Ggra4486.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4486.t1
Unique NameGgra4486.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length303
Homology
The following BLAST results are available for this feature:
BLAST of Ggra4486.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 215..237
e-value: 11.0
score: 13.1
coord: 169..192
e-value: 0.014
score: 24.6
coord: 238..261
e-value: 18.0
score: 11.1
coord: 193..214
e-value: 160.0
score: 3.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 132..287
e-value: 3.0E-27
score: 96.8
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 149..205
e-value: 2.1E-7
score: 30.6
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 171..192
score: 7.296117
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 149..261
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 145..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:622750..623658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4486.t1Ggra4486.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 622750..623658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4486.t1 ID=Ggra4486.t1|Name=Ggra4486.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=303bp
MRCQRHAPAATARATGSPTSPACRRAVQFAAQLRSLPVALRPPTPRAPAV
AMQPPPSQLPLAEPQRFDWTNLPADVKQLILDAVSLPSLLHKLQQVFPRD
APLCVHTRIAALSELWRAWVVSPIDVRNVPSFRTQHARRACLPTQFCFLR
RLVLGSSSFRRLPVAITEFVELRVLHLDHNHLQQLPDCISACSSLVLLDL
SHNHFRAIPPVVLRLPSLKNLNLEHNPLETLPVQITTIPRLNTLVLNSCR
LTFLPSELLQLVQRADDFTLQVSNNRFPRHYILELTRSFPGLRYKLVHVM
YE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt