Ggra1020.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1020.t1
Unique NameGgra1020.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length137
Homology
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: A0A2V3INU8 (Histone H3 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2V3INU8_9FLOR)

HSP 1 Score: 252 bits (644), Expect = 1.190e-84
Identity = 135/136 (99.26%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQ SAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: G9I117 (Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=G9I117_9CHLO)

HSP 1 Score: 248 bits (632), Expect = 8.050e-83
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQDYK+DLRFQ SAVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: R7QCI8 (Histone H3 n=3 Tax=Eukaryota TaxID=2759 RepID=R7QCI8_CHOCR)

HSP 1 Score: 248 bits (632), Expect = 8.050e-83
Identity = 131/136 (96.32%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPA+GGVKKPHR+RPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQD+KSDLRFQ SAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: A0A8D1X0H7 (Histone H3 n=5 Tax=Eukaryota TaxID=2759 RepID=A0A8D1X0H7_PIG)

HSP 1 Score: 246 bits (628), Expect = 3.280e-82
Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: A0A6J0UZS0 (Histone H3 n=35 Tax=Eukaryota TaxID=2759 RepID=A0A6J0UZS0_9SAUR)

HSP 1 Score: 246 bits (628), Expect = 3.280e-82
Identity = 129/136 (94.85%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQD+KSDLRFQ SAV+ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKSDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: E1ZFV1 (Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=E1ZFV1_CHLVA)

HSP 1 Score: 246 bits (627), Expect = 4.660e-82
Identity = 129/136 (94.85%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: W4GZ05 (Histone H3 n=37 Tax=Oomycota TaxID=4762 RepID=W4GZ05_9STRA)

HSP 1 Score: 246 bits (627), Expect = 4.660e-82
Identity = 128/136 (94.12%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR++QKSTELLIRKLPFQRLVREIAQD+K+DLRFQGSAVLALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGER+
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQGSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERS 136
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: A0A7I4FN51 (Histone domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4FN51_PHYPA)

HSP 1 Score: 247 bits (630), Expect = 6.230e-82
Identity = 130/136 (95.59%), Postives = 135/136 (99.26%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: A0A251SSA9 (Histone H3 n=9 Tax=asterids TaxID=71274 RepID=A0A251SSA9_HELAN)

HSP 1 Score: 245 bits (626), Expect = 6.620e-82
Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERA 136
[Close]
BLAST of Ggra1020.t1 vs. uniprot
Match: A0A5N6N813 (Histone H3 n=3 Tax=Asteroideae TaxID=102804 RepID=A0A5N6N813_9ASTR)

HSP 1 Score: 245 bits (626), Expect = 9.250e-82
Identity = 130/136 (95.59%), Postives = 134/136 (98.53%), Query Frame = 0 
Query:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
            MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRK+QKSTELLIRKLPFQRLVREIAQD+K+DLRFQ SAV ALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct:   11 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERA 146
The following BLAST results are available for this feature:
BLAST of Ggra1020.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INU81.190e-8499.26Histone H3 n=2 Tax=Eukaryota TaxID=2759 RepID=A0A2... [more]
G9I1178.050e-8396.32Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=G9I... [more]
R7QCI88.050e-8396.32Histone H3 n=3 Tax=Eukaryota TaxID=2759 RepID=R7QC... [more]
A0A8D1X0H73.280e-8295.59Histone H3 n=5 Tax=Eukaryota TaxID=2759 RepID=A0A8... [more]
A0A6J0UZS03.280e-8294.85Histone H3 n=35 Tax=Eukaryota TaxID=2759 RepID=A0A... [more]
E1ZFV14.660e-8294.85Histone H3 n=11 Tax=Eukaryota TaxID=2759 RepID=E1Z... [more]
W4GZ054.660e-8294.12Histone H3 n=37 Tax=Oomycota TaxID=4762 RepID=W4GZ... [more]
A0A7I4FN516.230e-8295.59Histone domain-containing protein n=1 Tax=Physcomi... [more]
A0A251SSA96.620e-8295.59Histone H3 n=9 Tax=asterids TaxID=71274 RepID=A0A2... [more]
A0A5N6N8139.250e-8295.59Histone H3 n=3 Tax=Asteroideae TaxID=102804 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 34..55
score: 85.28
coord: 80..98
score: 77.57
coord: 98..114
score: 96.93
coord: 114..135
score: 91.21
coord: 3..17
score: 97.1
coord: 17..31
score: 92.32
coord: 58..75
score: 97.46
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 34..136
e-value: 3.5E-71
score: 252.5
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 1..136
IPR000164Histone H3/CENP-APROSITEPS00959HISTONE_H3_2coord: 67..75
IPR000164Histone H3/CENP-APROSITEPS00322HISTONE_H3_1coord: 15..21
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 1..132
e-value: 2.2E-51
score: 173.6
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..136
e-value: 1.3E-73
score: 247.2
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availablePANTHERPTHR11426:SF198SUBFAMILY NOT NAMEDcoord: 1..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:594530..594940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1020.t1Ggra1020.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 594530..594940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1020.t1 ID=Ggra1020.t1|Name=Ggra1020.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=137bp
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALR
EIRKFQKSTELLIRKLPFQRLVREIAQDYKSDLRFQGSAVLALQEASEAY
LVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000164Histone_H3/CENP-A
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold