Ggra979.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra979.t1
Unique NameGgra979.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length382
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:45291..46436 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra979Ggra979Gracilaria gracilis GNS1m malegenetig00000027_pilon 45291..46436 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra979.t1.stop1Ggra979.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000027_pilon 45291..45293 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra979.t1.CDS1Ggra979.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000027_pilon 45291..46436 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra979.t1.exon1Ggra979.t1.exon1Gracilaria gracilis GNS1m maleexontig00000027_pilon 45291..46436 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra979.t1.start1Ggra979.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000027_pilon 46434..46436 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra979.t1Ggra979.t1Gracilaria gracilis GNS1m malepolypeptidetig00000027_pilon 45291..46436 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra979.t1 ID=Ggra979.t1|Name=Ggra979.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=382bp
MRVGVIVVLACLLLASDYKPVSSAPIPSSTYSHEYPTPDTVRMKKEPVDG
YKRPPKDGRDGRDGRDGRNGKPGKPGKPGKPGKRGGEGGDGGDGGAGSDG
APGGAGGSGGAGSGTAPGGDGGDGGAGGASAPGGDGGEGGDGFVGGEGGD
GGMGGTSFTDDGGDGGKGGEGGNGVVAGEGGDGGNGGHSAVADGGDGGDG
GSGGDGILGGGGGDGGGGGIGLGGEGGSGGTGGEGGGGALPGDGGNGGNG
GPGLIGGPGGDGGDVGEQFSDEKAIEVATDAVSMNAKDEKEKKTPKSVIK
GGSERFEKKLTKKVTKKVKKGEKKVVKSQKVVTKTVKKSEKKVVKKKRVV
EKTVKKTEKKFVKKTNTMTNKVTIAPKTTVY*
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spliced messenger RNA

>Ggra979.t1 ID=Ggra979.t1|Name=Ggra979.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1146bp|location=Sequence derived from alignment at tig00000027_pilon:45291..46436- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCGTGTCGGAGTGATCGTCGTGTTGGCTTGCCTCCTTTTGGCATCTGA
TTACAAGCCAGTATCCAGTGCACCGATCCCATCATCCACGTACAGCCATG
AATACCCGACCCCAGACACCGTCAGAATGAAGAAGGAGCCAGTGGACGGA
TACAAGCGCCCGCCGAAGGACGGCAGAGATGGCAGAGACGGCAGAGACGG
CCGGAATGGAAAACCCGGGAAGCCCGGAAAGCCTGGAAAGCCTGGAAAGC
GAGGCGGAGAGGGAGGAGATGGAGGTGACGGAGGGGCGGGCAGCGATGGT
GCCCCCGGCGGCGCCGGCGGGAGTGGCGGCGCTGGCAGCGGTACTGCACC
GGGTGGAGACGGTGGTGATGGGGGTGCAGGGGGTGCAAGCGCTCCAGGAG
GTGATGGTGGAGAAGGAGGTGACGGGTTTGTCGGTGGGGAAGGAGGCGAT
GGTGGTATGGGAGGAACTTCGTTCACTGATGATGGCGGGGACGGCGGCAA
AGGAGGGGAGGGGGGAAATGGGGTGGTTGCGGGCGAAGGAGGGGATGGTG
GGAATGGTGGACATTCTGCTGTCGCGGATGGGGGAGATGGCGGAGACGGG
GGTTCAGGAGGGGATGGGATTCTTGGGGGTGGTGGTGGGGATGGTGGAGG
TGGTGGGATTGGTCTCGGCGGTGAAGGAGGTTCTGGGGGTACTGGTGGTG
AGGGCGGTGGTGGTGCTCTGCCTGGGGATGGTGGGAACGGGGGAAATGGT
GGACCTGGGTTGATTGGAGGACCAGGTGGGGATGGTGGTGATGTGGGAGA
ACAGTTTAGTGATGAAAAAGCTATTGAAGTGGCTACCGATGCGGTTTCAA
TGAATGCGAAGGACGAGAAGGAAAAGAAGACTCCAAAGAGTGTGATTAAG
GGTGGTTCAGAGAGGTTTGAGAAAAAGTTGACGAAGAAAGTCACTAAGAA
GGTGAAGAAGGGTGAGAAGAAGGTGGTGAAATCGCAGAAGGTGGTGACTA
AGACAGTGAAGAAGTCCGAAAAGAAGGTGGTAAAGAAGAAGAGGGTGGTG
GAGAAAACGGTGAAGAAGACGGAAAAGAAATTCGTGAAGAAGACAAACAC
AATGACGAACAAGGTGACCATTGCGCCGAAGACGACCGTGTATTGA
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protein sequence of Ggra979.t1

>Ggra979.t1 ID=Ggra979.t1|Name=Ggra979.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=382bp
MRVGVIVVLACLLLASDYKPVSSAPIPSSTYSHEYPTPDTVRMKKEPVDG
YKRPPKDGRDGRDGRDGRNGKPGKPGKPGKPGKRGGEGGDGGDGGAGSDG
APGGAGGSGGAGSGTAPGGDGGDGGAGGASAPGGDGGEGGDGFVGGEGGD
GGMGGTSFTDDGGDGGKGGEGGNGVVAGEGGDGGNGGHSAVADGGDGGDG
GSGGDGILGGGGGDGGGGGIGLGGEGGSGGTGGEGGGGALPGDGGNGGNG
GPGLIGGPGGDGGDVGEQFSDEKAIEVATDAVSMNAKDEKEKKTPKSVIK
GGSERFEKKLTKKVTKKVKKGEKKVVKSQKVVTKTVKKSEKKVVKKKRVV
EKTVKKTEKKFVKKTNTMTNKVTIAPKTTVY*
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mRNA from alignment at tig00000027_pilon:45291..46436-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra979.t1 ID=Ggra979.t1|Name=Ggra979.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1146bp|location=Sequence derived from alignment at tig00000027_pilon:45291..46436- (Gracilaria gracilis GNS1m male)
ATGCGTGTCGGAGTGATCGTCGTGTTGGCTTGCCTCCTTTTGGCATCTGA
TTACAAGCCAGTATCCAGTGCACCGATCCCATCATCCACGTACAGCCATG
AATACCCGACCCCAGACACCGTCAGAATGAAGAAGGAGCCAGTGGACGGA
TACAAGCGCCCGCCGAAGGACGGCAGAGATGGCAGAGACGGCAGAGACGG
CCGGAATGGAAAACCCGGGAAGCCCGGAAAGCCTGGAAAGCCTGGAAAGC
GAGGCGGAGAGGGAGGAGATGGAGGTGACGGAGGGGCGGGCAGCGATGGT
GCCCCCGGCGGCGCCGGCGGGAGTGGCGGCGCTGGCAGCGGTACTGCACC
GGGTGGAGACGGTGGTGATGGGGGTGCAGGGGGTGCAAGCGCTCCAGGAG
GTGATGGTGGAGAAGGAGGTGACGGGTTTGTCGGTGGGGAAGGAGGCGAT
GGTGGTATGGGAGGAACTTCGTTCACTGATGATGGCGGGGACGGCGGCAA
AGGAGGGGAGGGGGGAAATGGGGTGGTTGCGGGCGAAGGAGGGGATGGTG
GGAATGGTGGACATTCTGCTGTCGCGGATGGGGGAGATGGCGGAGACGGG
GGTTCAGGAGGGGATGGGATTCTTGGGGGTGGTGGTGGGGATGGTGGAGG
TGGTGGGATTGGTCTCGGCGGTGAAGGAGGTTCTGGGGGTACTGGTGGTG
AGGGCGGTGGTGGTGCTCTGCCTGGGGATGGTGGGAACGGGGGAAATGGT
GGACCTGGGTTGATTGGAGGACCAGGTGGGGATGGTGGTGATGTGGGAGA
ACAGTTTAGTGATGAAAAAGCTATTGAAGTGGCTACCGATGCGGTTTCAA
TGAATGCGAAGGACGAGAAGGAAAAGAAGACTCCAAAGAGTGTGATTAAG
GGTGGTTCAGAGAGGTTTGAGAAAAAGTTGACGAAGAAAGTCACTAAGAA
GGTGAAGAAGGGTGAGAAGAAGGTGGTGAAATCGCAGAAGGTGGTGACTA
AGACAGTGAAGAAGTCCGAAAAGAAGGTGGTAAAGAAGAAGAGGGTGGTG
GAGAAAACGGTGAAGAAGACGGAAAAGAAATTCGTGAAGAAGACAAACAC
AATGACGAACAAGGTGACCATTGCGCCGAAGACGACCGTGTATTGA
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Coding sequence (CDS) from alignment at tig00000027_pilon:45291..46436-

>Ggra979.t1 ID=Ggra979.t1|Name=Ggra979.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1146bp|location=Sequence derived from alignment at tig00000027_pilon:45291..46436- (Gracilaria gracilis GNS1m male)
ATGCGTGTCGGAGTGATCGTCGTGTTGGCTTGCCTCCTTTTGGCATCTGA
TTACAAGCCAGTATCCAGTGCACCGATCCCATCATCCACGTACAGCCATG
AATACCCGACCCCAGACACCGTCAGAATGAAGAAGGAGCCAGTGGACGGA
TACAAGCGCCCGCCGAAGGACGGCAGAGATGGCAGAGACGGCAGAGACGG
CCGGAATGGAAAACCCGGGAAGCCCGGAAAGCCTGGAAAGCCTGGAAAGC
GAGGCGGAGAGGGAGGAGATGGAGGTGACGGAGGGGCGGGCAGCGATGGT
GCCCCCGGCGGCGCCGGCGGGAGTGGCGGCGCTGGCAGCGGTACTGCACC
GGGTGGAGACGGTGGTGATGGGGGTGCAGGGGGTGCAAGCGCTCCAGGAG
GTGATGGTGGAGAAGGAGGTGACGGGTTTGTCGGTGGGGAAGGAGGCGAT
GGTGGTATGGGAGGAACTTCGTTCACTGATGATGGCGGGGACGGCGGCAA
AGGAGGGGAGGGGGGAAATGGGGTGGTTGCGGGCGAAGGAGGGGATGGTG
GGAATGGTGGACATTCTGCTGTCGCGGATGGGGGAGATGGCGGAGACGGG
GGTTCAGGAGGGGATGGGATTCTTGGGGGTGGTGGTGGGGATGGTGGAGG
TGGTGGGATTGGTCTCGGCGGTGAAGGAGGTTCTGGGGGTACTGGTGGTG
AGGGCGGTGGTGGTGCTCTGCCTGGGGATGGTGGGAACGGGGGAAATGGT
GGACCTGGGTTGATTGGAGGACCAGGTGGGGATGGTGGTGATGTGGGAGA
ACAGTTTAGTGATGAAAAAGCTATTGAAGTGGCTACCGATGCGGTTTCAA
TGAATGCGAAGGACGAGAAGGAAAAGAAGACTCCAAAGAGTGTGATTAAG
GGTGGTTCAGAGAGGTTTGAGAAAAAGTTGACGAAGAAAGTCACTAAGAA
GGTGAAGAAGGGTGAGAAGAAGGTGGTGAAATCGCAGAAGGTGGTGACTA
AGACAGTGAAGAAGTCCGAAAAGAAGGTGGTAAAGAAGAAGAGGGTGGTG
GAGAAAACGGTGAAGAAGACGGAAAAGAAATTCGTGAAGAAGACAAACAC
AATGACGAACAAGGTGACCATTGCGCCGAAGACGACCGTGTATTGA
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