRPIKSISQRLKGKEGRVRGNLMGKRVDFSGRTVISPDPNLRLDQVGVPQTIAMNLTYPEVVTPFNVEKMRRLVMNGPNEYPGAKYIERLDGSKVNLAFVKNRSDIHLNNGEKVIRHLLDGDYVIFNRQPSLHKMSIMGHRVKVMRYSSFRLNLSCTSPYNADFDGDEMNLHVPQSPQARAEVMQLMMVPRCIVSPQG 502          
BLAST of Ggra4563.t1 vs. uniprot
Match: O04142 (DNA-directed RNA polymerase subunit (Fragment) n=2 Tax=Bangiaceae TaxID=31345 RepID=O04142_NEOYE)

HSP 1 Score: 198 bits (503), Expect = 7.120e-55
Identity = 119/279 (42.65%), Postives = 155/279 (55.56%), Query Frame = 0
Query:    1 MLPVSPLAVRLFVARNGL-RNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT---------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYVV-------------------------------TSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
            +LPV P  VR  +  +   R ED+ T  L  IVKNN ALR LE  GA AH + EQI L+Q+HVA YMNN++PG+  A                                              L +VGV  +IA+NLT+PE  T YN+ EM++LV N P+EYP A  IQR++G +V+LAY+ +R+ V++E+G+KV+RHI +GD++V                               TSPYNADFDGDEMNLHVPQ+H TRAEV ELM+VP C +SPQG
Sbjct:  164 LLPVPPPHVRTSIMMDATQRGEDDLTHNLAVIVKNNTALRNLEGHGAPAHRLAEQIFLLQFHVATYMNNDLPGMPRAAQKSGRPLKSISQRLKGKEGRLRGNLMGKRVDFSARTVITPDPNLRLDQVGVPFSIAKNLTFPETVTAYNIEEMQQLVENGPDEYPDAKYIQRDDGYQVNLAYVRNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQG 442          
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A7S3EQ85 (DNA-directed RNA polymerase subunit n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQ85_9RHOD)

HSP 1 Score: 189 bits (480), Expect = 8.750e-52
Identity = 115/283 (40.64%), Postives = 149/283 (52.65%), Query Frame = 0
Query:    1 MLPVSPLAVRLFVARNGL-RNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT-------------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQG 202
            +LPV P  VR  +  +   R ED+ T  L DIVK NN LR  E  G     +R+Q++L+Q+ VA Y+NNE+PG+  AT                                                 L EVGV R+IA NLTYPE+ T +N+  MR+LV N P+ YPGA  I+R++G K+SL Y+++R  V +EVG+KVIRH+ DGD V                               VTSPYNADFDGDEMN+HV ++HQTRAEV E+M VP C +SPQG
Sbjct:  221 LLPVPPPHVRPSIMLDATKRGEDDLTHALADIVKCNNLLRTYEEQGMAQQDIRKQVELLQFKVASYLNNELPGLPRATQGGKTGGKRPLKSISQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLWLDEVGVPRSIAMNLTYPEVVTPFNIERMRELVFNGPDTYPGAKFIERDDGFKMSLGYIANRGDVPLEVGYKVIRHLCDGDVVLFNRQPSLHKMSIMGHRVRVMPYSTFRLNLSVTSPYNADFDGDEMNMHVAETHQTRAEVHEIMKVPRCIVSPQG 503          
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A7S1T799 (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T799_9RHOD)

HSP 1 Score: 181 bits (459), Expect = 5.630e-49
Identity = 119/289 (41.18%), Postives = 151/289 (52.25%), Query Frame = 0
Query:    1 MLPVSPLAVRLFVARNGLRN-EDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGV-------------VTATLH--------------------------------EVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYV-------------------------------VTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQ------GIVSD 206
            +LPV P  VR  +  + +R  ED+ T KLGDI+  N  LR LES G+ +H V EQ+ L+Q+HVA YMNNE+P +             +T  L                                 EVGV R+IA NLT+PE+ T YN   M ++V   P+EYPGA  I+ ++G+K S+ YL D+ +   E+G+KVIRHI DGD V                               VTSPYNADFDGDEMN+HV QSHQTRAE+ ELM VP C +SPQ      GIV D
Sbjct:  219 LLPVPPPHVRPSIMLDPVRRGEDDLTFKLGDIISANLQLRELESRGSASHLVDEQVKLLQFHVATYMNNELPNIPKAMQKGGRPIKSITQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLMPDEVGVPRSIAMNLTFPEVVTPYNYDRMMEVVARGPDEYPGAKYIETDDGQKFSILYLRDKPL---EIGWKVIRHIVDGDVVLFNRQPSLHKMSIMGHRIRVMEHSTFRLNLSVTSPYNADFDGDEMNMHVAQSHQTRAEIFELMSVPRCIVSPQSNKPVMGIVQD 504          
BLAST of Ggra4563.t1 vs. uniprot
Match: A0A6G0V624 (DNA-directed RNA polymerase subunit n=1 Tax=Halicephalobus sp. NKZ332 TaxID=2598192 RepID=A0A6G0V624_9BILA)

HSP 1 Score: 178 bits (451), Expect = 6.890e-48
Identity = 113/289 (39.10%), Postives = 151/289 (52.25%), Query Frame = 0
Query:    1 MLPVSPLAVRLFVARNG-LRNEDERTKKLGDIVKNNNALRVLESTGAVAHTVREQIDLVQYHVAKYMNNEIPGVVTAT---------------------------------------------LHEVGVSRTIAQNLTYPELGTTYNMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVIRHIKDGDYVV-------------------------------TSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSPQ------GIVSD 206
            ++PV PLAVR  V   G  RN+D+ T KL DIVK NN LR  ES GA AH + E + L+QYHVA  ++N+IPG+ TAT                                             +  VGV RTIAQNLT+PEL T +N+  ++++V+     YPGA  I RENG++V L Y    + + ++ G++V RH++DGD VV                               T+PYNADFDGDEMNLH+PQS +TRAE+QE+ +VP   ++PQ      GIV D
Sbjct:  240 VMPVPPLAVRPAVVTFGSARNQDDLTHKLSDIVKTNNQLRKNESQGAAAHIIAEDVKLLQYHVATLVDNQIPGLPTATQKGGRPLKSVKQRLKGKEGRIRGNLMGKRVDFSARTVITPDPNLPIDHVGVPRTIAQNLTFPELVTPFNIDTLQEMVIRGDKSYPGAKYIIRENGERVDLRYHPRAADLHLQPGYRVERHMRDGDIVVFNRQPTLHKMSMMGHKVKVLPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQEIAMVPRQLITPQANKPVMGIVQD 528          
The following BLAST results are available for this feature:
BLAST of Ggra4563.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXL81.530e-8959.50DNA-directed RNA polymerase subunit n=1 Tax=Gracil... [more]
O094512.190e-7853.41DNA-directed RNA polymerase subunit (Fragment) n=1... [more]
Q9AXN16.600e-7753.05DNA-directed RNA polymerase subunit (Fragment) n=1... [more]
R7QLG56.480e-6145.52DNA-directed RNA polymerase subunit n=1 Tax=Chondr... [more]
A0A5J4YJT17.980e-5845.13DNA-directed RNA polymerase subunit n=1 Tax=Porphy... [more]
Q9AXN08.200e-5642.65DNA-directed RNA polymerase subunit n=1 Tax=Glauco... [more]
O041427.120e-5542.65DNA-directed RNA polymerase subunit (Fragment) n=2... [more]
A0A7S3EQ858.750e-5240.64DNA-directed RNA polymerase subunit n=6 Tax=Rhodos... [more]
A0A7S1T7995.630e-4941.18DNA-directed RNA polymerase subunit (Fragment) n=1... [more]
A0A6G0V6246.890e-4839.10DNA-directed RNA polymerase subunit n=1 Tax=Halice... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006592RNA polymerase, N-terminalSMARTSM00663rpolaneu7coord: 1..208
e-value: 3.8E-36
score: 136.1
NoneNo IPR availableGENE3D2.40.40.20coord: 76..160
e-value: 4.4E-19
score: 71.1
NoneNo IPR availableGENE3D2.40.40.20coord: 161..201
e-value: 5.2E-15
score: 57.7
NoneNo IPR availableGENE3D3.30.1490.180RNA polymerase iicoord: 91..153
e-value: 4.4E-19
score: 71.1
NoneNo IPR availablePANTHERPTHR19376:SF55DNA-DIRECTED RNA POLYMERASE SUBUNITcoord: 160..204
coord: 79..160
NoneNo IPR availablePANTHERPTHR19376:SF55DNA-DIRECTED RNA POLYMERASE SUBUNITcoord: 2..79
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 2..201
IPR000722RNA polymerase, alpha subunitPFAMPF00623RNA_pol_Rpb1_2coord: 158..193
e-value: 5.7E-15
score: 55.9
coord: 77..160
e-value: 1.2E-16
score: 61.3
IPR007080RNA polymerase Rpb1, domain 1PFAMPF04997RNA_pol_Rpb1_1coord: 2..91
e-value: 2.2E-16
score: 60.1
IPR045867DNA-directed RNA polymerase, subunit beta-primePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 160..204
IPR045867DNA-directed RNA polymerase, subunit beta-primePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 79..160
IPR045867DNA-directed RNA polymerase, subunit beta-primePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 2..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:1002580..1003571 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4563.t1Ggra4563.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 1002580..1003571 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4563.t1 ID=Ggra4563.t1|Name=Ggra4563.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bp
MLPVSPLAVRLFVARNGLRNEDERTKKLGDIVKNNNALRVLESTGAVAHT
VREQIDLVQYHVAKYMNNEIPGVVTATLHEVGVSRTIAQNLTYPELGTTY
NMAEMRKLVLNRPNEYPGAHSIQRENGKKVSLAYLSDRSMVRVEVGFKVI
RHIKDGDYVVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCGLSP
QGIVSDVTDVTEVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006592RNA_pol_N
IPR000722RNA_pol_asu
IPR007080RNA_pol_Rpb1_1
IPR045867DNA-dir_RpoC_beta_prime