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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra1012.t1.start1 | Ggra1012.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000027_pilon 456027..456029 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra1012.t1.intron1 | Ggra1012.t1.intron1 | Gracilaria gracilis GNS1m male | intron | tig00000027_pilon 457070..460859 + |
The following stop_codon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
Ggra1012.t1.stop1 | Ggra1012.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000027_pilon 461398..461400 + |
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra1012.t1 ID=Ggra1012.t1|Name=Ggra1012.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=528bp MTTPCIQRPFLHSACFLLVCACAVHASNGASPPKLLHDRRTTPSIAARAS HPNVLRRSSDASAPLRSAASHQAPPPPRELAHGARSALNSALPRLSRQGG SQGGRSLLDGDSCDTDEDCRGPRRCLDASSGVDNLAKSCASPSASCFCVN HRICVSAADCDDGELCVLDVGYPTCVSRRVVDRLQLTPVPPPDADAPPPR FGFTGELCSSDDACRGSRKCRPLKQPLADKLSCGPKFMSCTCVGDKFTQC ENPIDEDDDKESEQQQEASDNECPDGELCQTVGGNAVCYTAKVSSKAVTE AMKKDPPVASVFAENGGEEDTVCIAMHSLRHLKEHQLLFSQPKVARVLEP NGKRDTSHLNCTDTEERPSKRRRTHEALTHDDIVPTTPLSFELPTFWFLD YAQSPPLTAAPEEVAQIMNEALEAADAEGKKAVHWFHKLQCPTCDQKITK KFMERHRTVCGFYKCDQPDCNFTSFKRNRFREHKRKHEKAGIPCRFCDAT FKRCHDRNRHEKHRCKSNPSGSDRKQT* back to topspliced messenger RNA >Ggra1012.t1 ID=Ggra1012.t1|Name=Ggra1012.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1584bp|location=Sequence derived from alignment at tig00000027_pilon:456027..461400+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGACCACTCCGTGCATTCAACGCCCCTTCCTTCACTCGGCGTGCTTCTT GCTCGTTTGCGCATGTGCCGTCCATGCGAGCAACGGCGCGTCGCCACCGA AACTGCTCCATGATCGCCGCACCACGCCGTCCATCGCAGCCCGTGCTTCC CACCCAAACGTGCTCCGCCGCAGCTCCGACGCTTCCGCGCCGTTGCGAAG CGCTGCGAGCCACCAAGCGCCGCCTCCCCCGCGCGAGCTGGCGCACGGCG CACGTTCCGCGCTCAACTCCGCGCTTCCGCGCCTGTCGCGGCAGGGAGGC AGCCAAGGCGGCCGGTCGCTGCTCGACGGCGACTCGTGCGACACGGACGA AGACTGTCGGGGCCCCCGCCGCTGTCTGGACGCTTCGTCGGGCGTGGACA ACCTCGCCAAGTCGTGCGCCTCTCCGTCCGCCTCGTGCTTCTGCGTCAAC CACCGCATCTGCGTGTCCGCCGCCGACTGCGACGACGGCGAGCTGTGCGT GCTGGACGTCGGCTACCCTACGTGCGTGTCGCGGCGCGTCGTGGATCGGC TGCAGTTGACGCCCGTgccgccgccggacgccgacgcgccgccgccgcGC TTTGGATTCACCGGCGAGCTGTGCTCCTCGGATGACGCCTGCAGGGGGAG TCGCAAGTGTAGGCCGCTGAAGCAGCCGTTGGCCGATAAGTTGAGCTGCG GACCAAAGTTTATGAGCTGCACGTGCGTCGGCGACAAGTTCACGCAATGT GAGAATCCGATCGATGAAGATGACGACAAAGAGTCAGAGCAGCAGCAAGA GGCGTCAGATAACGAATGCCCGGACGGCGAACTCTGTCAGACGGTTGGAG GGAATGCTGTATGCTACACTGCCAAGGTTAGTTCGAAGGCCGTTACAGAA GCCATGAAGAAGGACCCGCCAGTAGCGTCGGTGTTTGCGGAGAACGGAGG GGAGGAAGACACAGTTTGCATTGCAATGCACTCGCTTCGCCATCTCAAGG AGCACCAACTGCTGTTCTCGCAACCGAAGGTAGCGCGAgttctGGAGCCA AATGGAAAGCGCGATACGAGTCATCTGAACTGTACGGACACTGAAGAACG ACCATCCAAGCGGAGAAGAACTCACGAAGCACTTACCCATGACGACATTG TACCAACAACTCCGCTGTCCTTTGAGTTACCAACGTTCTGGTTCTTGGAT TATGCTCAGTCTCCGCCTCTCACAGCAGCACCGGAAGAAGTTGCACAGAT TATGAACGAAGCTCTGGAAGCCGCTGATGCCGAGGGAAAAAAGGCGGTGC ACTGGTTCCACAAGCTCCAGTGCCCAACCTGTGACCAAAAGATCACGAAG AAGTTCATGGAACGTCACAGAACAGTGTGTGGGTTCTACAAATGTGATCA GCCCGATTGTAATTTCACCTCTTTCAAGAGGAATCGCTTCCGTGAGCATA AAAGGAAGCACGAGAAGGCGGGTATCCCATGCAGGTTCTGCGACGCGACG TTTAAAAGATGCCACGACCGGAACCGACACGAAAAGCATCGCTGCAAATC GAATCCTTCTGGTTCCGATAGAAAGCAAACTTGA back to topprotein sequence of Ggra1012.t1 >Ggra1012.t1 ID=Ggra1012.t1|Name=Ggra1012.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=528bp
MTTPCIQRPFLHSACFLLVCACAVHASNGASPPKLLHDRRTTPSIAARAS HPNVLRRSSDASAPLRSAASHQAPPPPRELAHGARSALNSALPRLSRQGG SQGGRSLLDGDSCDTDEDCRGPRRCLDASSGVDNLAKSCASPSASCFCVN HRICVSAADCDDGELCVLDVGYPTCVSRRVVDRLQLTPVPPPDADAPPPR FGFTGELCSSDDACRGSRKCRPLKQPLADKLSCGPKFMSCTCVGDKFTQC ENPIDEDDDKESEQQQEASDNECPDGELCQTVGGNAVCYTAKVSSKAVTE AMKKDPPVASVFAENGGEEDTVCIAMHSLRHLKEHQLLFSQPKVARVLEP NGKRDTSHLNCTDTEERPSKRRRTHEALTHDDIVPTTPLSFELPTFWFLD YAQSPPLTAAPEEVAQIMNEALEAADAEGKKAVHWFHKLQCPTCDQKITK KFMERHRTVCGFYKCDQPDCNFTSFKRNRFREHKRKHEKAGIPCRFCDAT FKRCHDRNRHEKHRCKSNPSGSDRKQT* back to topmRNA from alignment at tig00000027_pilon:456027..461400+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra1012.t1 ID=Ggra1012.t1|Name=Ggra1012.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=5374bp|location=Sequence derived from alignment at tig00000027_pilon:456027..461400+ (Gracilaria gracilis GNS1m male) ATGACCACTCCGTGCATTCAACGCCCCTTCCTTCACTCGGCGTGCTTCTT
GCTCGTTTGCGCATGTGCCGTCCATGCGAGCAACGGCGCGTCGCCACCGA
AACTGCTCCATGATCGCCGCACCACGCCGTCCATCGCAGCCCGTGCTTCC
CACCCAAACGTGCTCCGCCGCAGCTCCGACGCTTCCGCGCCGTTGCGAAG
CGCTGCGAGCCACCAAGCGCCGCCTCCCCCGCGCGAGCTGGCGCACGGCG
CACGTTCCGCGCTCAACTCCGCGCTTCCGCGCCTGTCGCGGCAGGGAGGC
AGCCAAGGCGGCCGGTCGCTGCTCGACGGCGACTCGTGCGACACGGACGA
AGACTGTCGGGGCCCCCGCCGCTGTCTGGACGCTTCGTCGGGCGTGGACA
ACCTCGCCAAGTCGTGCGCCTCTCCGTCCGCCTCGTGCTTCTGCGTCAAC
CACCGCATCTGCGTGTCCGCCGCCGACTGCGACGACGGCGAGCTGTGCGT
GCTGGACGTCGGCTACCCTACGTGCGTGTCGCGGCGCGTCGTGGATCGGC
TGCAGTTGACGCCCGTgccgccgccggacgccgacgcgccgccgccgcGC
TTTGGATTCACCGGCGAGCTGTGCTCCTCGGATGACGCCTGCAGGGGGAG
TCGCAAGTGTAGGCCGCTGAAGCAGCCGTTGGCCGATAAGTTGAGCTGCG
GACCAAAGTTTATGAGCTGCACGTGCGTCGGCGACAAGTTCACGCAATGT
GAGAATCCGATCGATGAAGATGACGACAAAGAGTCAGAGCAGCAGCAAGA
GGCGTCAGATAACGAATGCCCGGACGGCGAACTCTGTCAGACGGTTGGAG
GGAATGCTGTATGCTACACTGCCAAGGTTAGTTCGAAGGCCGTTACAGAA
GCCATGAAGAAGGACCCGCCAGTAGCGTCGGTGTTTGCGGAGAACGGAGG
GGAGGAAGACACAGTTTGCATTGCAATGCACTCGCTTCGCCATCTCAAGG
AGCACCAACTGCTGTTCTCGCAACCGAAGGTAGCGCGAgttctgtgcgac
tccaacgaaagctgcgccactccggggcacatggtgtcgtataacggcaa
gctcatgatgatgaagacgtactgtcaaatgagtggctgcacttccaggg
tgacgtacgtgaacagccctcgttttcggcgcgcgatgaggattgagtcc
aacacgcagtcgctttcgttcactgcgttggctgcccgatacgaaacaga
ctctgaagaaaggcttctttcgctggccgttcgtgtcggattgctttgaa
ggctggaggcacgcatgcagaGGTCGGTAGCAGTTGGAGGAGCCCGAACT
GCACTTGAAGAAAACAAGTGACAGTACGACAGTCTCGCCCGACAACTTCC
GGGTCGCAGAGGTTCGAGTGTCCCAGCGGCAATCCCATGCTTGAAGGTTG
TGCGTATAGGGAAGGGAGAGGATGAGGTTTGCTGCGGCGAACTGCGAACG
TTATGCTCACGCACTTCCTGCCTGCTTGGGATCCTCGCTGCGGGAGGCGT
AACTCATACAAGTGCACTGACCAATAAAAAAACCGCCAGCAGATTCATGC
TTTAAAAACTGAGTTGGGCTATATTTGCATATCTCTGTCACGTAGAGCTA
CACCTGCCTATGTTTCCCAAGCCATACAGTATTTAAGTCTCGCCGTCCCG
TCATTCCGAAGATCAAGAGTTGTTCTGGTGGTACAATGTCATCATGGGCA
AGAGTCTCATGAATTTTTCTTCGTTTGGCTGGTTGTTCTCCTGCTTCCAC
CCTGCTCGGTCGGCGAGCATCGCGCTTTCTATTCTGTTCCTTGGGACCCT
TCGAAGAAGGAGCACTCGATTTCATATGGGTTTCATCAGGCCCCTGGGTT
TTATGGTACACCTGAACACCCGAAGAGGTTGTCCAGATTATGGACGAATC
TCTGGAAGACGCCGATGTCGAGGGAAAAAGGGCGGTGCACTGGTTCCACA
AGCTCCAGTGCCCAACCTGTGATCAAAAGATAACGAAGAAGTTTATGGAA
CGTCACAGAACAGTGTGTGGGTTGTACAAATGTGATCAGCCCGACTGTAA
TTTCACCTCTTTCAAGAGGTATCGCTTCCGTGAGCATAAAAGGAAGCACG
AAAAGGCGGATATCCCATGCAGGTTCTGCGACGCGATGTTCAAACGAAAC
CACGACCGGAACAGACACGAAAAGCATCGCTGCAAATCGAATCCCGCTGG
TTCCGGAAGCAGACAATCTTCTCAATCTTGACAAAAGGTCAGCCTTTTTG
GCCGTGGAAGGCTGGGTTTGCTGTTAATCCAACGGAATGGATAACAGACT
GCCATGCTTTGTTTTGATAGAGAGTCATGTATCTTGAGGCGAACAGTGCT
GTGCTTGAGATAAAGTTTGAGAGCGTTGGTTTTCCAGTAAGCCAAGTGAA
CCACATTTGTTTCTAGCATCTTCTTGATCTTTCTCTCTCAGACGTCTTGG
ATtctgtggatagataaggaaatagtaaaagtcatagaagcaggttggcg
tccttttaggtttttaataattgtgtattgaagtgcaccgcaactgttgt
tggtgggcggagttccagaaggtcaaagatcgtcgtcatgccccaattct
gtggtgaacactttccgtgaggccgttctgggcctctgcgcccctttaac
ggccccactcacaacatgaatgttttttatacgacactgacaaccggtca
aggactgtcattgccacctactgcgggcgttgagtcatcatTGTAGTGAA
AGAACGCCTTTTTCCCGTGTTTCAATTGGTTCTTAGATGTTGTTCATTAG
AGCGAATGTATGTTGAGGTTTGGGATGTGTTACAGTGATACTCAAagaaa
aaggagtttcagacactactaaaggactgtggacgcgtactgtatatgtg
tacatgtgcatctgtatgctacaaacatccccattgggtggtgacggtag
tgtaacgctttgaacgaattgtgatctacgaatttgcgtgtagtatactg
cagatattctacttggtagttgtttagagagcacatgaactctgcagaac
cacaacaacaaaaatgaaccagtcaacctttttgcaacctttactttcta
tacgctgccctactggcgcctgctgtattaccccgcgtctgcctgtccgc
tgggacctgaggaacgcaattgggattaccacgtacgtgcagctgtggtt
cgaacccggccgattgataatGTGCGCGCTGCGGTTTCAGTGAGCCGGGG
AGCTGTCGGACGAATTCTTAAGAAGATGCATATCAGTTCCTTTTCTGTAG
TTTAGTGTCTTTAGCTACACAGCCACTCTATTGTATAGCTTTCTACTACC
TTGCGCCTCGAGGAAAGACTTTTAGCACTCTCTACGGAGATGACCTTGTG
TAAGAATCTCTGACAATGTCACGCAGAAGAGTGCGGACATGAAGCTTCGC
CAATTGTTCCCCACCATCCCCGCCTTTCCTCGTGCTCTTGGCGCTCTTCG
CCTGCATTACGATCAAACTGTGATGTGAGACATTGCGCTGTTTTGAACTG
AAGCCCGTGCCGTCGCCGGACTCCGATGCCCAGCCGCCAGCGTTTGGCTT
CACTGGCGAGCTGTAATCCTCGGATGAGCGTTGCTGCTGCAATTGCAAGT
GCAGGCCGCAGCAGCAGGCGCTCGCCGAAGTTTCGAGCTGCGGACAACAG
TCTAAGAGCTGCTCGTGCGTTGACTATAAGTTCACGCCGTGTGAAAATCC
GATCGATGAAGATGACGACAACGATGCTGAACGTTAGTTCGAAGGCCGTT
ACAGAAGCAATGGAGAAGGATCCGCCAGTAGCGTCGATGTTTGCGGAGAA
CTAAGCGGAGGAAGACATTGTTTGCATTGCGACGCGCTCGCTTAACCGTC
TCAAGGAGCACCGACTTATGTTTCCGGAACCGAAGGTAGCGCAAGTTCTG
TGCGACTCAAACAAAAGCTGCACCACTCCAGGGCACATGGTGTCGTACAA
CGACAACTGATGATGACGAAGACGTAATATCAAATACGTGGCTGCACTTC
AATGGTGACGTACGCGAAAAGCCCTTTTTTCTCGGCGCGCGATGAGAATC
GAGTCCAACACGCAGTCTCTTTCGTTCGCTGCGCTGGCTGCCCGATACGA
TACAGAAACTGAAGAAAGGCTTCTTTCGCTGGCCGTTTATGTCGGATTGC
TTTGAAAACTGGATGCAAAGGTGGGTAGCAAGCAAAGTAAACAAGTGACA
GTTTTGCAGTCTCGGCCGACAACGTTTTCCGAGTCGCAGAGGTTTGAGTG
TCCCAGCTGCAGCTCCACGCCCGAAGTTTGCATGGATAGGGAAGGGAGAG
GAGGCGGTTTGCTGTAGCGAAGGTATGTCAAGCACTGCGCGGCGTTTAGA
TCGCTGCCGCGGGAGGCGGAACGCATGAGTGCACTGACCAATAAAGAACC
GCCAACAAATCAATGCTCCAGAAACTGATGAGTTCGGCTATTTGCCGATC
TCTGTCACGTACACGTTCACACGTTTTCCCAAATCATATTTGCGTTTCAC
GCTCGTGCCAGATCAAATATGACCCGACTCAAGGATGCGTCTTTCCCCAT
TCCCGTACTTTCCGAACTCAACCGCTTCCCTCGGAAACCTGCCTTCTTAC
TAACAGCAAAACTTCGAGTAACTACCTATCACGATAACATTCACACTTGT
TGATTGCTCATGGCCTGCTACGAAACCCAGCAGACCGACGAAACCCTTGT
GAACCCGAGCGCTCCTTCATGTGAGAGTCCTAGGGAGCCAAATGGAAAGC
GCGATACGAGTCATCTGAACTGTACGGACACTGAAGAACGACCATCCAAG
CGGAGAAGAACTCACGAAGCACTTACCCATGACGACATTGTACCAACAAC
TCCGCTGTCCTTTGAGTTACCAACGTTCTGGTTCTTGGATTATGCTCAGT
CTCCGCCTCTCACAGCAGCACCGGAAGAAGTTGCACAGATTATGAACGAA
GCTCTGGAAGCCGCTGATGCCGAGGGAAAAAAGGCGGTGCACTGGTTCCA
CAAGCTCCAGTGCCCAACCTGTGACCAAAAGATCACGAAGAAGTTCATGG
AACGTCACAGAACAGTGTGTGGGTTCTACAAATGTGATCAGCCCGATTGT
AATTTCACCTCTTTCAAGAGGAATCGCTTCCGTGAGCATAAAAGGAAGCA
CGAGAAGGCGGGTATCCCATGCAGGTTCTGCGACGCGACGTTTAAAAGAT
GCCACGACCGGAACCGACACGAAAAGCATCGCTGCAAATCGAATCCTTCT
GGTTCCGATAGAAAGCAAACTTGA back to topCoding sequence (CDS) from alignment at tig00000027_pilon:456027..461400+ >Ggra1012.t1 ID=Ggra1012.t1|Name=Ggra1012.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1584bp|location=Sequence derived from alignment at tig00000027_pilon:456027..461400+ (Gracilaria gracilis GNS1m male) ATGACCACTCCGTGCATTCAACGCCCCTTCCTTCACTCGGCGTGCTTCTT GCTCGTTTGCGCATGTGCCGTCCATGCGAGCAACGGCGCGTCGCCACCGA AACTGCTCCATGATCGCCGCACCACGCCGTCCATCGCAGCCCGTGCTTCC CACCCAAACGTGCTCCGCCGCAGCTCCGACGCTTCCGCGCCGTTGCGAAG CGCTGCGAGCCACCAAGCGCCGCCTCCCCCGCGCGAGCTGGCGCACGGCG CACGTTCCGCGCTCAACTCCGCGCTTCCGCGCCTGTCGCGGCAGGGAGGC AGCCAAGGCGGCCGGTCGCTGCTCGACGGCGACTCGTGCGACACGGACGA AGACTGTCGGGGCCCCCGCCGCTGTCTGGACGCTTCGTCGGGCGTGGACA ACCTCGCCAAGTCGTGCGCCTCTCCGTCCGCCTCGTGCTTCTGCGTCAAC CACCGCATCTGCGTGTCCGCCGCCGACTGCGACGACGGCGAGCTGTGCGT GCTGGACGTCGGCTACCCTACGTGCGTGTCGCGGCGCGTCGTGGATCGGC TGCAGTTGACGCCCGTgccgccgccggacgccgacgcgccgccgccgcGC TTTGGATTCACCGGCGAGCTGTGCTCCTCGGATGACGCCTGCAGGGGGAG TCGCAAGTGTAGGCCGCTGAAGCAGCCGTTGGCCGATAAGTTGAGCTGCG GACCAAAGTTTATGAGCTGCACGTGCGTCGGCGACAAGTTCACGCAATGT GAGAATCCGATCGATGAAGATGACGACAAAGAGTCAGAGCAGCAGCAAGA GGCGTCAGATAACGAATGCCCGGACGGCGAACTCTGTCAGACGGTTGGAG GGAATGCTGTATGCTACACTGCCAAGGTTAGTTCGAAGGCCGTTACAGAA GCCATGAAGAAGGACCCGCCAGTAGCGTCGGTGTTTGCGGAGAACGGAGG GGAGGAAGACACAGTTTGCATTGCAATGCACTCGCTTCGCCATCTCAAGG AGCACCAACTGCTGTTCTCGCAACCGAAGGTAGCGCGAgttctGGAGCCA AATGGAAAGCGCGATACGAGTCATCTGAACTGTACGGACACTGAAGAACG ACCATCCAAGCGGAGAAGAACTCACGAAGCACTTACCCATGACGACATTG TACCAACAACTCCGCTGTCCTTTGAGTTACCAACGTTCTGGTTCTTGGAT TATGCTCAGTCTCCGCCTCTCACAGCAGCACCGGAAGAAGTTGCACAGAT TATGAACGAAGCTCTGGAAGCCGCTGATGCCGAGGGAAAAAAGGCGGTGC ACTGGTTCCACAAGCTCCAGTGCCCAACCTGTGACCAAAAGATCACGAAG AAGTTCATGGAACGTCACAGAACAGTGTGTGGGTTCTACAAATGTGATCA GCCCGATTGTAATTTCACCTCTTTCAAGAGGAATCGCTTCCGTGAGCATA AAAGGAAGCACGAGAAGGCGGGTATCCCATGCAGGTTCTGCGACGCGACG TTTAAAAGATGCCACGACCGGAACCGACACGAAAAGCATCGCTGCAAATC GAATCCTTCTGGTTCCGATAGAAAGCAAACTTGA back to top
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