Ggra7584.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7584.t1
Unique Name	Ggra7584.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	437

Homology

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BLAST of Ggra7584.t1 vs. uniprot
Match: A0A2V3IYA0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYA0_9FLOR)

HSP 1 Score: 291 bits (744), Expect = 7.400e-92
Identity = 149/252 (59.13%), Postives = 181/252 (71.83%), Query Frame = 0

Query:   69 LATGTSFKYVGFGGGYSSQN-GVFAASTVLGSGSPVSIGTAASDDIVSGSTSVISPVEATESDELSPPIGSPEVVSNIELSSILGRGLQADVPDYREASASPGQTYT-TSDSGNRKTKSNKNVSLEKAGNAPVPKVCWTMSKRCCYEEVQKGYECKDFYAYKYARCHPVIAYERICGEIKERPANHPRPKGRVKYEETVLKNYDARYGPHVAGYPADGESEYYKTDTIPAKPHGVSGTPFPTPQSYQSGSGG 318
            LA   SF  +G G G  S   GVF  S VLG+G+  ++GT  S   VSG+TSVISP   T ++      GSP  + N++LSS+L R ++A VPDYR+  AS G T T +S+   RK K  K  S  +      PK+CWT+SK CCYEEVQKGYECKD+YAYKYARCHPVI ++ +CG+IKE PA HPRPKGRVKYEE+VLKNYDA YGPHVAGYP DGESEYY+TDTIP+KPHGV+   +P PQ+Y+SGSGG
Sbjct:   20 LARAVSFSSIGLGAGAGSPKFGVFGLSGVLGNGNIAAVGTGGSGGGVSGATSVISPAGKTSNEGDVVAAGSPGAIPNMDLSSLLARPVEA-VPDYRDTGASRGYTSTESSERKKRKVKVKKKTSSWQTEGRHAPKMCWTVSKHCCYEEVQKGYECKDYYAYKYARCHPVIEFDEVCGDIKETPAEHPRPKGRVKYEESVLKNYDANYGPHVAGYPKDGESEYYRTDTIPSKPHGVTENAYPAPQAYESGSGG 270

[Close]

BLAST of Ggra7584.t1 vs. uniprot
Match: A0A2V3IL68 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL68_9FLOR)

HSP 1 Score: 118 bits (295), Expect = 2.470e-27
Identity = 58/125 (46.40%), Postives = 79/125 (63.20%), Query Frame = 0

Query:  202 VCWTMSKRCCYEEVQKGYECKDFYAYKYARCHPVIAYERICGEIKERPANHPRPKGRVKYEETVLKNYDARYGPHVAGYPADGESEYYKTDTIPAKPHGVSGTP-FPTPQSYQSGSGGVANNGYE 325
            +CW  +K+CCY E   GYECKD+YA+KYARC+    Y R C +  E      +PK RV+  +    +YD  YGPHV GYP D ESE+Y ++ +P KP+GV G P +P P+ Y++     AN+GYE
Sbjct:   91 MCWMETKKCCYIEKADGYECKDYYAHKYARCYAKFKYVRRCDKA-ESHGKPEKPKPRVEKSKCQKVHYDQNYGPHVEGYPTDAESEWYDSEELPKKPYGVKGEPQYPAPR-YEA-EPVYANSGYE 212

The following BLAST results are available for this feature:

BLAST of Ggra7584.t1 vs. uniprot

BLAST of Ggra7584.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IYA0	7.400e-92	59.13	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IL68	2.470e-27	46.40	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..436
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..191
None	No IPR available	TMHMM	TMhelix		coord: 53..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000866_pilon	contig	tig00000866_pilon:121889..123199 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7584.t1	Ggra7584.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000866_pilon 121889..123199 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7584.t1 ID=Ggra7584.t1|Name=Ggra7584.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=437bp
MNRNENRGKQFCVVDQFLFTMIPAGSPFKETTALVREIIRSPIPDNIVNL
KMISCNSFTLAFCFALLPLATGTSFKYVGFGGGYSSQNGVFAASTVLGSG
SPVSIGTAASDDIVSGSTSVISPVEATESDELSPPIGSPEVVSNIELSSI
LGRGLQADVPDYREASASPGQTYTTSDSGNRKTKSNKNVSLEKAGNAPVP
KVCWTMSKRCCYEEVQKGYECKDFYAYKYARCHPVIAYERICGEIKERPA
NHPRPKGRVKYEETVLKNYDARYGPHVAGYPADGESEYYKTDTIPAKPHG
VSGTPFPTPQSYQSGSGGVANNGYEATGSDGNTLSVPPYQTANNVQAPGP
GSSQEENTAKPMHKTSGSTANTGSTYKVNAQPNRSHGKTLKAKSDSMTGA
TGQEQAPGQQTSYGAGAAPVSPLPENGPSYRVVAQV*