Ggra1012.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra1012.t1
Unique NameGgra1012.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length528
Homology
The following BLAST results are available for this feature:
BLAST of Ggra1012.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 492..513
e-value: 60.0
score: 6.4
coord: 463..487
e-value: 0.012
score: 24.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..273
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..527
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000027_piloncontigtig00000027_pilon:456027..461400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra1012.t1Ggra1012.t1Gracilaria gracilis GNS1m malemRNAtig00000027_pilon 456027..461400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra1012.t1 ID=Ggra1012.t1|Name=Ggra1012.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=528bp
MTTPCIQRPFLHSACFLLVCACAVHASNGASPPKLLHDRRTTPSIAARAS
HPNVLRRSSDASAPLRSAASHQAPPPPRELAHGARSALNSALPRLSRQGG
SQGGRSLLDGDSCDTDEDCRGPRRCLDASSGVDNLAKSCASPSASCFCVN
HRICVSAADCDDGELCVLDVGYPTCVSRRVVDRLQLTPVPPPDADAPPPR
FGFTGELCSSDDACRGSRKCRPLKQPLADKLSCGPKFMSCTCVGDKFTQC
ENPIDEDDDKESEQQQEASDNECPDGELCQTVGGNAVCYTAKVSSKAVTE
AMKKDPPVASVFAENGGEEDTVCIAMHSLRHLKEHQLLFSQPKVARVLEP
NGKRDTSHLNCTDTEERPSKRRRTHEALTHDDIVPTTPLSFELPTFWFLD
YAQSPPLTAAPEEVAQIMNEALEAADAEGKKAVHWFHKLQCPTCDQKITK
KFMERHRTVCGFYKCDQPDCNFTSFKRNRFREHKRKHEKAGIPCRFCDAT
FKRCHDRNRHEKHRCKSNPSGSDRKQT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type