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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 130081.XP_005703235.1 |
| Preferred name | AMPD2 |
| PFAMs | A_deaminase |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00477 |
| KEGG ko | ko:K01490 |
| KEGG Reaction | R00181 |
| KEGG Pathway | ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 |
| GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 |
| Evalue | 7.57e-264 |
| EggNOG OGs | COG1816@1|root,KOG1096@2759|Eukaryota |
| EC | 3.5.4.6 |
| Description | adenosine-phosphate deaminase activity |
| COG category | F |
| BRITE | ko00000,ko00001,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| Ggra9916.t1.start1 | Ggra9916.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000887_pilon 85554..85556 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra9916.t1 ID=Ggra9916.t1|Name=Ggra9916.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=760bp
MQAARPNSAPLGAEQREHGASATIGTPTADEDTLATATLDHRRSSMRSAA
ANFKRLAPQSPTHYRRLSIAPAARSPPERVAASKLCAAVALRERWLYRRT
VPEWRAFQSCAPPSPSPSQSHSVLVDPPYDPFAPPPSPPTAHLFRWHAGV
VSVYADADALHKHTALVEGTTLARFANDLVMLSAIMNDPDTRSFCHRRLV
FLQERFNMYILLNDNQERLAQIAVPHRDFYNVSKVDVHVHHSSMANQKHF
LTFIKRKVKSHGDEKVLANRDHPDGEPLTLTQVFNSLNLEPHELSVDTLD
VHADNSTFHRFDRFNLKYNPFGQSRLREIFMKTDNYIKGKYMAELTKQVF
SDLRSTKYQNSEYRISIYGRDIKEWDKLADWFQDHKIFSPNVRWLIQIPR
LYNIYKEMGRLNSFQDMLNNIFNPLFEATVDPTSHPKVASLLQQIVGFDS
VDDESQPQPRVDLRKCGPPQTWNSKENPPYSYYSFFIYSNLAVLNQLRES
KGLNTFTYRPHAGEAGDIDHLATSFLLAHGINHGLNLKKSPVLQYLFYLT
QIGVAMSPLSNNALFCEITKNPLPSFFKRGLNVTLSTDDPLQFAFTREPL
MEEYSVAAQVWKLSNTDLCELARNSVLQSGFEPCVKANWLGSTWYLSGQA
GNDISKTNVPSIRLCYRYETLLEELKIIYNGHVPNDIHVLPTFSHKTGNK
TTPQTGHDDERKHRVQFEAQAKSPFGNGPMQVEPFQHVDGFDAAGLSEDE
EVILDEDEV* back to topspliced messenger RNA >Ggra9916.t1 ID=Ggra9916.t1|Name=Ggra9916.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2280bp|location=Sequence derived from alignment at tig00000887_pilon:83277..85556- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGCAAGCGGCGCGCCCAAATTCGGCGCCGCTCGGCGCGGAGCAGCGCGA
GCACGGCGCGTCGGCCACAATCGGCACGCCCACGGCCGATGAAGACACGC
TGGCCACGGCCACTCTGGACCACCGTCGCTCGTCCATGCGCTCCGCCGCC
GCCAACTTCAAGCGCCTTGCGCCGCAGTCGCCCACGCACTACCGCCGTCT
CAGCATTGCGCCGGCCGCGCGCTCGCCGCCGGAGCGCGTGGCCGCCTCCA
AGCTGTGCGCCGCCGTCGCGCTGCGTGAGCGCTGGCTCTACCGCCGCACC
GTGCCCGAGTGGCGCGCCTTTCAGTCATGTGCGCCGCCTTCGCCGTCGCC
GTCGCAGTCGCACTCCGTGCTGGTCGACCCGCCTTATGACCCGTTTGCCC
CCCCGCCTTCCCCGCCTACGGCCCACCTGTTTCGCTGGCATGCTGGCGTT
GTTAGCGTGTATGCTGATGCCGATGCGCTGCACAAACACACCGCGCTCGT
GGAGGGTACCACGCTGGCGCGCTTTGCAAACGACCTGGTCATGTTGTCCG
CCATCATGAACGACCCGGACACGCGCTCATTTTGTCACCGCCGCCTCGTC
TTCTTGCAGGAGCGCTTCAACATGTACATTTTGCTCAACGACAACCAGGA
GCGATTGGCGCAGATTGCCGTCCCGCACCGTGACTTTTACAACGTCAGCA
AGGTCGATGTTCACGTTCATCACTCCTCCATGGCCAACCAAAAGCACTTT
CTCACCTTTATCAAGCGCAAGGTCAAGAGCCACGGCGATGAGAAGGTGCT
TGCCAACCGTGACCACCCTGACGGCGAGCCTTTGACCCTTACGCAGGTCT
TCAACTCACTCAACCTTGAACCTCACGAACTCAGCGTTGATACGCTTGAT
GTGCATGCCGATAACTCCACCTTCCATAGATTCGACCGCTTCAACCTCAA
GTACAACCCTTTTGGACAGTCCAGATTGCGTGAGATCTTCATGAAGACCG
ACAATTACATCAAGGGCAAGTATATGGCAGAACTCACAAAGCAGGTCTTT
TCCGATCTGCGCAGCACAAAGTACCAGAACAGCGAGTACCGCATTAGCAT
TTACGGTAGGGATATCAAAGAGTGGGATAAACTTGCCGACTGGTTCCAAG
ATCACAAGATATTCAGTCCCAATGTGCGTTGGCTCATCCAAATTCCACGT
CTATACAACATCTACAAGGAGATGGGAAGGCTAAACTCCTTCCAGGACAT
GTTGAACAACATCTTCAACCCCCTTTTTGAAGCTACTGTGGACCCAACCT
CGCACCCCAAAGTCGCAAGCCTTTTGCAGCAGATTGTCGGATTCGATTCT
GTGGATGACGAGAGTCAGCCACAGCCACGAGTGGATCTCAGAAAGTGTGG
ACCTCCGCAAACATGGAATAGCAAGGAAAATCCACCGTATAGCTACTATT
CGTTCTTCATTTATAGCAACCTTGCTGTGTTGAATCAACTGCGAGAGTCC
AAGGGCCTCAACACCTTCACATATCGTCCACACGCGGGTGAGGCTGGCGA
CATTGATCATCTTGCCACATCATTTCTTCTGGCGCATGGCATCAATCACG
GCCTCAATCTCAAAAAGAGTCCGGTGTTACAGTATTTGTTCTACCTCACG
CAGATCGGAGTGGCGATGAGTCCGTTGAGCAATAACGCTCTGTTTTGCGA
AATTACCAAGAACCCATTGCCGTCCTTCTTCAAACGCGGTCTCAACGTAA
CGCTGTCCACCGATGATCCGCTGCAGTTTGCATTCACGCGCGAACCGCTC
ATGGAGGAGTATTCAGTTGCGGCGCAGGTGTGGAAGCTGTCAAATACCGA
TTTATGTGAGCTAGCGCGAAATTCTGTATTGCAATCTGGATTTGAACCGT
GCGTCAAGGCGAACTGGTTGGGGTCCACTTGGTATCTCAGCGGCCAAGCA
GGAAATGACATCTCAAAGACAAATGTTCCATCAATTCGACTTTGCTACCG
GTACGAGACTCTTCTAGAAGAACTCAAGATTATATACAACGGACACGTGC
CGAATGATATTCATGTGTTGCCGACTTTCTCGCATAAAACGGGCAACAAA
ACGACGCCTCAAACTGGTCATGATGATGAGCGAAAACACCGCGTTCAGTT
TGAGGCTCAGGCCAAGAGCCCTTTTGGCAACGGCCCCATGCAAGTGGAAC
CTTTCCAGCACGTTGATGGTTTTGACGCGGCTGGGTTGTCAGAGGATGAA
GAGGTCATTCTCGATGAAGATGAGGTGTAG back to topprotein sequence of Ggra9916.t1 >Ggra9916.t1 ID=Ggra9916.t1|Name=Ggra9916.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=760bp
MQAARPNSAPLGAEQREHGASATIGTPTADEDTLATATLDHRRSSMRSAA
ANFKRLAPQSPTHYRRLSIAPAARSPPERVAASKLCAAVALRERWLYRRT
VPEWRAFQSCAPPSPSPSQSHSVLVDPPYDPFAPPPSPPTAHLFRWHAGV
VSVYADADALHKHTALVEGTTLARFANDLVMLSAIMNDPDTRSFCHRRLV
FLQERFNMYILLNDNQERLAQIAVPHRDFYNVSKVDVHVHHSSMANQKHF
LTFIKRKVKSHGDEKVLANRDHPDGEPLTLTQVFNSLNLEPHELSVDTLD
VHADNSTFHRFDRFNLKYNPFGQSRLREIFMKTDNYIKGKYMAELTKQVF
SDLRSTKYQNSEYRISIYGRDIKEWDKLADWFQDHKIFSPNVRWLIQIPR
LYNIYKEMGRLNSFQDMLNNIFNPLFEATVDPTSHPKVASLLQQIVGFDS
VDDESQPQPRVDLRKCGPPQTWNSKENPPYSYYSFFIYSNLAVLNQLRES
KGLNTFTYRPHAGEAGDIDHLATSFLLAHGINHGLNLKKSPVLQYLFYLT
QIGVAMSPLSNNALFCEITKNPLPSFFKRGLNVTLSTDDPLQFAFTREPL
MEEYSVAAQVWKLSNTDLCELARNSVLQSGFEPCVKANWLGSTWYLSGQA
GNDISKTNVPSIRLCYRYETLLEELKIIYNGHVPNDIHVLPTFSHKTGNK
TTPQTGHDDERKHRVQFEAQAKSPFGNGPMQVEPFQHVDGFDAAGLSEDE
EVILDEDEV* back to topmRNA from alignment at tig00000887_pilon:83277..85556- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra9916.t1 ID=Ggra9916.t1|Name=Ggra9916.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2280bp|location=Sequence derived from alignment at tig00000887_pilon:83277..85556- (Gracilaria gracilis GNS1m male)
ATGCAAGCGGCGCGCCCAAATTCGGCGCCGCTCGGCGCGGAGCAGCGCGA
GCACGGCGCGTCGGCCACAATCGGCACGCCCACGGCCGATGAAGACACGC
TGGCCACGGCCACTCTGGACCACCGTCGCTCGTCCATGCGCTCCGCCGCC
GCCAACTTCAAGCGCCTTGCGCCGCAGTCGCCCACGCACTACCGCCGTCT
CAGCATTGCGCCGGCCGCGCGCTCGCCGCCGGAGCGCGTGGCCGCCTCCA
AGCTGTGCGCCGCCGTCGCGCTGCGTGAGCGCTGGCTCTACCGCCGCACC
GTGCCCGAGTGGCGCGCCTTTCAGTCATGTGCGCCGCCTTCGCCGTCGCC
GTCGCAGTCGCACTCCGTGCTGGTCGACCCGCCTTATGACCCGTTTGCCC
CCCCGCCTTCCCCGCCTACGGCCCACCTGTTTCGCTGGCATGCTGGCGTT
GTTAGCGTGTATGCTGATGCCGATGCGCTGCACAAACACACCGCGCTCGT
GGAGGGTACCACGCTGGCGCGCTTTGCAAACGACCTGGTCATGTTGTCCG
CCATCATGAACGACCCGGACACGCGCTCATTTTGTCACCGCCGCCTCGTC
TTCTTGCAGGAGCGCTTCAACATGTACATTTTGCTCAACGACAACCAGGA
GCGATTGGCGCAGATTGCCGTCCCGCACCGTGACTTTTACAACGTCAGCA
AGGTCGATGTTCACGTTCATCACTCCTCCATGGCCAACCAAAAGCACTTT
CTCACCTTTATCAAGCGCAAGGTCAAGAGCCACGGCGATGAGAAGGTGCT
TGCCAACCGTGACCACCCTGACGGCGAGCCTTTGACCCTTACGCAGGTCT
TCAACTCACTCAACCTTGAACCTCACGAACTCAGCGTTGATACGCTTGAT
GTGCATGCCGATAACTCCACCTTCCATAGATTCGACCGCTTCAACCTCAA
GTACAACCCTTTTGGACAGTCCAGATTGCGTGAGATCTTCATGAAGACCG
ACAATTACATCAAGGGCAAGTATATGGCAGAACTCACAAAGCAGGTCTTT
TCCGATCTGCGCAGCACAAAGTACCAGAACAGCGAGTACCGCATTAGCAT
TTACGGTAGGGATATCAAAGAGTGGGATAAACTTGCCGACTGGTTCCAAG
ATCACAAGATATTCAGTCCCAATGTGCGTTGGCTCATCCAAATTCCACGT
CTATACAACATCTACAAGGAGATGGGAAGGCTAAACTCCTTCCAGGACAT
GTTGAACAACATCTTCAACCCCCTTTTTGAAGCTACTGTGGACCCAACCT
CGCACCCCAAAGTCGCAAGCCTTTTGCAGCAGATTGTCGGATTCGATTCT
GTGGATGACGAGAGTCAGCCACAGCCACGAGTGGATCTCAGAAAGTGTGG
ACCTCCGCAAACATGGAATAGCAAGGAAAATCCACCGTATAGCTACTATT
CGTTCTTCATTTATAGCAACCTTGCTGTGTTGAATCAACTGCGAGAGTCC
AAGGGCCTCAACACCTTCACATATCGTCCACACGCGGGTGAGGCTGGCGA
CATTGATCATCTTGCCACATCATTTCTTCTGGCGCATGGCATCAATCACG
GCCTCAATCTCAAAAAGAGTCCGGTGTTACAGTATTTGTTCTACCTCACG
CAGATCGGAGTGGCGATGAGTCCGTTGAGCAATAACGCTCTGTTTTGCGA
AATTACCAAGAACCCATTGCCGTCCTTCTTCAAACGCGGTCTCAACGTAA
CGCTGTCCACCGATGATCCGCTGCAGTTTGCATTCACGCGCGAACCGCTC
ATGGAGGAGTATTCAGTTGCGGCGCAGGTGTGGAAGCTGTCAAATACCGA
TTTATGTGAGCTAGCGCGAAATTCTGTATTGCAATCTGGATTTGAACCGT
GCGTCAAGGCGAACTGGTTGGGGTCCACTTGGTATCTCAGCGGCCAAGCA
GGAAATGACATCTCAAAGACAAATGTTCCATCAATTCGACTTTGCTACCG
GTACGAGACTCTTCTAGAAGAACTCAAGATTATATACAACGGACACGTGC
CGAATGATATTCATGTGTTGCCGACTTTCTCGCATAAAACGGGCAACAAA
ACGACGCCTCAAACTGGTCATGATGATGAGCGAAAACACCGCGTTCAGTT
TGAGGCTCAGGCCAAGAGCCCTTTTGGCAACGGCCCCATGCAAGTGGAAC
CTTTCCAGCACGTTGATGGTTTTGACGCGGCTGGGTTGTCAGAGGATGAA
GAGGTCATTCTCGATGAAGATGAGGTGTAG back to topCoding sequence (CDS) from alignment at tig00000887_pilon:83277..85556- >Ggra9916.t1 ID=Ggra9916.t1|Name=Ggra9916.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2280bp|location=Sequence derived from alignment at tig00000887_pilon:83277..85556- (Gracilaria gracilis GNS1m male)
ATGCAAGCGGCGCGCCCAAATTCGGCGCCGCTCGGCGCGGAGCAGCGCGA
GCACGGCGCGTCGGCCACAATCGGCACGCCCACGGCCGATGAAGACACGC
TGGCCACGGCCACTCTGGACCACCGTCGCTCGTCCATGCGCTCCGCCGCC
GCCAACTTCAAGCGCCTTGCGCCGCAGTCGCCCACGCACTACCGCCGTCT
CAGCATTGCGCCGGCCGCGCGCTCGCCGCCGGAGCGCGTGGCCGCCTCCA
AGCTGTGCGCCGCCGTCGCGCTGCGTGAGCGCTGGCTCTACCGCCGCACC
GTGCCCGAGTGGCGCGCCTTTCAGTCATGTGCGCCGCCTTCGCCGTCGCC
GTCGCAGTCGCACTCCGTGCTGGTCGACCCGCCTTATGACCCGTTTGCCC
CCCCGCCTTCCCCGCCTACGGCCCACCTGTTTCGCTGGCATGCTGGCGTT
GTTAGCGTGTATGCTGATGCCGATGCGCTGCACAAACACACCGCGCTCGT
GGAGGGTACCACGCTGGCGCGCTTTGCAAACGACCTGGTCATGTTGTCCG
CCATCATGAACGACCCGGACACGCGCTCATTTTGTCACCGCCGCCTCGTC
TTCTTGCAGGAGCGCTTCAACATGTACATTTTGCTCAACGACAACCAGGA
GCGATTGGCGCAGATTGCCGTCCCGCACCGTGACTTTTACAACGTCAGCA
AGGTCGATGTTCACGTTCATCACTCCTCCATGGCCAACCAAAAGCACTTT
CTCACCTTTATCAAGCGCAAGGTCAAGAGCCACGGCGATGAGAAGGTGCT
TGCCAACCGTGACCACCCTGACGGCGAGCCTTTGACCCTTACGCAGGTCT
TCAACTCACTCAACCTTGAACCTCACGAACTCAGCGTTGATACGCTTGAT
GTGCATGCCGATAACTCCACCTTCCATAGATTCGACCGCTTCAACCTCAA
GTACAACCCTTTTGGACAGTCCAGATTGCGTGAGATCTTCATGAAGACCG
ACAATTACATCAAGGGCAAGTATATGGCAGAACTCACAAAGCAGGTCTTT
TCCGATCTGCGCAGCACAAAGTACCAGAACAGCGAGTACCGCATTAGCAT
TTACGGTAGGGATATCAAAGAGTGGGATAAACTTGCCGACTGGTTCCAAG
ATCACAAGATATTCAGTCCCAATGTGCGTTGGCTCATCCAAATTCCACGT
CTATACAACATCTACAAGGAGATGGGAAGGCTAAACTCCTTCCAGGACAT
GTTGAACAACATCTTCAACCCCCTTTTTGAAGCTACTGTGGACCCAACCT
CGCACCCCAAAGTCGCAAGCCTTTTGCAGCAGATTGTCGGATTCGATTCT
GTGGATGACGAGAGTCAGCCACAGCCACGAGTGGATCTCAGAAAGTGTGG
ACCTCCGCAAACATGGAATAGCAAGGAAAATCCACCGTATAGCTACTATT
CGTTCTTCATTTATAGCAACCTTGCTGTGTTGAATCAACTGCGAGAGTCC
AAGGGCCTCAACACCTTCACATATCGTCCACACGCGGGTGAGGCTGGCGA
CATTGATCATCTTGCCACATCATTTCTTCTGGCGCATGGCATCAATCACG
GCCTCAATCTCAAAAAGAGTCCGGTGTTACAGTATTTGTTCTACCTCACG
CAGATCGGAGTGGCGATGAGTCCGTTGAGCAATAACGCTCTGTTTTGCGA
AATTACCAAGAACCCATTGCCGTCCTTCTTCAAACGCGGTCTCAACGTAA
CGCTGTCCACCGATGATCCGCTGCAGTTTGCATTCACGCGCGAACCGCTC
ATGGAGGAGTATTCAGTTGCGGCGCAGGTGTGGAAGCTGTCAAATACCGA
TTTATGTGAGCTAGCGCGAAATTCTGTATTGCAATCTGGATTTGAACCGT
GCGTCAAGGCGAACTGGTTGGGGTCCACTTGGTATCTCAGCGGCCAAGCA
GGAAATGACATCTCAAAGACAAATGTTCCATCAATTCGACTTTGCTACCG
GTACGAGACTCTTCTAGAAGAACTCAAGATTATATACAACGGACACGTGC
CGAATGATATTCATGTGTTGCCGACTTTCTCGCATAAAACGGGCAACAAA
ACGACGCCTCAAACTGGTCATGATGATGAGCGAAAACACCGCGTTCAGTT
TGAGGCTCAGGCCAAGAGCCCTTTTGGCAACGGCCCCATGCAAGTGGAAC
CTTTCCAGCACGTTGATGGTTTTGACGCGGCTGGGTTGTCAGAGGATGAA
GAGGTCATTCTCGATGAAGATGAGGTGTAG back to top
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