Ggra6247.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6247.t1
Unique NameGgra6247.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Homology
BLAST of Ggra6247.t1 vs. uniprot
Match: A0A2V3IIA9 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIA9_9FLOR)

HSP 1 Score: 188 bits (478), Expect = 3.460e-56
Identity = 97/175 (55.43%), Postives = 125/175 (71.43%), Query Frame = 0
Query:    1 MTKSVTQDVNNLLVDPTIFTHSPAEIVKVIQEALDGQVTKDYYSLNTQASNLRHTGTISDYINQHTAIRRKQIIAQAPGIADERVTVNFILQGLVDDDRFANRAITLMLDTPPMTIKDAQHRLEQYESLTTQQASNATVQMSINASYPRSQTCNIPYR-RGRGRARYGGASNHSL 174
            +TKS+TQDV ++L DPT+F HSPA IV  IQ  +D Q  K+Y+SL T+A +LR TGTI +YI  H AIRRKQI A  PG++DERVT+N+ILQGLV+D RF+ RA+TLMLDTPP TI + QHRLEQYES+  QQ   +    ++  + P ++  + PYR R RGR RYG +    L
Sbjct:   64 ITKSITQDVGDMLADPTLFNHSPAAIVHGIQRVIDSQSAKNYFSLTTEAMSLRRTGTILEYIASHLAIRRKQISANTPGVSDERVTINYILQGLVNDHRFSQRAVTLMLDTPPTTISETQHRLEQYESILNQQEPTSHQFHAVTQTLPTTRLSH-PYRGRSRGRGRYGQSRGRGL 237          
BLAST of Ggra6247.t1 vs. uniprot
Match: A0A2V3IWS2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWS2_9FLOR)

HSP 1 Score: 169 bits (428), Expect = 3.360e-48
Identity = 95/221 (42.99%), Postives = 141/221 (63.80%), Query Frame = 0
Query:    1 MTKSVTQDVNNLLVDPTIFTHSPAEIVKVIQEALDGQVTKDYYSLNTQASNLRHTGTISDYINQHTAIRRKQIIAQAPGIADERVTVNFILQGLVDDDRFANRAITLMLDTPPMTIKDAQHRLEQYESLTTQQASN-ATVQMSINASYPRSQTCNIPYRRGRGRARYGGASNHSLRNAIADLTKKIDGLQTAKPRRGRGGSAAKQASSSHDAIASEIIEAM 220
            +TKS+ Q+V +LLVD  I T  P  IV+ I++ ++     +Y+SL T+  NL  T +I+++I  H AI RKQI+A  P + +ERV +N+ILQGLV+D R + RA+++MLD+PP+ IKD QHRLEQYES+  QQ      V    + +   +Q  +    RG G   Y       +++ I +L K++D LQT + R GRG S AKQA S++DA ++EI++AM
Sbjct:   54 ITKSIMQEVTDLLVDINILTRKPQLIVQTIRQTIESHSATNYFSLTTEDLNLIRTESIAEFILAHLAIHRKQIVANTPVVYNERVKINYILQGLVNDRRVSQRALSVMLDSPPIKIKDKQHRLEQYESIFNQQTPMPGLVPFMGHTNGGSAQNLSGTRGRGLGCGGYSSFGGRGIQHTIEELNKEMDALQTTESRCGRGCSTAKQACSTNDATSAEIVQAM 274          
BLAST of Ggra6247.t1 vs. uniprot
Match: A0A2V3IQ93 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ93_9FLOR)

HSP 1 Score: 107 bits (267), Expect = 1.240e-25
Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    1 MTKSVTQDVNNLLVDPTIFTHSPAEIVKVIQEALDGQVTKDYYSLNTQASNLRHTGTISDYINQHTAIRRKQIIAQAPGIADERVTVN 88
            +TKS+TQDV+++L DPT+F  SPA IV  IQ  +D Q +K+Y+SL T+A  LR TGTIS+YI  H AI RKQI A  PGI DERVT+N
Sbjct:   64 ITKSITQDVSDMLADPTLFNQSPAAIVHGIQRVIDSQSSKNYFSLTTEAMKLRRTGTISEYIASHLAICRKQISANTPGIFDERVTIN 151          
The following BLAST results are available for this feature:
BLAST of Ggra6247.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IIA93.460e-5655.43Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IWS23.360e-4842.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQ931.240e-2560.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 171..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..247

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:223663..224522 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6247.t1Ggra6247.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 223663..224522 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6247.t1 ID=Ggra6247.t1|Name=Ggra6247.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MTKSVTQDVNNLLVDPTIFTHSPAEIVKVIQEALDGQVTKDYYSLNTQAS
NLRHTGTISDYINQHTAIRRKQIIAQAPGIADERVTVNFILQGLVDDDRF
ANRAITLMLDTPPMTIKDAQHRLEQYESLTTQQASNATVQMSINASYPRS
QTCNIPYRRGRGRARYGGASNHSLRNAIADLTKKIDGLQTAKPRRGRGGS
AAKQASSSHDAIASEIIEAMQALEHATTDDTPDVQQQEEEGNTEPNQ*
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