Ggra979.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra979.t1
Unique NameGgra979.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length382
Homology
The following BLAST results are available for this feature:
BLAST of Ggra979.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01228EGGSHELLcoord: 184..199
score: 39.84
coord: 209..219
score: 45.45
coord: 123..134
score: 36.46
coord: 237..255
score: 40.79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..292
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:45291..46436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra979.t1Ggra979.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 45291..46436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra979.t1 ID=Ggra979.t1|Name=Ggra979.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=382bp
MRVGVIVVLACLLLASDYKPVSSAPIPSSTYSHEYPTPDTVRMKKEPVDG
YKRPPKDGRDGRDGRDGRNGKPGKPGKPGKPGKRGGEGGDGGDGGAGSDG
APGGAGGSGGAGSGTAPGGDGGDGGAGGASAPGGDGGEGGDGFVGGEGGD
GGMGGTSFTDDGGDGGKGGEGGNGVVAGEGGDGGNGGHSAVADGGDGGDG
GSGGDGILGGGGGDGGGGGIGLGGEGGSGGTGGEGGGGALPGDGGNGGNG
GPGLIGGPGGDGGDVGEQFSDEKAIEVATDAVSMNAKDEKEKKTPKSVIK
GGSERFEKKLTKKVTKKVKKGEKKVVKSQKVVTKTVKKSEKKVVKKKRVV
EKTVKKTEKKFVKKTNTMTNKVTIAPKTTVY*
back to top