Ggra7629.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7629.t1
Unique NameGgra7629.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length391
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:528022..529194 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7629Ggra7629Gracilaria gracilis GNS1m malegenetig00000866_pilon 528022..529194 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7629.t1.start1Ggra7629.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000866_pilon 528022..528024 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7629.t1.CDS1Ggra7629.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000866_pilon 528022..529194 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7629.t1.exon1Ggra7629.t1.exon1Gracilaria gracilis GNS1m maleexontig00000866_pilon 528022..529194 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7629.t1.stop1Ggra7629.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000866_pilon 529192..529194 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7629.t1Ggra7629.t1Gracilaria gracilis GNS1m malepolypeptidetig00000866_pilon 528022..529194 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7629.t1 ID=Ggra7629.t1|Name=Ggra7629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=391bp
MIVIPLKSQYVSLIVTFISGASELALLFAILRWNRLFQNKSLERGRKVNV
HQHLNRTKLLTAFATALFLIIEIANSFYSDPTTIERSKTRPCSFLASADF
GTNGFVASDDARVKVTNSEFEFHPISISCLEGNETAVRQRGGKMFETDDG
LVIQCTETLYSFTRETDLNEAIPDDFVVECVPAPLRNAEEQEQEACSFAY
RKGSRVAFSDFVVKSDLPILLEQPELIAVWHTDVAFDVVGKERELASRAA
FHTSRGEGDDIDLRRKIFSRDGESMCEFVREIDATVLNVTFMGALASLWV
LCLLVFLISLLFQSRLTYDMSDPLDWATKTVIDRDLMGVENPEASSVDVN
GRLFVVLSNSTETPDQWLDPSRLLRRRHRRMERSTDEGGV*
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spliced messenger RNA

>Ggra7629.t1 ID=Ggra7629.t1|Name=Ggra7629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1173bp|location=Sequence derived from alignment at tig00000866_pilon:528022..529194+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATTGTGATACCTCTCAAGTCGCAGTACGTCAGTCTCATCGTCACGTT
TATATCTGGAGCTTCTGAACTGGCTCTGCTGTTCGCCATTCTCCGCTGGA
ACCGTTTGTTTCAGAACAAAAGCCTCGAACGAGGGCGAAAAGTCAATGTA
CACCAACATCTGAATCGAACAAAATTGCTGACTGCATTCGCCACAGCACT
CTTCCTAATTATCGAAATTGCCAATTCATTCTACAGCGATCCCACCACAA
TCGAGAGATCGAAGACAAGGCCATGTAGCTTTCTAGCTTCCGCTGATTTT
GGGACGAACGGCTTCGTGGCATCGGATGATGCTCGGGTGAAAGTCACAAA
CTCAGAGTTTGAGTTTCACCCTATTTCTATTTCATGTCTGGAGGGCAACG
AAACTGCAGTTAGGCAGCGTGGTGGGAAAATGTTCGAAACGGATGACGGG
TTGGTCATCCAATGCACAGAAACGCTGTACTCGTTTACTCGCGAGACTGA
CCTGAACGAAGCGATTCCTGACGATTTCGTCGTGGAATGTGTACCGGCAC
CGCTACGAAATGCGGAGGAACAAGAACAAGAAGCGTGCTCATTTGCGTAT
CGGAAAGGCAGTCGAGTTGCCTTTTCAGATTTCGTCGTAAAAAGCGACCT
ACCGATTCTTTTGGAACAGCCGGAACTCATAGCTGTGTGGCACACAGATG
TGGCGTTTGACGTAGTCGGAAAGGAAAGAGAGTTGGCATCCAGAGCAGCA
TTTCATACGTCCAGAGGTGAGGGAGACGACATAGATCTCCGTCGCAAGAT
TTTTTCTCGAGATGGAGAAAGTATGTGCGAATTTGTGCGAGAAATAGACG
CCACCGTGTTGAATGTGACGTTCATGGGCGCGCTGGCGAGCTTATGGGTC
CTGTGTTTGCTCGTGTTCTTGATTAGTTTGCTGTTTCAGTCTCGACTGAC
GTACGACATGAGCGACCCGTTGGACTGGGCGACGAAGACGGTTATCGACA
GGGACTTAATGGGCGTGGAGAATCCAGAGGCATCGAGCGTGGACGTTAAC
GGAAGACTGTTTGTGGTCTTGAGTAATTCAACGGAGACGCCAGATCAATG
GCTGGACCCTTCACGTCTTCTCCGCAGACGACACCGTCGCATGGAGAGGA
GTACAGACGAGGGGGGAGTCTGA
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protein sequence of Ggra7629.t1

>Ggra7629.t1 ID=Ggra7629.t1|Name=Ggra7629.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=391bp
MIVIPLKSQYVSLIVTFISGASELALLFAILRWNRLFQNKSLERGRKVNV
HQHLNRTKLLTAFATALFLIIEIANSFYSDPTTIERSKTRPCSFLASADF
GTNGFVASDDARVKVTNSEFEFHPISISCLEGNETAVRQRGGKMFETDDG
LVIQCTETLYSFTRETDLNEAIPDDFVVECVPAPLRNAEEQEQEACSFAY
RKGSRVAFSDFVVKSDLPILLEQPELIAVWHTDVAFDVVGKERELASRAA
FHTSRGEGDDIDLRRKIFSRDGESMCEFVREIDATVLNVTFMGALASLWV
LCLLVFLISLLFQSRLTYDMSDPLDWATKTVIDRDLMGVENPEASSVDVN
GRLFVVLSNSTETPDQWLDPSRLLRRRHRRMERSTDEGGV*
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mRNA from alignment at tig00000866_pilon:528022..529194+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7629.t1 ID=Ggra7629.t1|Name=Ggra7629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1173bp|location=Sequence derived from alignment at tig00000866_pilon:528022..529194+ (Gracilaria gracilis GNS1m male)
ATGATTGTGATACCTCTCAAGTCGCAGTACGTCAGTCTCATCGTCACGTT
TATATCTGGAGCTTCTGAACTGGCTCTGCTGTTCGCCATTCTCCGCTGGA
ACCGTTTGTTTCAGAACAAAAGCCTCGAACGAGGGCGAAAAGTCAATGTA
CACCAACATCTGAATCGAACAAAATTGCTGACTGCATTCGCCACAGCACT
CTTCCTAATTATCGAAATTGCCAATTCATTCTACAGCGATCCCACCACAA
TCGAGAGATCGAAGACAAGGCCATGTAGCTTTCTAGCTTCCGCTGATTTT
GGGACGAACGGCTTCGTGGCATCGGATGATGCTCGGGTGAAAGTCACAAA
CTCAGAGTTTGAGTTTCACCCTATTTCTATTTCATGTCTGGAGGGCAACG
AAACTGCAGTTAGGCAGCGTGGTGGGAAAATGTTCGAAACGGATGACGGG
TTGGTCATCCAATGCACAGAAACGCTGTACTCGTTTACTCGCGAGACTGA
CCTGAACGAAGCGATTCCTGACGATTTCGTCGTGGAATGTGTACCGGCAC
CGCTACGAAATGCGGAGGAACAAGAACAAGAAGCGTGCTCATTTGCGTAT
CGGAAAGGCAGTCGAGTTGCCTTTTCAGATTTCGTCGTAAAAAGCGACCT
ACCGATTCTTTTGGAACAGCCGGAACTCATAGCTGTGTGGCACACAGATG
TGGCGTTTGACGTAGTCGGAAAGGAAAGAGAGTTGGCATCCAGAGCAGCA
TTTCATACGTCCAGAGGTGAGGGAGACGACATAGATCTCCGTCGCAAGAT
TTTTTCTCGAGATGGAGAAAGTATGTGCGAATTTGTGCGAGAAATAGACG
CCACCGTGTTGAATGTGACGTTCATGGGCGCGCTGGCGAGCTTATGGGTC
CTGTGTTTGCTCGTGTTCTTGATTAGTTTGCTGTTTCAGTCTCGACTGAC
GTACGACATGAGCGACCCGTTGGACTGGGCGACGAAGACGGTTATCGACA
GGGACTTAATGGGCGTGGAGAATCCAGAGGCATCGAGCGTGGACGTTAAC
GGAAGACTGTTTGTGGTCTTGAGTAATTCAACGGAGACGCCAGATCAATG
GCTGGACCCTTCACGTCTTCTCCGCAGACGACACCGTCGCATGGAGAGGA
GTACAGACGAGGGGGGAGTCTGA
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Coding sequence (CDS) from alignment at tig00000866_pilon:528022..529194+

>Ggra7629.t1 ID=Ggra7629.t1|Name=Ggra7629.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1173bp|location=Sequence derived from alignment at tig00000866_pilon:528022..529194+ (Gracilaria gracilis GNS1m male)
ATGATTGTGATACCTCTCAAGTCGCAGTACGTCAGTCTCATCGTCACGTT
TATATCTGGAGCTTCTGAACTGGCTCTGCTGTTCGCCATTCTCCGCTGGA
ACCGTTTGTTTCAGAACAAAAGCCTCGAACGAGGGCGAAAAGTCAATGTA
CACCAACATCTGAATCGAACAAAATTGCTGACTGCATTCGCCACAGCACT
CTTCCTAATTATCGAAATTGCCAATTCATTCTACAGCGATCCCACCACAA
TCGAGAGATCGAAGACAAGGCCATGTAGCTTTCTAGCTTCCGCTGATTTT
GGGACGAACGGCTTCGTGGCATCGGATGATGCTCGGGTGAAAGTCACAAA
CTCAGAGTTTGAGTTTCACCCTATTTCTATTTCATGTCTGGAGGGCAACG
AAACTGCAGTTAGGCAGCGTGGTGGGAAAATGTTCGAAACGGATGACGGG
TTGGTCATCCAATGCACAGAAACGCTGTACTCGTTTACTCGCGAGACTGA
CCTGAACGAAGCGATTCCTGACGATTTCGTCGTGGAATGTGTACCGGCAC
CGCTACGAAATGCGGAGGAACAAGAACAAGAAGCGTGCTCATTTGCGTAT
CGGAAAGGCAGTCGAGTTGCCTTTTCAGATTTCGTCGTAAAAAGCGACCT
ACCGATTCTTTTGGAACAGCCGGAACTCATAGCTGTGTGGCACACAGATG
TGGCGTTTGACGTAGTCGGAAAGGAAAGAGAGTTGGCATCCAGAGCAGCA
TTTCATACGTCCAGAGGTGAGGGAGACGACATAGATCTCCGTCGCAAGAT
TTTTTCTCGAGATGGAGAAAGTATGTGCGAATTTGTGCGAGAAATAGACG
CCACCGTGTTGAATGTGACGTTCATGGGCGCGCTGGCGAGCTTATGGGTC
CTGTGTTTGCTCGTGTTCTTGATTAGTTTGCTGTTTCAGTCTCGACTGAC
GTACGACATGAGCGACCCGTTGGACTGGGCGACGAAGACGGTTATCGACA
GGGACTTAATGGGCGTGGAGAATCCAGAGGCATCGAGCGTGGACGTTAAC
GGAAGACTGTTTGTGGTCTTGAGTAATTCAACGGAGACGCCAGATCAATG
GCTGGACCCTTCACGTCTTCTCCGCAGACGACACCGTCGCATGGAGAGGA
GTACAGACGAGGGGGGAGTCTGA
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