Ggra7629.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7629.t1
Unique NameGgra7629.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length391
Homology
BLAST of Ggra7629.t1 vs. uniprot
Match: A0A2V3ISI7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 211 bits (537), Expect = 2.180e-61
Identity = 134/377 (35.54%), Postives = 199/377 (52.79%), Query Frame = 0
Query:    1 MIVIPLKSQYVSLIVTFISGASELALLFAILRWNRLFQNKSLERGRKVNVHQHLNRTKLLTAFATALFLIIEIANSFYSDPTTIERSKTRPCSFLASADFGTNGFVASDDARVKVTNSEFEFHPISISCLEGNETAVRQRGGKMFETDDGLVIQCTETLYSFTRETDLNEAIPDDFVVECVPAPLRNAEEQEQEACSFAYRKGSRVAFSDFVVKSDLPILLEQPELIAVWHTDVAFDVVGKERELASRAAFHTSRGEGDDIDLRRKIFSRDGESMCEFVREIDATVLNVTFMGALASLWVLCLLVFLISLLFQSRLTYDMSDPLDWATKTVIDRDLMGVENPEASSVDVNGRLFVVLSNSTETPDQWLDPSRLLRRR 377
            M++IPLKSQY SLI T +SG +ELALL A+L +N+  + ++LE G +VNV  H  RT+ LT  AT  F+ +E++NSF+SDP       T+ C  L +          S  A V           + I+CL  N + + Q  G +  +DDG +    + L+S       NE +PD+  +EC+        + E   C+F Y  GS V F++ V+ +DL  +L+    + VW T V ++  G EREL  R+         D   LRR++F+   E+ C F     AT +   F+ A+A  W L L  FL SL  + R+ YDMSDPLDWA +TV D D   ++NP  ++   NG  FV+++ S+   ++  +   L RRR
Sbjct:    1 MVLIPLKSQYTSLIATILSGLAELALLSAVLGYNKYLECRALENGGRVNVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDALPIRRGMLDISLRAAV-----------VGINCLGTNTSLLWQLAGNI--SDDGEIKCGDDFLFSADIHHSPNEPVPDEHTMECIL-------DGELNLCAFLYSNGSEVTFTEIVLDTDLSFVLDNNYALRVWKTTVYYNTTGMERELLRRSITLARDLVTDQFVLRREVFAGAEETECNFDVFSPATTIKEGFLYAIAVAWTLSLAAFLGSLAIRGRVFYDMSDPLDWARQTVRDEDSSDIDNPVVTTRYENGTRFVLVTRSSAPSEEESNVGTLFRRR 357          
BLAST of Ggra7629.t1 vs. uniprot
Match: A0A2V3J5C2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 205 bits (522), Expect = 4.650e-59
Identity = 133/401 (33.17%), Postives = 200/401 (49.88%), Query Frame = 0
Query:    1 MIVIPLKSQYVSLIVTFISGASELALLFAILRWNRLFQNKSLERGRKVNVHQHLNRTKLLTAFATALFLIIEIANSFYSDPTTIERSKTRPCSFLASADFGTNGFVASDDARVKVTNSEFEFHPISISCLEGNETAVRQRGGKMFE---------TDDGLVIQCT--ETLYSFTRETDLNEAIPDDFVVECVPAPLRNAEEQEQEACSFAYRKGSRVAFSDFVVKSDLPILLEQPELIAVWHTDVAFDVVGKERELASRAAFHTSRGEGDDIDLRRKIFSRDGESMCEFVREIDATVLNVTFMGALASLWVLCLLVFLISLLFQSRLTYDMSDPLDWATKTVIDRDLMGVENPEASSVDVNGRLFVVLSNSTETPDQWLDPSRLLRRRHRRMERSTDEGGV 390
            M++IPLKSQY SLIVT ISG +ELALL A+L +N+  + ++L+ G KVNV  H  RTK LT  AT  F+ +E+ +SFYSDP        + C+ L +              +  + N   +   + + C+  N T   Q  G + +           D  V +C   E LY+   E   +E +PD++VV CV             +C F YR G+ V F+DFV   D+  +L +   + VW T ++++V G E   A+RA    S+G  D   LRR +F+    + C F    DAT +   F+ A+   W L +  F+ S   + R+ YDMSDPL WA KT+ D DL   +NP  ++V  NG   ++++ S+   +Q      L RR+  +     D   +
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDALT-----------VQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFECEKKEVLYTANVERAPDEPVPDEYVVGCVGT-----------SCVFVYRSGNEVTFTDFVHSEDVSRVLNESITLPVWKTTISYNVTGLESAFATRAVDLLSQGVTDGFTLRRGVFAGSAITQCNFKTFSDATRVRKGFIYAIVIAWALSISAFVGSFAIRRRIFYDMSDPLHWAQKTIRDNDLSDTDNPVVTTVYENGSRALLVTRSSAPSEQESSIGTLFRRKRTKESSERDSSDL 379          
BLAST of Ggra7629.t1 vs. uniprot
Match: A0A2V3IT05 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 142 bits (358), Expect = 7.710e-35
Identity = 118/396 (29.80%), Postives = 186/396 (46.97%), Query Frame = 0
Query:    1 MIVIPLKSQYVSLIVTFISGASELALLFAILRWNRLFQNKSLERGRKVNVHQHLNRTKLLTAFATALFLIIEIANSFYSDPTTIERSKTRPCSFLASADFGTNGFVASDDARVKVTNSEFEFHPISISCLEGNETAVRQRGGKM-FETDDGLVIQCTE-TLYSFTRETDLNEAIPD---------DFVVECV-PAPLRNAEEQEQEACSFAYRKG------SRVAFSDFVVKSDLPILLEQPELIAVWHTDVAFDVVGKERELASRAAFHTSRGEGDDIDLRRKIFSRDGESMCEFV-REIDATVLNVTFMGALASLWVLCLLVFLISLLFQSRLTYDMSDPLDWATKTV--IDRDLMGVENPEASSVDVNGRLFVVLSNSTETPDQWLDPSRLLR 375
            M+ IPLKSQ+VSLIVT ISG +EL L  A+L +N+  +  +L +GR+V+V  H  R K L   A  +F+ +E+  SF+SDP    + +T  C  +   D    GF          TN E +F  I I C+   +    QR G      +    ++C +  LY +  E DL   + +         D V+EC+ P P    +   +  C+   +        + V  S  V +S++  L+ Q  +I    T V ++  G  R  A R      +   D +++R+++F       C F  R+ D T + +  +  + + W+L  L F  +LL +  + YDMSDPL WA +T   ID  ++G  NP  +SV  +G   + +S S    D  L   R +R
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDL-REGFTGD-------TNDE-DF--ILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHALYEYPNEDDLQFTLTNVTRTGGTDTDLVLECILPTPAVGEKPPTERLCAAVRQLPPNSIGFTNVYLSAAVRESEVGPLVNQQVVIPFLETSVRYNTSGLSRNFARRLLRAYDKDVTDPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLGLVYGIVAAWILSFLTFASTLLLRRSIFYDMSDPLHWAQRTYRHIDEPIVG--NPVVTSVYEHGERLMYVSGSASNDDDLLSRMRNIR 383          
BLAST of Ggra7629.t1 vs. uniprot
Match: A0A2V3J5A0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 115 bits (289), Expect = 2.060e-25
Identity = 111/376 (29.52%), Postives = 170/376 (45.21%), Query Frame = 0
Query:    1 MIVIPLKSQYVSLIVTFISGASELALLFAILRWNRLFQNKSLERGRKVNVHQHLNRTKLLTAFATALFLIIEIANSFYSDPTTIERSKTRPCSFLA-----SADFGTNGFVASDDARVKVTNSEFEFHPISISCLEGNETAVRQR-GGKMFETDDGLVIQCTETL-YSFTRETDLNEAIPDDFVVEC---VPAPLRNAEEQE----QEACSFAYRKGSRVAFSDFVVKSDLPILLEQPELIAVWHTDVAFDVVGKER--ELASRAAFHTSRGEGDDIDLRRKIFSRDGESMCEFVREIDATVLNVTFMGALASLWVLCLLVFLISLLFQSRLTYDMSDPLDWATKTVIDRDLMGVENPEASSVDVNGRLFVVLSNS 360
            M++IPLKSQYVSLI T IS  +EL+LL A+LR N   +  +L++G  V+V +H NR   L    TA F  IE+  SFYSDP      +++PC  +      S D GT+                 E   I +SC++ NE+ +  R G    ET     ++C E+    FT E  ++  I     V      P PL    +      Q A   +    + V FSD     ++ +L      I   +T +       E   + A R          D  +LRR +F       C+F R  +AT +    + +++++WV+ L  + ++LL   R+ YD+S+P+ WA +T    D     +P  S V  NG   + +S S
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTS----------------LEEIGIVLSCVKTNESNIFLRVGNYSMETRK---VECAESATLMFTLEPHVSLPIGTAAAVSSENPFPDPLLKCADGFCVVIQTASYQSSSSDTTVWFSDVFFADEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQFQRTSEATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAKRTYRRTDEPVHGDPSVSRVLENGHHVMYVSGS 357          
BLAST of Ggra7629.t1 vs. uniprot
Match: A0A2V3J6F3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F3_9FLOR)

HSP 1 Score: 115 bits (287), Expect = 2.490e-25
Identity = 101/362 (27.90%), Postives = 163/362 (45.03%), Query Frame = 0
Query:    1 MIVIPLKSQYVSLIVTFISGASELALLFAILRWNRLFQNKSLERGRKVNVHQHLNRTKLLTAFATALFLIIEIANSFYSDPTTIERSKTRPCSFLASADFGTNGFVASDDARVKVTNSEF-EFHPISISCLEGNETAVRQRGGKMFETDDGLVIQCTETLYSFTRETDLNEAIPDDFVVECVPAPLRNAEEQEQEACSFAYRKGSRVAFSDFVVKSDLPILLEQPELIAVWHTDVAFDVVGKERELASRAAFHTSRGEGDDIDLRRKIFSRDGESMCEF-VREIDATVLNVTFMGALASLWVLCLLVFLISLLFQSRLTYDMSDPLDWATKTVIDRDLMGVENPEASSVDVNGRLFVVLSNS 360
            M++I LK+ +VS+IVT +S  +ELALL  +   N L + K L+RGR V V QHL RT+LL+      F  +E+  SFY+DP    + +   C              AS+  +    +++F     I + C   +   + Q GG  F +    V   TE +Y+     + +E I  D    CV         +E  AC F  ++G+    S      +L IL   P+ +    T++ F         A+RA     +       LRR I+S   E  C F V    AT + +  + ALA++W + L +F      +  + + + DP+ WAT++V   D    +NP  + +  + +  V +S S
Sbjct:    1 MVLIRLKAPFVSVIVTVLSTLAELALLSFLFVLNNLHECKQLQRGRSVQVRQHLRRTRLLSVVCLGAFFALEVVFSFYNDPVNNVQIEIHEC------------ITASNSVKDSGDSTQFLRASDILVECRRLDNGTITQFGGN-FSSRTQQVECSTEAMYTHPLGDETSEEIVADVPFGCVSGG------EEGAACVFVQQRGNLSLISAPFFLDELSIL---PDTLPHIITELHFTPPSNVSLFATRATNAFLQNIQGPSALRRIIYSGASEDQCAFPVVRGSATTVPLAMIVALAAVWAVALAMFASVFALRRGVFFKLDDPMHWATRSVRAADDPLGDNPVLTGLMQDDKTLVHISTS 340          
The following BLAST results are available for this feature:
BLAST of Ggra7629.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3ISI72.180e-6135.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C24.650e-5933.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT057.710e-3529.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A02.060e-2529.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6F32.490e-2527.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 289..312
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 313..390
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..58
NoneNo IPR availableTMHMMTMhelixcoord: 59..78
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 290..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:528022..529194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7629.t1Ggra7629.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 528022..529194 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7629.t1 ID=Ggra7629.t1|Name=Ggra7629.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=391bp
MIVIPLKSQYVSLIVTFISGASELALLFAILRWNRLFQNKSLERGRKVNV
HQHLNRTKLLTAFATALFLIIEIANSFYSDPTTIERSKTRPCSFLASADF
GTNGFVASDDARVKVTNSEFEFHPISISCLEGNETAVRQRGGKMFETDDG
LVIQCTETLYSFTRETDLNEAIPDDFVVECVPAPLRNAEEQEQEACSFAY
RKGSRVAFSDFVVKSDLPILLEQPELIAVWHTDVAFDVVGKERELASRAA
FHTSRGEGDDIDLRRKIFSRDGESMCEFVREIDATVLNVTFMGALASLWV
LCLLVFLISLLFQSRLTYDMSDPLDWATKTVIDRDLMGVENPEASSVDVN
GRLFVVLSNSTETPDQWLDPSRLLRRRHRRMERSTDEGGV*
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