Ggra7249.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7249.t1
Unique NameGgra7249.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length679
Homology
BLAST of Ggra7249.t1 vs. uniprot
Match: R7QKF5 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 291 bits (744), Expect = 2.750e-81
Identity = 186/547 (34.00%), Postives = 277/547 (50.64%), Query Frame = 0
Query:  181 ERELDIDGINENLGKHFVEETNTVLRNVVK--NIQESPTGDRAL--------NESSLPR-------LAAFDVFLPAYILSKLSRNINRVLKARRQPQTNELEFKGVIILHVLAASYSTCVSTMTAPENSQFFYQIGITGQRYKEIWSALSCTVQRRQRVETCGFGCSNVPLRANALVTELEDELAAINRFFF------------------------------------ALGPVNNAVCSALNPVSIASHYTRAAEKSLDAWERLVRLIQGVPTAGPIRAMVDFTFAADRGYSHHEAIDFLNDRLSATILGTHKRSLDYLFVSGDGPIRKRHEGVPISEKGCRGIYCARRKPKTS---SGRPIEAVVYRESYSGRVASVYHKNEKLFKGSKFTWVPKTGYKHIEGRDELEKFHKIYHTEEQSG---GGTDGGVL---ARLKVSQINAGVKQMTLVQSQDPGWFLARAFQFTYRTTNNFIKDVAGNFKANCGALVDLVHGKYTGYGGVHFSDNSSEVAAHLELRFKAICHVLNGRLSSV---SPRNDFA 662
            E E+ +D ++  L   F+ E N++L NV++  N +ES      +        N+ S PR       L+    F+P  +L KL    NR L +R Q  T   E  G+++LHVL ASY+   S +   + S FF+ +G++  RY+++WSAL+   ++R  V+    G      R  +L+T++E E+AA+NR                                        LGPV N + SAL  V  A H+TR  EK L  WERL  L+QG  T G ++ M D  FAADRGY+  E ++F++  L A++LGTHKR + Y FV G G I +R +G+ +SEKGCR +Y A  K   S   SGR +EA +YRES SGR+A++ H N +LFK   FT VP + ++  E    L +   I+  + +     G     VL      +V Q  A +K +T  QS+DP WFL RAF+FT RT ++F+  V  +F+ +  +L   + GK    G      + S     L ++++ +C +   RL +    S R D A
Sbjct:  184 EVEVIVDEVDSVLEVRFITEANSILDNVLEEVNSRESACPHETMDSMTVSSRNDCSTPRQVKPLSRLSVLRTFIPDSLLEKLKAVANRALHSRGQKLTTVQELLGLLVLHVLCASYNEGPSVVCGAKMSDFFFHMGLSAARYRQVWSALTGCREKRTAVDYSTTGWCRTASRTTSLITDIESEVAAVNRELLYIPGATVLSLDDDHLRMASRAVSSLSFLQQHNNPKKGLGPVGNTLGSALTSVFFACHFTRRGEKLLHTWERLAPLLQGASTTGALKPMADAIFAADRGYNTKETLNFVSKTLGASLLGTHKRDMTYPFVFGSGAITRRSKGMVVSEKGCRAVYVATLKSNLSVRRSGRELEACLYRESCSGRIAAMIHNNRRLFKSRSFTIVPHSRFRGQEPLSVLAEEQVIFDADRRVSLPQGEQSAKVLNTPGSNQVDQALARIKILTFNQSEDPVWFLLRAFRFTSRTGHSFLATVTRDFENHVSSLAWALRGKQLAVGSDTLPQDHSSCEQLLRVKWECVCKLFGMRLGAEPQPSERRDLA 730          
BLAST of Ggra7249.t1 vs. uniprot
Match: R7Q9D7 (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9D7_CHOCR)

HSP 1 Score: 199 bits (507), Expect = 1.120e-50
Identity = 115/291 (39.52%), Postives = 166/291 (57.04%), Query Frame = 0
Query:  380 AAEKSLDAWERLVRLIQGVPTAGPIRAMVDFTFAADRGYSHHEAIDFLNDRLSATILGTHKRSLDYLFVSGDGPIRKRHEGVPISEKGCRGIYCARRKPKTSSGRP-----IEAVVYRESYSGRVASVYHKNEKLFKGSKFTWVPKTGYKHIEGRDELEKFHKIYHTEEQSGGGTDGG----------VLARLKVSQINAGVKQMTLVQSQDPGWFLARAFQFTYRTTNNFIKDVAGNFKANCGALVDLVHGKYTGYGGVHFSDNSSEVAAHLELRFKAICHVLNGRLSSV 655
            A EK +  WERLV+L+QGV T G +R M    FAADRGY+    I+F++D L A++LGTHKR L + FV GDGPI +RH G+ +SE+GCR +Y AR K   SS R      +EA VYRES SGR+A++ H N  LF    FT V +  Y+      +LE    +Y    ++   T             V A+ +V Q+ A V+ +T +QS+DP WFL RAF+FT RT+  F++ +A ++      L  L+ G     G    S+   EV  H+++++++I  V   RL+ +
Sbjct:  423 AGEKLIHTWERLVQLLQGVSTTGSLRPMPGAIFAADRGYNSKVTIEFISDVLGASLLGTHKRDLWFPFVFGDGPITRRHRGMVVSERGCRAVYTARLKEGPSSSRASNLRAVEACVYRESCSGRIAALVHNNGALFPSRCFTIVCRDSYRAESAVRKLEAALIVYDEPWKTAVSTQRPTRSSSHAIPRVSAKSRVQQVLAQVRCLTYLQSEDPVWFLLRAFRFTSRTSFGFVQAIARDYGTRINGLAWLLQGSVLTPGTEALSEEVEEVREHIKMKWESIIAVFGLRLADL 713          
BLAST of Ggra7249.t1 vs. uniprot
Match: A0A2V3IVJ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ7_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 1.490e-41
Identity = 84/168 (50.00%), Postives = 110/168 (65.48%), Query Frame = 0
Query:  509 LFKGSKFTWVPKTGYKHIEGRDELEKFHKIYHTEEQSGGGTDGGVLARLKVSQINAGVKQMTLVQSQDPGWFLARAFQFTYRTTNNFIKDVAGNFKANCGALVDLVHGKYTGYGGVHFSDNSSEVAAHLELRFKAICHVLNGRLSSVSPRNDFAEAKSFLLSSTATVL 676
            +FK SKFT VPK G +H+    +LE+FH++Y  +E    GT G  LAR KV Q+ + V ++  +QSQDPGWFLARAFQFT +TT+NFI+  A NF+ N  AL D+V GK TGYG  HF D + E    LELR K +C VLN  LS+    N+F + K+FL+S+    L
Sbjct:    1 MFKSSKFTLVPKAGCQHLISNADLEQFHRVYERQE----GTYGLYLARYKVGQVVSEVFEVIALQSQDPGWFLARAFQFTSQTTSNFIRARAHNFEINVRALADIVKGKSTGYGNSHFPDTTIESLTRLELRLKNVCEVLNVSLSTAPSENEFDQMKTFLVSAETNAL 164          
BLAST of Ggra7249.t1 vs. uniprot
Match: R7QLD7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLD7_CHOCR)

HSP 1 Score: 133 bits (335), Expect = 2.540e-32
Identity = 77/176 (43.75%), Postives = 94/176 (53.41%), Query Frame = 0
Query:  290 ENSQFFYQIGITGQRYKEIWSALSCTVQRRQRVETCGFGCSNVPLRANALVTELEDELAAINRFFF------------------------------------ALGPVNNAVCSALNPVSIASHYTRAAEKSLDAWERLVRLIQGVPTAGPIRAMVDFTFAADRGYSHHEAIDFLND 429
            +   F ++  I+G RYKE+WSALS T ++R+  E    G  N P+  NAL+T +E ELAAINR                                       ALGPVNNA CSAL    IASHY+R  EK    W RLV+LIQGVPT G +R MVD  FA+DRGY+  E I FLN+
Sbjct:   12 KTKHFSFRCKISGSRYKEVWSALSGTKRKREGFEQSECGWLNKPVAGNALITYMEGELAAINRRLVHVEGVTIYSVDDDHNRLSSRAVLHLTNLSQVTNPKKALGPVNNAACSALTHAFIASHYSRPHEKITHVWHRLVQLIQGVPTVGALRPMVDSIFASDRGYNEVETISFLNE 187          
BLAST of Ggra7249.t1 vs. uniprot
Match: A0A2V3IWD9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWD9_9FLOR)

HSP 1 Score: 126 bits (316), Expect = 1.670e-30
Identity = 64/131 (48.85%), Postives = 86/131 (65.65%), Query Frame = 0
Query:  509 LFKGSKFTWVPKTGYKHIEGRDELEKFHKIYHTEEQSGGGTDGGVLARLKVSQINAGVKQMTLVQSQDPGWFLARAFQFTYRTTNNFIKDVAGNFKANCGALVDLVHGKYTGYGGVHFSDNSSEVAAHLEL 639
            + K SKFT VPK G +H++   +LE+FH++Y  +E    GT G  L R KV Q+ +GV  +  +QS DPGWFL RA+QFT +TT+NFI+ +A N + N  AL D+V GK TGYG +HF D + E    LEL
Sbjct:    1 MSKSSKFTLVPKAGCQHLKSSADLEQFHRVYERQE----GTYGLYLDRYKVGQVVSGVIGVAALQSHDPGWFLVRAYQFTSQTTSNFIRALAHNSEINVRALADIVKGKSTGYGNLHFPDTTIESLTRLEL 127          
BLAST of Ggra7249.t1 vs. uniprot
Match: R7QIE1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIE1_CHOCR)

HSP 1 Score: 127 bits (320), Expect = 1.420e-29
Identity = 71/169 (42.01%), Postives = 96/169 (56.80%), Query Frame = 0
Query:  463 ISEKGCRGIYCARRKPKTSSGRPIEAVVYRESYSGRVASVYHKNEKLFKGSKFTWVPKTGYKHIEGRDELEKFHKIYHT-------EEQSGGGTDGGVLAR-------LKVSQINAGVKQMTLVQSQDPGWFLARAFQFTYRTTNNFIKDVAGNFKANCGALVDLVHGK 617
            +SEKGCR +Y A +  + S GRPIEA VYRESYSGR+A+VY  +   F    +  +PK G++H    D  E+   I+         EE+     +  V  R       LKV Q+   + Q T++QS+DPGWFL RAF+FT RT+NNFI  +A N+  N   L  L+ GK
Sbjct:    3 VSEKGCRAVYSATKVSRGSKGRPIEASVYRESYSGRIAAVYSNDSTRFGAHHYCLIPKDGFRHKFDCDAEERLQLIFDNRRASAECEEEGYNLPNASVTQRALSNSAVLKVLQLLGHLLQFTILQSEDPGWFLGRAFKFTSRTSNNFIGAIARNYICNIAGLSFLLRGK 171          
BLAST of Ggra7249.t1 vs. uniprot
Match: A0A2V3IV24 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV24_9FLOR)

HSP 1 Score: 107 bits (268), Expect = 3.470e-24
Identity = 52/94 (55.32%), Postives = 65/94 (69.15%), Query Frame = 0
Query:  233 FDVFLPAYILSKLSRNINRVLKARRQPQTNELEFKGVIILHVLAASYSTCVSTMTAPENSQFFYQIGITGQRYKEIWSALSCTVQRRQRVETCG 326
            FDVF P  +L KL   +NRVL AR++  T  +EFKG+I+ HVLAASY T VS MT  E+ +F+YQ GI G+RY EIW+AL  T +R QR E  G
Sbjct:    4 FDVFFPTSLLGKLRSYVNRVLSARKEKPTTVMEFKGIIVNHVLAASYGTTVSVMTYTESEEFYYQTGILGKRYAEIWAALRGTKKRPQRAEVYG 97          
The following BLAST results are available for this feature:
BLAST of Ggra7249.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
R7QKF52.750e-8134.00Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7Q9D71.120e-5039.52EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
A0A2V3IVJ71.490e-4150.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLD72.540e-3243.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IWD91.670e-3048.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIE11.420e-2942.01Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IV243.470e-2455.32Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000871_piloncontigtig00000871_pilon:446661..448938 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7249.t1Ggra7249.t1Gracilaria gracilis GNS1m malemRNAtig00000871_pilon 446661..448938 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7249.t1 ID=Ggra7249.t1|Name=Ggra7249.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=679bp
MPSPRSSQSRVRQVEAFIPSPEKPTDQEAIGIVNKNPTSAVDLDTDTQFE
DNDSQSLLPTNLNQYLQRSHDHSIDNSDDDPTYLYSLSQTTATTSTLSAD
AQQEEAVSDCEVRELHREKNKCAAKHSLDTVTSNRIESQTMAVEDVWSSL
FSNEMDCTLEDSLDSSGATMSIGSDIDADNERELDIDGINENLGKHFVEE
TNTVLRNVVKNIQESPTGDRALNESSLPRLAAFDVFLPAYILSKLSRNIN
RVLKARRQPQTNELEFKGVIILHVLAASYSTCVSTMTAPENSQFFYQIGI
TGQRYKEIWSALSCTVQRRQRVETCGFGCSNVPLRANALVTELEDELAAI
NRFFFALGPVNNAVCSALNPVSIASHYTRAAEKSLDAWERLVRLIQGVPT
AGPIRAMVDFTFAADRGYSHHEAIDFLNDRLSATILGTHKRSLDYLFVSG
DGPIRKRHEGVPISEKGCRGIYCARRKPKTSSGRPIEAVVYRESYSGRVA
SVYHKNEKLFKGSKFTWVPKTGYKHIEGRDELEKFHKIYHTEEQSGGGTD
GGVLARLKVSQINAGVKQMTLVQSQDPGWFLARAFQFTYRTTNNFIKDVA
GNFKANCGALVDLVHGKYTGYGGVHFSDNSSEVAAHLELRFKAICHVLNG
RLSSVSPRNDFAEAKSFLLSSTATVLES*
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